EWM20668.1, cds10004 (CDS) Nannochloropsis gaditana

Overview
NameEWM20668.1
Unique Namecds10004
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037260.1:63834..63860 -
Alignment locationKK037260.1:63471..63713 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20668.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100766g2.3156.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037260.1supercontigKK037260.1:63834..63860 -
KK037260.1supercontigKK037260.1:63471..63713 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM20668.1 vs. NCBI_GenBank
Match: gi|585100474|gb|EWM20668.1| (hypothetical protein Naga_100766g2 [Nannochloropsis gaditana])

HSP 1 Score: 187.193 bits (474), Expect = 2.932e-60
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0 
Query:    1 MVFPQYIRQLETTPSLEPLRNPFSLALASSTQMPNNAVYVMENPSHHGLHMKRGHKVCMSATITPYVCIKVKYQEELKQRGAPIQRATS 89
            MVFPQYIRQLETTPSLEPLRNPFSLALASSTQMPNNAVYVMENPSHHGLHMKRGHKVCMSATITPYVCIKVKYQEELKQRGAPIQRATS
Sbjct:    1 MVFPQYIRQLETTPSLEPLRNPFSLALASSTQMPNNAVYVMENPSHHGLHMKRGHKVCMSATITPYVCIKVKYQEELKQRGAPIQRATS 89
The following BLAST results are available for this feature:
BLAST of EWM20668.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100474|gb|EWM20668.1|2.932e-60100.00hypothetical protein Naga_100766g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10035rna10035Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications