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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100420g5.1552.mrna |
| Orig protein id | gnl|cribi|Naga_100420g5.1552 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037260.1 | supercontig | KK037260.1:49863..54512 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna10030 ID=rna10030|Name=rna10030|organism=Nannochloropsis gaditana|type=mRNA|length=1057bp
CCTCCTCCTCCCTACCTCCCTCCCTCCCTCCCTCCCTCTTTCCTCCCTCT
CCCTCTCCTTCCCTCCACCCCGCCTTCTCTTCTCCCTCACAGGGTTTGGT
CAGAGCTTGGATCTTCCGAGGACCCTGCCGGCGATAGTGCAGACGGGCGT
GGAAATCGCCAGGGAGGAGGTCATGATCCTTCACAGACCCGACCGGAGGG
GGAGACACGGACATCTCCCTTCTCCCCGGTCGAGACCTCGTCCCCCCCCC
CGTCCTCCCCCCCGCCCTCCCTCGCTACCTTGGCTCCAGGCAGGGAGGGA
GGGACCTCGGCGATGGCCGCCATGTTCCTGAGCAATACGGGGAGCAGGGA
GGAGGGGAAGAAGGAGGAAGGGGAGGAAGCCTGAGAGCGGCGGGGGCAAA
GCGCGCGTAAGGACGGAACGAGGATTTTAATTGCGGCCCCTCTGCGGCTG
GGAGGCCGCGCGTGTCGACACAGAGAAAAGGGGTGGGGGAGAAATGAGGG
AATGCGTGGATGGACGGTTCTCTGCCCTGTATAGAGACAGGTGGCGGGCA
GCAGGCCCCGCTGAACATCCCTCACGGCCTGGAGCCCGACGCACGTGGCA
TGTATATACAAAGGAAAGCCTAGAAGCCTCCGTCGAGAACATGCGCGACA
GAGGAGCGAGGCTTTGGATTCATGGAGAGATCCCAGGCTTGACGGCGACC
TTTGGCAAGGCTCGGGAGTGAGGAGGGAAGAAAGGGTTGATTTGAAAGTG
GGGAGAGGAAGGAACAAAAATGCCGTAGGCGCGTTTGGGAGACAATCGTT
AGGGTCTCACGGGAAATTATTTTCAAAGCATGAAATGTGTGAAGAAGTTT
GCGAGGAGAAGAGCAGCTGTGTGCATGTAGGTCCGAACGTTTTGTAGTCG
AGACCACTCGGCGGGAGCGCACGCTGTGTCGCCGTGGAAAATATTCAGCC
CCTTTAACATCAAATCAAAAAGAAAAGCACGACACGAACAGAGAAGCTTC
AGACGGGCATTCGTGGCATGGAAGAATCGGTGTGAACAGTGCTCGTTATT
GCCATGG back to topprotein sequence of rna10030 >rna10030-protein ID=rna10030-protein|Name=rna10030|organism=Nannochloropsis gaditana|type=polypeptide|length=216bp
MDRTVHKGLSSIFLIFFFFISCTRAFLLPLRFSTSSPSRVPSSTSSRPLS
SLTLDSLPLPSSTRCSTSISRRRHILFDFRTFATPREDSTPSNAITSLLV
RLGYQPEENDADPRSLRERLQDFGLAGVASYIASEVLFWFISLPVGIVAF
HQSTGEWLDLSTSDGQAKVAAFSAGFLTFARVALPLRAGVAFALAPALNK
YVIRPLVARGVLEDKE back to topmRNA from alignment at KK037260.1:49863..54512- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna10030 ID=rna10030|Name=rna10030|organism=Nannochloropsis gaditana|type=mRNA|length=4650bp|location=Sequence derived from alignment at KK037260.1:49863..54512- (Nannochloropsis gaditana)
CAGGGCTGCATTTGCGGGTGAATCGTGAGAAAGGGTGGGTGCTCGCGTGG
ATTCAGCCTTGAGACCTCCGCTAGCACCGACGTAATCCATCGAGGCACTC
CAAGCCCGGTAAAAATATGCACAAGCTTTCCGTGTTGCATTCTTACGTTG
GAGTGAGGACTTCTGGAAGAGTAAAGGCTTCACGCTTGGCTACTGCATTG
AAATGGTGACTCGTGTTTGGCTAAAAGTGCGGTTTCGTAGCTATTATACG
AGCATCACTCCTCCGTTCCTGCCATGGTAGCTCCCTCTCTTCTTTTCTCT
CCACTCATGTCTCTGAAATCAACCCTAACGACTCATAGGGTCGTCTCATA
CTTCCTGATAGCAGTCTTGGCACGGTAGCAATGGTAAGTGTAGCTCCCTC
GTGTCGATTTTCCTTCTTTCCTGTCCCACCCCTCGGGACGGACCCTGGCG
TCATACCACGCGCTCACCACCGCTTCTCCCCACTGCCGGCATTCAGGCGG
ACGAAGAGCCCGTCGACACAATGCCTGCGATCAGGGAGGCTGTCAAGCCC
AAATGTGCGGCCGATTGGAAAGACTACCAGGTGTGTGGGCAGGCCGTGAC
TCGGAGGGAGAGGACCCTTGCATGAATGGAAGAAGGACGTGTATCTCAGC
TGGCTGGAAGCCTTGGAAATGGCTGGATAACTCATGTGGGCCGATCTTAA
AAATGCTTTGAGAAACGGAGCCCTCTGTTGGTTTGAGAGGCGGTCTCGAT
GTAAAGCTGTCAGCTTCAGGGTTTAATGGGAGTCACGTCTTCTTCCCCCT
CTAATCCTCGAACCCCCCCTCGCTTTCTCTTTCCCTGCGACTTTCGTCAC
GGCACTCATGGACCTCTGAAATCCCGTCTTATGTGCTCCTTTCCTCACTC
CTCGCCATGCCCTCAGGGGTGCGTGTATCGAATCCAAAGTCGAGGCGATG
GGACTTGCGAGCCGCAATACATGGAGTGGCTGAAATGCATCGACAAGCAC
GTGCGTGGAACTTCCTTTCACTCTCCCTCCCTCCTCCCTCCCTTCTCTTA
ATCATCTTCCCCTGCTCGCGGTCCCTCCTCCACGGCGTCCGTCCACCCCC
CCCCCACTCGGACCGTTGTATCACCTTCCTGTGTCGTCTCTCCTATTCAC
ATGCCTTGCCCCTCTCTCCCATGTCTCTATCCCCACAGAGCGCAAAGCAA
GTTCTGAAAGTACTGAAATAGGAACGGTCGCGAGGGAGGGAGGGAGGGAA
GGTGGGAGGGAGGGCAGGGCAGGGAAATTGATTTTCCTATGTTTTTTCCT
GATGCTGAAGCGTATTTTGAATGAGGTTTATAAGTTCTAACTTAGTAGAG
GGTGTAGGGGAAGGCGTGGTCATGGCCTGGAGGGTGGAGGCACGAGGGGA
GAGAAGACGCGTTGGCAGTGGGAGGCGAGTGTAAGGATCGGCCGCTTTCT
GCACATGAGACAGAGCGAGGCTCCTTGCCTGAGGCAGGTCGAAGGCCTTC
CTTGGCCGTGAAGGGTGACTCGGGCGTGGTTGTGGACCGAGAAAGGGCGG
GAGAGAGAGGAGACGAGGCAGGGGGAAAGAGGCAGGGGGAAGAAGAAAAG
ATTGACTGAACACCACCGTTAGGGTTAAGGAGAGGAAGGCGAAGGAGAGG
CTCGGGGGAAAGGACGCGACGGATCTCCCGGAAACTCTCCTTCTCGTGTG
ACCTTGTCTATGGAGAACGCAACCCTAACCGTTACACTTTTTTTAATGTC
TTTTGACGCGGTCCTTTTAAACACGCCAACAACCCGCCCTGTGCACGCAG
GGAGGGGGAAAGGAGACCCCTCCAGCAACCTGAGAGAGTGCCTGCAAACC
CTTATCCAACCCTAACTCTAACCCTAACCCTAACCCTACACCAGACCCTA
ACCCTAGCCCTTGGGCTCTCAGGAGCGATTCCCGTGATCCCACGGACACA
CTACGCGGAGCCTGAACGCCTGCTTGTCGGGTAAAGATGCACGCTCAGAC
CTTTCTTGCACAAAAGGGCTCATAGCAATCGCTGGGTCACCTCATCCAAG
TCTGTAAAGAGCTCATGGCTCCGCAGCACTAAGGCCTTCCGCCTCCGCCT
CACCTCCTCGTCCCCCCGGACACTGTCCAGGTGCCCCATCGCCTTCTCCA
AATCGCTCTGTAATTCACCCACTTCCGTCCTCACCTGTCCTAGCGTCGGC
CTCTTCTTTTCTTTCCCTCCCTCCCTCTCCCCCTCCCTCCCTCCCTCCTT
CCTTCCTTCCCTCCTTCCTTCCACGCTCCTCCCCTCGCGCCCTATTTGGC
CGTTCGCCTCTCCTCCTTCCTCCTCTTCGCTTCCTTCTCTCCCCTCTCCG
CCTCCCAGCTTCTCTTCCCCGTTCCCTTCCCTCTTTTCCTCTTGTTCCAG
CCTTTCTAATTCCCTCTCAACGTCGTACTCATCCCACTTGTTCTTGAATT
TCCTCCCCGACGAACTGAAGTGATAATACGCGCTGGTGGACGCTGCGCTC
TCCCCCTCCTCCTTCTCTCCCTCTCTTCTCCCCCCCTCCTCCTCCTCTTC
ATCTCTGCCCTCCTCCTCCTTCCTCAGTGCCTTGTTCGTGCGCTCCCGCG
CCCGTTCGATCCGATCTGCCAACGAGGTCAACTCTGCCCTCAAAAACTTG
AGCTGTCGGAGGGCTACTCTTTTCCTCGCCTTGTCTCTGTCGCCTTCCCA
TATGTATGTGAGAGTAGCACGTCCTGAAGAGGTGAGGGTCAGCCAGCCTA
TAGCAGCGAGGAGGAGGAAGGAGGTGCTTGTAGCTGTTGAGGGGAAGCGC
ATGTCTAGGCTACTGGGATGGATAAGGGGAAAGCGTGAGCAGAAAAGAGA
TGGCAAGCTGAGCGCGAGACCGTAAGACCACTTAAATATGATGGCCAGCG
ATTGAAAGCCCACGGTAGAGGCTGCGGTGTCGCTTGCATGTGAGTGGGTA
CAAGCCAGTATCGCACGGGTCAGCAGGACCGTGTCTATGCGGATGAACGA
CGCTCTTGTAAAATCACGAAAGGGCTGGTGCTCCACCTCTAGAGTCCAAG
ACAATCATGTCGGAGGTTTTGTTTGGGTGTCTTTGTGCCAATGGATAGAG
TTAACGTAGTTTCAGCCCTTTTTTCTGCTCCGTGTTGGTGTAGTCGCAGG
ACCGTTAAGATGAGGGGCAGGAGGTTGTTCGAGAGCCTATGGCCCTTTTG
GTGTGACGATAAATTTCAAGCATGACAGTGCATCGCCTTTCTGGAAATAC
GTCTGCTTCATTCAGTGAGAGAATGTACATGCAGACTGTCAGCCATGGCC
TTTGGGATTTTTGGCTTTCTTTCGTTTGAAGGCGGTTTGACTGCACGATC
CTGATACTCCTTGTTGTTCTACATCTACCACTTTCATGTGTCACCATCTC
TGTCCTGCCCTCGCGCTCATTACACACCTTCTCTTTTCAAATTAATCCTT
GCAACATCCACATTTAGGTTCCGGCTCGGGCGGGGAGGGTCCTTTCGTTC
TGCCACTGGCGGTGCACCGCTCAAACAGCCCTCCTGACTGAGACTCATCC
TTACTGAGAGGCGTCAAATCCCCTTTGTGATGGACCGAACAGTCCACAAG
GGCCTTTCAAGCATCTTCCTGATATTTTTCTTCTTCATCTCATGCACACG
AGCCTTCCTTCTCCCGCTACGCTTCTCTACCTCCTCGCCCTCTCGTGTCC
CTTCCTCCACGTCCTCCCGGCCACTATCCTCTCTCACGCTCGATAGCCTC
CCGCTCCCCTCAAGCACACGCTGCAGCACCAGCATCTCAAGAAGACGACA
CATTTTGTTCGATTTCCGCACTTTTGCGACGCCGCGGGAGGATTCCACTC
CTTCCAACGCCATCACCTCCCTCCTCGTTCGCCTTGGCTACCAGCCAGAG
GAGAACGACGCGGACCCACGGTCCCTCCGCGAGCGACTGCAAGATTTTGG
GCTGGCAGGTGTTGCGTCCTACATTGCGTCTGAGGTGTTGTTCTGGTTTA
TCTCCTTGCCAGTAGGGATCGTCGCCTTCCATCAAAGCACGGGGGAGTGG
CTGGATTTGAGCACGAGTGACGGGCAAGCAAAGGTGAGACATCCATTACA
GGAGAGGACAATGATCCCAAATGGCTTCCGTGACGGTTGCGTTCCATTTG
CATCCCTCGTCCTATCGTGGCTGCAGGGTTTTCTGTGCGAGCGCGCGGAG
AATTGCGGCCTTCTCTGACCCCGTGCTCGCCCTCCATCCGCGTCCTCCCC
TTTCATACGACAAATCAGGTAGCAGCTTTTTCTGCAGGCTTCCTCACCTT
TGCTCGTGTCGCGCTCCCCCTGCGTGCTGGCGTTGCCTTCGCCCTTGCCC
CTGCACTTAATAAGTATGTGATTCGACCCTTGGTGGCCAGGGGCGTGCTA
GAAGATAAGGAATGAGGACGAAAAGCGGAGGGGAGCAGAGGGAACCGTGA
GTCGATAGTTGCAATGTGTGCCGTGGGCTCGAAGGGGAGCAGAGGGAACC
GTGAGTCGATTGTTACAAAGTGTGCCGTGGGCTTTGATGGGAATCGAGGG
ACTTGACGATAGTGGCAGGTGGAAGGAAAATAAGTTCTTAATCCGGCAAA
ATCAACGTTGCACCCTAAATTCTTTGAGGCAAATTCAGATCGAATGTTGA
back to topCoding sequence (CDS) from alignment at KK037260.1:49863..54512- >rna10030 ID=rna10030|Name=rna10030|organism=Nannochloropsis gaditana|type=CDS|length=1302bp|location=Sequence derived from alignment at KK037260.1:49863..54512- (Nannochloropsis gaditana)
GTAGCAGCTTTTTCTGCAGGCTTCCTCACCTTTGCTCGTGTCGCGCTCCC
CCTGCGTGCTGGCGTTGCCTTCGCCCTTGCCCCTGCACTTAATAAGTATG
TGATTCGACCCTTGGTGGCCAGGGGCGTGCTAGAAGATAAGGAATGAATG
GACCGAACAGTCCACAAGGGCCTTTCAAGCATCTTCCTGATATTTTTCTT
CTTCATCTCATGCACACGAGCCTTCCTTCTCCCGCTACGCTTCTCTACCT
CCTCGCCCTCTCGTGTCCCTTCCTCCACGTCCTCCCGGCCACTATCCTCT
CTCACGCTCGATAGCCTCCCGCTCCCCTCAAGCACACGCTGCAGCACCAG
CATCTCAAGAAGACGACACATTTTGTTCGATTTCCGCACTTTTGCGACGC
CGCGGGAGGATTCCACTCCTTCCAACGCCATCACCTCCCTCCTCGTTCGC
CTTGGCTACCAGCCAGAGGAGAACGACGCGGACCCACGGTCCCTCCGCGA
GCGACTGCAAGATTTTGGGCTGGCAGGTGTTGCGTCCTACATTGCGTCTG
AGGTGTTGTTCTGGTTTATCTCCTTGCCAGTAGGGATCGTCGCCTTCCAT
CAAAGCACGGGGGAGTGGCTGGATTTGAGCACGAGTGACGGGCAAGCAAA
GGTAGCAGCTTTTTCTGCAGGCTTCCTCACCTTTGCTCGTGTCGCGCTCC
CCCTGCGTGCTGGCGTTGCCTTCGCCCTTGCCCCTGCACTTAATAAGTAT
GTGATTCGACCCTTGGTGGCCAGGGGCGTGCTAGAAGATAAGGAATGAAT
GGACCGAACAGTCCACAAGGGCCTTTCAAGCATCTTCCTGATATTTTTCT
TCTTCATCTCATGCACACGAGCCTTCCTTCTCCCGCTACGCTTCTCTACC
TCCTCGCCCTCTCGTGTCCCTTCCTCCACGTCCTCCCGGCCACTATCCTC
TCTCACGCTCGATAGCCTCCCGCTCCCCTCAAGCACACGCTGCAGCACCA
GCATCTCAAGAAGACGACACATTTTGTTCGATTTCCGCACTTTTGCGACG
CCGCGGGAGGATTCCACTCCTTCCAACGCCATCACCTCCCTCCTCGTTCG
CCTTGGCTACCAGCCAGAGGAGAACGACGCGGACCCACGGTCCCTCCGCG
AGCGACTGCAAGATTTTGGGCTGGCAGGTGTTGCGTCCTACATTGCGTCT
GAGGTGTTGTTCTGGTTTATCTCCTTGCCAGTAGGGATCGTCGCCTTCCA
TCAAAGCACGGGGGAGTGGCTGGATTTGAGCACGAGTGACGGGCAAGCAA
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