rna10035, rna10035 (mRNA) Nannochloropsis gaditana

Overview
Namerna10035
Unique Namerna10035
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1367
Alignment locationKK037260.1:63471..63860 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100766g2.3156.mrna
Orig protein idgnl|cribi|Naga_100766g2.3156
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037260.1supercontigKK037260.1:63471..63860 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100766g2gene9737Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna10035rna10035-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM20668.1cds10004Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna10035 ID=rna10035|Name=rna10035|organism=Nannochloropsis gaditana|type=mRNA|length=1367bp
GGGGCAGGCTCACATCGGCTGCCTCTTCATGGTCGCATACATGATCATTT
TTTCAGCCATCACCTCCCTGGAGCTCTTCATTCAGGAACGCTCTCTCTTC
GTGCACGAGAAAACCAGCGGTTTCTACCGGACAAGCGCCTATTTCATCGC
CAAGATCCTATGTGAAATCCTCCCCACGCGGCTGGTGCCAACAATCTTCT
TCGCGCTCATCACCGCCTTCATGGCGGGTTTGCGGACAGACTTCTATCAC
CTGTTCATGTATTGGCTCACCCTGGCAGTCACGAGCATCACCTCCACCTC
CCTCTGCCTCCTCGTCTCTTGTGCCACCAGCGTCTATTCAGCCGCCTTCC
TCGGGTGCGGCGCTGTCTATCTCCTCTTCATGCTCGCCTCGGGATTCGTT
CTTCAAGCAGACCAAATTCCCAACTACCTAGCTCCCTTCAAGTACTTGTC
CTTCTACCGGTACTGTCTGCAGAACCTGCTCTCTTTGGATCTGAAAGGGC
GTGTCTTCGATTGCTATACGCCGGAGCAGCTTGCGGTGTCTGGCAAGGTG
GCCATTTGTCTGCCTACCGGCGATCTCTACCTTGAATCCCAAGGCATCAA
TCCGGACCACCTATGGATGAACATTGGGATCCTGGCCGCCATGATTCCTG
TTTATTTGGGCATTGCCTATCTCTTCCTCCGGTCTCTGAAGAAGAAGTCT
TAGACTGTGGGAAAAGGAGAGGATGGAAAGCGGAATTGTGCGCAGCCGGT
AGATGAGTTCCGGGATTTAAGATGTCATTTTTCGAGACAAAGTAAGCGGG
CACCATGTGAGGAAAGGCTATGGAAGGTGATGCTTCTCTCTTGGTCGCGT
GCGGGGCGCGTGCTCGTACTGGCAGCTTCTATGTGGCCGTGCAAAGAGAA
ATTGACAGAAATGGGATGTGTGGCTGCAGTAACACTTTGAGACTTCGTTT
TAAAGGGAATCTTTGGGTAAAAGGAAGGTTGTATTGCAGTCGATTCTTAG
TTTGAAAAGTACAAGATGTGCCCTTAAAGTTGGCGCCAGTAGATTAGACT
TGCTGGATTTCAACAGATTGAGATTCTTCGTCCTTGCCGCAGCTTACGGG
AAGTGGGATCGGATGAAAAGGAGCATGTCGAATATGCACAATAACACGGG
AGATCAAGTTGAATAGAGTTGACTAGGTTAAGGGTTACTTGCCATTCAAG
GGCTTACATATTATGACGTCAGAGGAACGTGGTAGGGTTTGTATCCTCGG
ATAAGTCTTCGAAAAATAAGTAAAATGTCTTCATAATGAAGCAGAGAGAG
ACGAGGAAAAGCAATATGAGACATGAGTTATGCATGCCAGCATGCCTCCT
TGACGAGTTCGCTTCCT
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protein sequence of rna10035

>rna10035-protein ID=rna10035-protein|Name=rna10035|organism=Nannochloropsis gaditana|type=polypeptide|length=89bp
MVFPQYIRQLETTPSLEPLRNPFSLALASSTQMPNNAVYVMENPSHHGLH
MKRGHKVCMSATITPYVCIKVKYQEELKQRGAPIQRATS
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mRNA from alignment at KK037260.1:63471..63860-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna10035 ID=rna10035|Name=rna10035|organism=Nannochloropsis gaditana|type=mRNA|length=390bp|location=Sequence derived from alignment at KK037260.1:63471..63860- (Nannochloropsis gaditana)
ATGGTCTTTCCCCAATACATCCGGCAAGTAAAGCATACGCACAGGCGGAG
GACGCCTGAAGAATTCATTTGTGCATCTATCCTACTTAGCTGTGTTGTCA
TTTCATTAGCTTGTGTGAGCTTCGTATCTTTAATCCTGCCCTAAAAGCTT
GAAACTACGCCCAGCCTCGAGCCACTCCGTAATCCATTTTCATTGGCTCT
GGCGTCTTCGACGCAAATGCCCAATAATGCAGTGTATGTTATGGAAAACC
CATCACATCATGGGCTACACATGAAACGAGGCCACAAAGTTTGTATGTCA
GCCACCATCACGCCGTATGTCTGCATCAAGGTAAAATATCAAGAAGAATT
AAAGCAAAGAGGCGCTCCGATACAAAGGGCAACTTCCTAA
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Coding sequence (CDS) from alignment at KK037260.1:63471..63860-

>rna10035 ID=rna10035|Name=rna10035|organism=Nannochloropsis gaditana|type=CDS|length=540bp|location=Sequence derived from alignment at KK037260.1:63471..63860- (Nannochloropsis gaditana)
CTTGAAACTACGCCCAGCCTCGAGCCACTCCGTAATCCATTTTCATTGGC
TCTGGCGTCTTCGACGCAAATGCCCAATAATGCAGTGTATGTTATGGAAA
ACCCATCACATCATGGGCTACACATGAAACGAGGCCACAAAGTTTGTATG
TCAGCCACCATCACGCCGTATGTCTGCATCAAGGTAAAATATCAAGAAGA
ATTAAAGCAAAGAGGCGCTCCGATACAAAGGGCAACTTCCTAAATGGTCT
TTCCCCAATACATCCGGCAACTTGAAACTACGCCCAGCCTCGAGCCACTC
CGTAATCCATTTTCATTGGCTCTGGCGTCTTCGACGCAAATGCCCAATAA
TGCAGTGTATGTTATGGAAAACCCATCACATCATGGGCTACACATGAAAC
GAGGCCACAAAGTTTGTATGTCAGCCACCATCACGCCGTATGTCTGCATC
AAGGTAAAATATCAAGAAGAATTAAAGCAAAGAGGCGCTCCGATACAAAG
GGCAACTTCCTAAATGGTCTTTCCCCAATACATCCGGCAA
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Synonyms
Publications