EWM20675.1, cds9999 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20675.1 vs. NCBI_GenBank
Match: gi|553186614|ref|XP_005854453.1| (hypothetical protein NGA_0210500 [Nannochloropsis gaditana CCMP526] >gi|422294606|gb|EKU21906.1| hypothetical protein NGA_0210500 [Nannochloropsis gaditana CCMP526] >gi|585100486|gb|EWM20675.1| hypothetical protein Naga_100420g5 [Nannochloropsis gaditana]) HSP 1 Score: 427.557 bits (1098), Expect = 2.725e-151 Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0
Query: 1 MDRTVHKGLSSIFLIFFFFISCTRAFLLPLRFSTSSPSRVPSSTSSRPLSSLTLDSLPLPSSTRCSTSISRRRHILFDFRTFATPREDSTPSNAITSLLVRLGYQPEENDADPRSLRERLQDFGLAGVASYIASEVLFWFISLPVGIVAFHQSTGEWLDLSTSDGQAKVAAFSAGFLTFARVALPLRAGVAFALAPALNKYVIRPLVARGVLEDKE 216
MDRTVHKGLSSIFLIFFFFISCTRAFLLPLRFSTSSPSRVPSSTSSRPLSSLTLDSLPLPSSTRCSTSISRRRHILFDFRTFATPREDSTPSNAITSLLVRLGYQPEENDADPRSLRERLQDFGLAGVASYIASEVLFWFISLPVGIVAFHQSTGEWLDLSTSDGQAKVAAFSAGFLTFARVALPLRAGVAFALAPALNKYVIRPLVARGVLEDKE
Sbjct: 1 MDRTVHKGLSSIFLIFFFFISCTRAFLLPLRFSTSSPSRVPSSTSSRPLSSLTLDSLPLPSSTRCSTSISRRRHILFDFRTFATPREDSTPSNAITSLLVRLGYQPEENDADPRSLRERLQDFGLAGVASYIASEVLFWFISLPVGIVAFHQSTGEWLDLSTSDGQAKVAAFSAGFLTFARVALPLRAGVAFALAPALNKYVIRPLVARGVLEDKE 216
BLAST of EWM20675.1 vs. NCBI_GenBank
Match: gi|299115993|emb|CBN75994.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 114.005 bits (284), Expect = 4.522e-28 Identity = 53/124 (42.74%), Postives = 83/124 (66.94%), Query Frame = 0
Query: 88 DSTPSNAITSLLVRLGYQ--PEENDADPRSLRERLQDFGLAGVASYIASEVLFWFISLPVGIVAFHQSTGEWLDLSTSDGQAKVAAFSAGFLTFARVALPLRAGVAFALAPALNKYVIRPLVAR 209
D N++ LV G + P E + D +E+++ GLAG +Y +E+ FW IS+P+ +V +HQ+TGEWLDL+T +G+ K+ +AGFLTFAR+ +PLR +A AL PA++KYV++ L+ +
Sbjct: 65 DEEEMNSLDKALVAWGVKSPPGEPEID---FKEKIKSAGLAGALAYGGTELAFWIISVPLAVVGYHQTTGEWLDLTTLEGKEKLFGLTAGFLTFARLVVPLRIALALALTPAMDKYVVKGLLNK 185
BLAST of EWM20675.1 vs. NCBI_GenBank
Match: gi|1210531906|dbj|GAX09334.1| (hypothetical protein FisN_6Lh297 [Fistulifera solaris]) HSP 1 Score: 89.3521 bits (220), Expect = 1.172e-18 Identity = 40/98 (40.82%), Postives = 63/98 (64.29%), Query Frame = 0
Query: 106 PEENDADPRSLRERLQDFGLAGVASYIASEVLFWFISLPVGIVAFHQSTGEWLDLSTSDGQAKVAAFSAGFLTFARVALPLRAGVAFALAPALNKYVI 203
P D +P ++ ++++D G AG+ SY E+ FWFIS+P + A+ Q+TG W DLS ++ AK+ A + F+ FAR A+PLR G+A + P + K V+
Sbjct: 79 PLTEDKNPANMMQQIKDAGKAGIISYALWELGFWFISIPFCLFAYQQATGHWPDLSNAEDTAKLGAEAFAFVNFARFAVPLRIGLALSTTPWIQKNVV 176
BLAST of EWM20675.1 vs. NCBI_GenBank
Match: gi|1210519052|dbj|GAX22050.1| (hypothetical protein FisN_6Hh297 [Fistulifera solaris]) HSP 1 Score: 88.9669 bits (219), Expect = 1.366e-18 Identity = 50/143 (34.97%), Postives = 80/143 (55.94%), Query Frame = 0
Query: 69 ISRRRHILFD-FRTFATPREDSTPSNAITSLLVRLGYQ-------PEENDADPRSLRERLQDFGLAGVASYIASEVLFWFISLPVGIVAFHQSTGEWLDLSTSDGQAKVAAFSAGFLTFARVALPLRAGVAFALAPALNKYVI 203
++R R L D +T + +S + ++TS L Q P D +P ++ ++++D G AG+ SY E+ FWFIS+P + A+ Q+TG W DLS + AK+ A + F+ FAR A+PLR G+A + P + K V+
Sbjct: 31 VTRTRLALADPSQTMESSNNNSQSAPSVTSSLGGEYMQRTAIETPPPAEDKNPANMMQQIKDAGKAGIISYALWELGFWFISIPFCLFAYQQATGHWPDLSNPEDTAKLGAEAFAFVNFARFAVPLRIGLALSTTPWIQKNVV 173
BLAST of EWM20675.1 vs. NCBI_GenBank
Match: gi|873224200|emb|CEM26925.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 87.4261 bits (215), Expect = 1.800e-16 Identity = 53/147 (36.05%), Postives = 77/147 (52.38%), Query Frame = 0
Query: 73 RHILFDFRTFATPREDSTPSNAITSLLVRLGY--------QPEENDADPRSLRERLQDFGLAGVASYIASEVLFWFISLPVGIVAFHQSTGEWLDLSTSDGQAKVAAFSAGFLTFARVALPLRAGVAFALAPALNKYVIRPLVARGV 211
RH+ FR PR ST + ++ + R + E+ D L E++++ G+AGV SY A+EV FW SLP+ I AF + G D++ + AKVA +SAGFL+ AR +PLR A AL P + KY+ +G
Sbjct: 39 RHLPPRFRL---PRRSSTRRSGMSEQMARKQEALNATAEREAEQQLWDREKLTEKIKEAGVAGVISYGATEVAFWLTSLPLAIAAFLATFGAIPDMANGEDAAKVAVYSAGFLSIARALVPLRIAAALALTPLVGKYIKAAQTEKGA 182
BLAST of EWM20675.1 vs. NCBI_GenBank
Match: gi|224000900|ref|XP_002290122.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220973544|gb|EED91874.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 80.8777 bits (198), Expect = 3.045e-14 Identity = 36/99 (36.36%), Postives = 60/99 (60.61%), Query Frame = 0
Query: 112 DPRSLRERLQDFGLAGVASYIASEVLFWFISLPVGIVAFHQSTGEWLDLSTSDGQAKVAAFSAGFLTFARVALPLRAGVAFALAPALNKYVIRPLVARG 210
+ + L ++++ G AG SY E+ FW +SLPV +V + Q TG W D S S+ KV A + F+ FAR+A+PLR G+A + +++ V++ + +G
Sbjct: 395 ETQKLLQKVKQAGTAGAISYALWELAFWGVSLPVCVVGYKQLTGHWPDFSNSEDMQKVGAEAFAFVNFARLAVPLRIGLALSTTQWIDENVVQKFMKKG 493
BLAST of EWM20675.1 vs. NCBI_GenBank
Match: gi|551560255|ref|XP_005767026.1| (hypothetical protein EMIHUDRAFT_461524 [Emiliania huxleyi CCMP1516] >gi|485617422|gb|EOD14597.1| hypothetical protein EMIHUDRAFT_461524 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 78.1814 bits (191), Expect = 5.421e-14 Identity = 44/129 (34.11%), Postives = 70/129 (54.26%), Query Frame = 0
Query: 87 EDSTPSNAITS---------LLVRLGYQPEENDADPRS---LRERLQDFGLAGVASYIASEVLFWFISLPVGIVAFHQSTGEWLDLSTSDGQAKVAAFSAGFLTFARVALPLRAGVAFALAPALNKYVI 203
ED+ P + S LLV+LG + E+ P L E+++ G AG+ SY+ E +FW + + V ++Q+TG W DLS D QAKV A + + AR A+PLR G+A + P +++ ++
Sbjct: 82 EDAMPEPVVLSEKKLTAADKLLVKLGVKTEDECVVPEEGEDLMEQIKCAGRAGIVSYVIWEWIFWIGAGGIAAVTYYQATGGWPDLSNPDDQAKVGASAFALVNVARFAVPLRIGLALSTTPWVDENIV 210
BLAST of EWM20675.1 vs. NCBI_GenBank
Match: gi|551561626|ref|XP_005767642.1| (hypothetical protein EMIHUDRAFT_119413 [Emiliania huxleyi CCMP1516] >gi|485618164|gb|EOD15213.1| hypothetical protein EMIHUDRAFT_119413 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 77.411 bits (189), Expect = 7.999e-14 Identity = 44/129 (34.11%), Postives = 70/129 (54.26%), Query Frame = 0
Query: 87 EDSTPSNAITS---------LLVRLGYQPEENDADPRS---LRERLQDFGLAGVASYIASEVLFWFISLPVGIVAFHQSTGEWLDLSTSDGQAKVAAFSAGFLTFARVALPLRAGVAFALAPALNKYVI 203
ED+ P + S LLV+LG + E+ P L E+++ G AG+ SY+ E +FW + + V ++Q+TG W DLS D QAKV A + + AR A+PLR G+A + P +++ ++
Sbjct: 79 EDAMPEPVVLSEKKLTAADKLLVKLGVKTEDECVVPEEGEDLMEQIKCAGRAGIISYVIWEWIFWIGAGGIAAVTYYQATGGWPDLSNPDDQAKVGASAFALVNVARFAVPLRIGLALSTTPWVDENIV 207
BLAST of EWM20675.1 vs. NCBI_GenBank
Match: gi|219112411|ref|XP_002177957.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410842|gb|EEC50771.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 75.8702 bits (185), Expect = 1.268e-13 Identity = 37/93 (39.78%), Postives = 57/93 (61.29%), Query Frame = 0
Query: 111 ADPRSLRERLQDFGLAGVASYIASEVLFWFISLPVGIVAFHQSTGEWLDLSTSDGQAKVAAFSAGFLTFARVALPLRAGVAFALAPALNKYVI 203
++ + L ++++D G AG+ SY EV FW +S+PV I + TG W DLS +D AK+ A + F+ FAR A+PLR G+A + P + V+
Sbjct: 85 SEAQKLMQQVKDAGTAGIISYALWEVAFWTVSIPVVIFGYIGVTGHWPDLSDNDDIAKMGAEAFAFVNFARFAVPLRIGLALSTTPWIQNNVV 177
BLAST of EWM20675.1 vs. NCBI_GenBank
Match: gi|551661962|ref|XP_005833747.1| (hypothetical protein GUITHDRAFT_70348 [Guillardia theta CCMP2712] >gi|428177889|gb|EKX46767.1| hypothetical protein GUITHDRAFT_70348 [Guillardia theta CCMP2712]) HSP 1 Score: 72.0182 bits (175), Expect = 3.862e-13 Identity = 33/78 (42.31%), Postives = 48/78 (61.54%), Query Frame = 0
Query: 119 RLQDFGLAGVASYIASEVLFWFISLPVGIVAFHQSTGEWLDLSTSDGQAKVAAFSAGFLTFARVALPLRAGVAFALAP 196
+++D G+AG+ +Y E +FW IS+P I A+HQ+TGEW + AKV+A GFL AR +P+R + A AP
Sbjct: 3 KVKDAGVAGLVAYAIWEFIFWAISVPTAIFAYHQTTGEWPSFDNPESTAKVSAVIFGFLNVARALVPVRIAITLATAP 80 The following BLAST results are available for this feature:
BLAST of EWM20675.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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