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Properties
| Property Name | Value |
|---|
| Product | phospholipid-translocating p-type atpase domain containing protein |
| Orig transcript id | gnl|cribi|Naga_101182g1.3152.mrna |
| Orig protein id | gnl|cribi|Naga_101182g1.3152 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037260.1 | supercontig | KK037260.1:40449..42858 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna10028 ID=rna10028|Name=rna10028|organism=Nannochloropsis gaditana|type=mRNA|length=969bp
TCCCTCCCGTCCTCCCTACTTCGTCGCCCGTACAGGGGGACTACTCCCTG
CGAATCGACGACCTGCCCCCCATGAAAGCCGTAGATCTGGATCTGGCCTT
GTGCCACACCACTCAGGGGACCCTCCAGGTCCGCCTCCTCTACCATCCCG
TGCAGCGGCCGGAGGAAAAGACGGAAGACCACGCTGTGTCAGAGGATCTG
GCGGCGCTTGAGGAGGAACTAGCGACAGGGTCGCTGTGGGCCGATGCGGA
CGTCCACGACAAGGAAGAAGGAAAAGGAGAAGGAGAGGAGACGTCGACGG
GGGCCGTGGAGGGCGCTAGGGGAGGGCAGAGAGGCATCTTGACGGTGGAG
GGGTTGCAATTGACGGGGTATACGTCCAAGGACACGTTTTGGGGCGGCTC
GAAGGTTTTCATCCGCCTTGCCCTCGGCACGTCAATCGTTCGCACCGTTC
CCGAAAGAACACCCTGCCAGGACCCTGCTTTTCTCGACCAGTTTACCTTC
AATATTGACGACAGGGTTCGCGGCACCAGCTTGGACGTGACCATCATCGA
AAACCGCGCCCTGGGCCCCGCCAAATTCCTGGGACGAGCTTCCATAAACC
TTTCCACCTTTACTCGGCGCCCGGGGAAGACAGAGGCGGACTGGCCCGTC
TACCTGAAGGGGAAAGTGGTGCATGTTCACATCCGTGCCTATTTCTCCCC
TCTGATGTCCCAAGAGGCGTCGTGAAGGATGCGTACTGCGCATATTGTGG
CTTTCAGCGGACGGAAAATGTGCGTTGATGACAAAATGGGGTGGCACTCG
ATTTATGTTTCTGCAAGGGGTTGGGTGGTTGTGGAAAAAGGTTGAGGTAG
CAATTTTGGGTAGAACACGGGCGTCTAGGGTACCGAAGAATCAACATGCG
TTCCATCAGACTTAATTGGCTAGACCAAACTGAAAAAGAAATTTTTATAA
CGACGGGATGAGTTTAAGG back to topprotein sequence of rna10028 >rna10028-protein ID=rna10028-protein|Name=rna10028|organism=Nannochloropsis gaditana|type=polypeptide|length=256bp
MDKIESNFELLGATAIEDKLQEGVPETIHDLTRAGIKVWMLTGDKEETAV
NIGVACNLLEHSTKMRRISINSEKCQNEHHVQYLLKYELQKFKDDFEKHQ
DNCKPRALVIDGPTLMLASKEGVRRRLLKLTRICKSVVACRVSPDQKRSI
VHLVKNNEPACRALSIGDGANDVPMIQEAHVGVGIAGMEGMQAVNASDYA
ISQFRFLRSLLLAHGRWNYRRMAFIVAYIFYKNIIQSISQFFFAFWCLPC
ALLSIE back to topmRNA from alignment at KK037260.1:40449..42858+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna10028 ID=rna10028|Name=rna10028|organism=Nannochloropsis gaditana|type=mRNA|length=2410bp|location=Sequence derived from alignment at KK037260.1:40449..42858+ (Nannochloropsis gaditana)
ATGGACAAAATCGAGAGCAACTTTGAACTGCTGGGAGCGACTGCCATCGA
AGACAAACTTCAGGtagagaaggcgggagggaggagggaaggggggaggg
agggagtgggaatAGCATTGGAAGGGGGCTTTCTAATACAGTTCCCTGGC
ACCCTACAGGAGGGCGTCCCGGAGACGATCCACGACCTGACACGCGCAGG
CATCAAGGTGAATATTTTGTGCTTATCCATCCTTGTTTCCGCCATGACCG
GGGCCTACAATGTTTTTCATAGCCAAGAGTGTGCAAGCTGGCTTGTGGAG
GACACGTCCACGCAGGGCCCCAAGCGAGCCCCTGAGCCCTCTCGccgtca
tcttcctccctctcttgttCTCCTTTCGCTGGGAGGTGGAGTTTTCATCG
TGACCGTATCGCCCGCCCATGTCCCGCCTCTCTTGGTGGCGCCTTGGTCG
TGGATGTTTCCTTTCTTGTCTGGATCATTACTGATTGGGAAGTTTTCTTT
GGCAGTATCGCCGCCGCGCCAGgatttttccccctccagtTTTTGGTTTC
CGTCCATGAAAAGGAACTTGGCTGCTTTCCTTTGGAGAATTCCTAATTTG
GATCTCGTTTGCTTTCCAcatcgccctcctgcctgctttcctcccgttcc
cccaccctcccagGTGTGGATGCTCACGGGCGACAAAGAGGAAACGGCCG
TCAACATCGGTGTGGCTTGCAACCTTCTCGAACATTCCACGAAGGTAACG
ATTTCTCAGCCGTGCTCGTGTCTTGTCTGACCCCCATACTTCTTTCCGTT
CGTGGCGGGGATCATGTTCCTGCGAGGGGTGAAGGTCAATACGTTGTGGC
TCTGTGTTATCGTCCTTTTCTAATTTGCCTGTCATTTCTGCACTCATTTT
GGCACTTATCCGCTGACGCCTGTCCCGTCTCTTCGCCTACCTAAGATGCG
CCGCATCTCTATCAACTCAGAGAAATGTCAAAACGAGCACCATGTCCAGT
ACCTGCTTAAGTACGAGCTGCAAAAATTCAAGGTAAtgccgtctctccct
ccttccctctcgcctccctcccggcctcccgccctccctcccaaaacCGA
GCCGTCCACcccacttttcctccccattAACCCCccactcttcctctttc
ctgcccctcccctccctcgccgggCCCACGTTCCCTCCACCAGGACGATT
TCGAGAAGCACCAAGACAACTGCAAGCCTCGGGCGCTCGTCATTGACGGC
CCCACCCTCATGCTGGCCTCTAAGGAGGGCGTCCGTCGGCGCCTTTTGAA
GCTGACCAGGGTAAGGCCCacgcgagggcggggcgggagggagggcggga
gggagggcggggtagTTGTCCCGCCCGGGCCGGGTGGCCGGCGAGATCAC
GGAGGCCTGCCCCCAGGGGGCTGCCTGGGGTCGACAATGCGATCAGGTCG
ATCCGTGGCAAGCCTACACTCCCACATCCTGCCTCACCCTGGAtggcgcc
ctccccgtcctcctccccccttctctctctcaccCCAACGCCCAGATATG
CAAGTCGGTGGTGGCTTGCCGCGTCTCCCCGGACCAGAAACGCTCCATCG
TCCACCTGGTCAAGAACAACGAGCCGGCCTGTCGGGCCCTCTCCATTGGT
AAggcagaagagagagagggagggagggaaggagggcgaaaggaaggggg
gaggggcaaagtGAAGGGGAGATCTGGCAACCCTGTTTCCGCTCTTCCTT
TGTAATCGGATGTGCATACACTGATATCGCCGCGGAATAAATGCAGGAGA
CGGCGCGAACGACGTACCGATGATACAGGAGGCGCACGTCGGCGTGGGCA
tcgcggggatggaggggatgcaggtagggaagaagggagggagagaggga
gaaagggagggacgcagcgagggaggcagagggcaAAGCACGGAGTTGAA
CCAGATCCGAGTACTACGCTAAAAGTGATGACGTGTCCATCAACAAGACA
CCGTCACTTCtcactcttcctccctccccccctccctccctccctccctc
cctccctccctccctcttacgACCTTCCCCCGTGGCCCAGGCGGTCAACG
CCTCCGACTACGCCATCTCCCAgtttcgcttcctccgctccctccttctc
gcgcaCGGCCGGTGGAATTATCGACGCATGGCGTTCATTGTCGCGTACAT
TTTTTACAAGAACATCATCCAGTCCATCTCCCAATTCTTTTTCGCTTTTT
GGTGCGtgggcttccctccctccctcccttcctccctccccccctccctc
cctcccttcatccccttgTCTTCTCGGCCTTCGTTTGTTTGccacctttt
ccccctgtacaacctcctctgcccctccagctGCCATGTGCCCTGCTGTC
CATCGAGTAG back to topCoding sequence (CDS) from alignment at KK037260.1:40449..42858+ >rna10028 ID=rna10028|Name=rna10028|organism=Nannochloropsis gaditana|type=CDS|length=6939bp|location=Sequence derived from alignment at KK037260.1:40449..42858+ (Nannochloropsis gaditana)
ATGGACAAAATCGAGAGCAACTTTGAACTGCTGGGAGCGACTGCCATCGA
AGACAAACTTCAGGAGGGCGTCCCGGAGACGATCCACGACCTGACACGCG
CAGGCATCAAGGTGTGGATGCTCACGGGCGACAAAGAGGAAACGGCCGTC
AACATCGGTGTGGCTTGCAACCTTCTCGAACATTCCACGAAGATGCGCCG
CATCTCTATCAACTCAGAGAAATGTCAAAACGAGCACCATGTCCAGTACC
TGCTTAAGTACGAGCTGCAAAAATTCAAGGACGATTTCGAGAAGCACCAA
GACAACTGCAAGCCTCGGGCGCTCGTCATTGACGGCCCCACCCTCATGCT
GGCCTCTAAGGAGGGCGTCCGTCGGCGCCTTTTGAAGCTGACCAGGATAT
GCAAGTCGGTGGTGGCTTGCCGCGTCTCCCCGGACCAGAAACGCTCCATC
GTCCACCTGGTCAAGAACAACGAGCCGGCCTGTCGGGCCCTCTCCATTGG
AGACGGCGCGAACGACGTACCGATGATACAGGAGGCGCACGTCGGCGTGG
GCAtcgcggggatggaggggatgcagGCGGTCAACGCCTCCGACTACGCC
ATCTCCCAgtttcgcttcctccgctccctccttctcgcgcaCGGCCGGTG
GAATTATCGACGCATGGCGTTCATTGTCGCGTACATTTTTTACAAGAACA
TCATCCAGTCCATCTCCCAATTCTTTTTCGCTTTTTGGTGCctGCCATGT
GCCCTGCTGTCCATCGAGTAGATGGACAAAATCGAGAGCAACTTTGAACT
GCTGGGAGCGACTGCCATCGAAGACAAACTTCAGGAGGGCGTCCCGGAGA
CGATCCACGACCTGACACGCGCAGGCATCAAGGTGTGGATGCTCACGGGC
GACAAAGAGGAAACGGCCGTCAACATCGGTGTGGCTTGCAACCTTCTCGA
ACATTCCACGAAGATGCGCCGCATCTCTATCAACTCAGAGAAATGTCAAA
ACGAGCACCATGTCCAGTACCTGCTTAAGTACGAGCTGCAAAAATTCAAG
GACGATTTCGAGAAGCACCAAGACAACTGCAAGCCTCGGGCGCTCGTCAT
TGACGGCCCCACCCTCATGCTGGCCTCTAAGGAGGGCGTCCGTCGGCGCC
TTTTGAAGCTGACCAGGATATGCAAGTCGGTGGTGGCTTGCCGCGTCTCC
CCGGACCAGAAACGCTCCATCGTCCACCTGGTCAAGAACAACGAGCCGGC
CTGTCGGGCCCTCTCCATTGGAGACGGCGCGAACGACGTACCGATGATAC
AGGAGGCGCACGTCGGCGTGGGCAtcgcggggatggaggggatgcagGCG
GTCAACGCCTCCGACTACGCCATCTCCCAgtttcgcttcctccgctccct
ccttctcgcgcaCGGCCGGTGGAATTATCGACGCATGGCGTTCATTGTCG
CGTACATTTTTTACAAGAACATCATCCAGTCCATCTCCCAATTCTTTTTC
GCTTTTTGGTGCctGCCATGTGCCCTGCTGTCCATCGAGTAGATGGACAA
AATCGAGAGCAACTTTGAACTGCTGGGAGCGACTGCCATCGAAGACAAAC
TTCAGGAGGGCGTCCCGGAGACGATCCACGACCTGACACGCGCAGGCATC
AAGGTGTGGATGCTCACGGGCGACAAAGAGGAAACGGCCGTCAACATCGG
TGTGGCTTGCAACCTTCTCGAACATTCCACGAAGATGCGCCGCATCTCTA
TCAACTCAGAGAAATGTCAAAACGAGCACCATGTCCAGTACCTGCTTAAG
TACGAGCTGCAAAAATTCAAGGACGATTTCGAGAAGCACCAAGACAACTG
CAAGCCTCGGGCGCTCGTCATTGACGGCCCCACCCTCATGCTGGCCTCTA
AGGAGGGCGTCCGTCGGCGCCTTTTGAAGCTGACCAGGATATGCAAGTCG
GTGGTGGCTTGCCGCGTCTCCCCGGACCAGAAACGCTCCATCGTCCACCT
GGTCAAGAACAACGAGCCGGCCTGTCGGGCCCTCTCCATTGGAGACGGCG
CGAACGACGTACCGATGATACAGGAGGCGCACGTCGGCGTGGGCAtcgcg
gggatggaggggatgcagGCGGTCAACGCCTCCGACTACGCCATCTCCCA
gtttcgcttcctccgctccctccttctcgcgcaCGGCCGGTGGAATTATC
GACGCATGGCGTTCATTGTCGCGTACATTTTTTACAAGAACATCATCCAG
TCCATCTCCCAATTCTTTTTCGCTTTTTGGTGCctGCCATGTGCCCTGCT
GTCCATCGAGTAGATGGACAAAATCGAGAGCAACTTTGAACTGCTGGGAG
CGACTGCCATCGAAGACAAACTTCAGGAGGGCGTCCCGGAGACGATCCAC
GACCTGACACGCGCAGGCATCAAGGTGTGGATGCTCACGGGCGACAAAGA
GGAAACGGCCGTCAACATCGGTGTGGCTTGCAACCTTCTCGAACATTCCA
CGAAGATGCGCCGCATCTCTATCAACTCAGAGAAATGTCAAAACGAGCAC
CATGTCCAGTACCTGCTTAAGTACGAGCTGCAAAAATTCAAGGACGATTT
CGAGAAGCACCAAGACAACTGCAAGCCTCGGGCGCTCGTCATTGACGGCC
CCACCCTCATGCTGGCCTCTAAGGAGGGCGTCCGTCGGCGCCTTTTGAAG
CTGACCAGGATATGCAAGTCGGTGGTGGCTTGCCGCGTCTCCCCGGACCA
GAAACGCTCCATCGTCCACCTGGTCAAGAACAACGAGCCGGCCTGTCGGG
CCCTCTCCATTGGAGACGGCGCGAACGACGTACCGATGATACAGGAGGCG
CACGTCGGCGTGGGCAtcgcggggatggaggggatgcagGCGGTCAACGC
CTCCGACTACGCCATCTCCCAgtttcgcttcctccgctccctccttctcg
cgcaCGGCCGGTGGAATTATCGACGCATGGCGTTCATTGTCGCGTACATT
TTTTACAAGAACATCATCCAGTCCATCTCCCAATTCTTTTTCGCTTTTTG
GTGCctGCCATGTGCCCTGCTGTCCATCGAGTAGATGGACAAAATCGAGA
GCAACTTTGAACTGCTGGGAGCGACTGCCATCGAAGACAAACTTCAGGAG
GGCGTCCCGGAGACGATCCACGACCTGACACGCGCAGGCATCAAGGTGTG
GATGCTCACGGGCGACAAAGAGGAAACGGCCGTCAACATCGGTGTGGCTT
GCAACCTTCTCGAACATTCCACGAAGATGCGCCGCATCTCTATCAACTCA
GAGAAATGTCAAAACGAGCACCATGTCCAGTACCTGCTTAAGTACGAGCT
GCAAAAATTCAAGGACGATTTCGAGAAGCACCAAGACAACTGCAAGCCTC
GGGCGCTCGTCATTGACGGCCCCACCCTCATGCTGGCCTCTAAGGAGGGC
GTCCGTCGGCGCCTTTTGAAGCTGACCAGGATATGCAAGTCGGTGGTGGC
TTGCCGCGTCTCCCCGGACCAGAAACGCTCCATCGTCCACCTGGTCAAGA
ACAACGAGCCGGCCTGTCGGGCCCTCTCCATTGGAGACGGCGCGAACGAC
GTACCGATGATACAGGAGGCGCACGTCGGCGTGGGCAtcgcggggatgga
ggggatgcagGCGGTCAACGCCTCCGACTACGCCATCTCCCAgtttcgct
tcctccgctccctccttctcgcgcaCGGCCGGTGGAATTATCGACGCATG
GCGTTCATTGTCGCGTACATTTTTTACAAGAACATCATCCAGTCCATCTC
CCAATTCTTTTTCGCTTTTTGGTGCctGCCATGTGCCCTGCTGTCCATCG
AGTAGATGGACAAAATCGAGAGCAACTTTGAACTGCTGGGAGCGACTGCC
ATCGAAGACAAACTTCAGGAGGGCGTCCCGGAGACGATCCACGACCTGAC
ACGCGCAGGCATCAAGGTGTGGATGCTCACGGGCGACAAAGAGGAAACGG
CCGTCAACATCGGTGTGGCTTGCAACCTTCTCGAACATTCCACGAAGATG
CGCCGCATCTCTATCAACTCAGAGAAATGTCAAAACGAGCACCATGTCCA
GTACCTGCTTAAGTACGAGCTGCAAAAATTCAAGGACGATTTCGAGAAGC
ACCAAGACAACTGCAAGCCTCGGGCGCTCGTCATTGACGGCCCCACCCTC
ATGCTGGCCTCTAAGGAGGGCGTCCGTCGGCGCCTTTTGAAGCTGACCAG
GATATGCAAGTCGGTGGTGGCTTGCCGCGTCTCCCCGGACCAGAAACGCT
CCATCGTCCACCTGGTCAAGAACAACGAGCCGGCCTGTCGGGCCCTCTCC
ATTGGAGACGGCGCGAACGACGTACCGATGATACAGGAGGCGCACGTCGG
CGTGGGCAtcgcggggatggaggggatgcagGCGGTCAACGCCTCCGACT
ACGCCATCTCCCAgtttcgcttcctccgctccctccttctcgcgcaCGGC
CGGTGGAATTATCGACGCATGGCGTTCATTGTCGCGTACATTTTTTACAA
GAACATCATCCAGTCCATCTCCCAATTCTTTTTCGCTTTTTGGTGCctGC
CATGTGCCCTGCTGTCCATCGAGTAGATGGACAAAATCGAGAGCAACTTT
GAACTGCTGGGAGCGACTGCCATCGAAGACAAACTTCAGGAGGGCGTCCC
GGAGACGATCCACGACCTGACACGCGCAGGCATCAAGGTGTGGATGCTCA
CGGGCGACAAAGAGGAAACGGCCGTCAACATCGGTGTGGCTTGCAACCTT
CTCGAACATTCCACGAAGATGCGCCGCATCTCTATCAACTCAGAGAAATG
TCAAAACGAGCACCATGTCCAGTACCTGCTTAAGTACGAGCTGCAAAAAT
TCAAGGACGATTTCGAGAAGCACCAAGACAACTGCAAGCCTCGGGCGCTC
GTCATTGACGGCCCCACCCTCATGCTGGCCTCTAAGGAGGGCGTCCGTCG
GCGCCTTTTGAAGCTGACCAGGATATGCAAGTCGGTGGTGGCTTGCCGCG
TCTCCCCGGACCAGAAACGCTCCATCGTCCACCTGGTCAAGAACAACGAG
CCGGCCTGTCGGGCCCTCTCCATTGGAGACGGCGCGAACGACGTACCGAT
GATACAGGAGGCGCACGTCGGCGTGGGCAtcgcggggatggaggggatgc
agGCGGTCAACGCCTCCGACTACGCCATCTCCCAgtttcgcttcctccgc
tccctccttctcgcgcaCGGCCGGTGGAATTATCGACGCATGGCGTTCAT
TGTCGCGTACATTTTTTACAAGAACATCATCCAGTCCATCTCCCAATTCT
TTTTCGCTTTTTGGTGCctGCCATGTGCCCTGCTGTCCATCGAGTAGATG
GACAAAATCGAGAGCAACTTTGAACTGCTGGGAGCGACTGCCATCGAAGA
CAAACTTCAGGAGGGCGTCCCGGAGACGATCCACGACCTGACACGCGCAG
GCATCAAGGTGTGGATGCTCACGGGCGACAAAGAGGAAACGGCCGTCAAC
ATCGGTGTGGCTTGCAACCTTCTCGAACATTCCACGAAGATGCGCCGCAT
CTCTATCAACTCAGAGAAATGTCAAAACGAGCACCATGTCCAGTACCTGC
TTAAGTACGAGCTGCAAAAATTCAAGGACGATTTCGAGAAGCACCAAGAC
AACTGCAAGCCTCGGGCGCTCGTCATTGACGGCCCCACCCTCATGCTGGC
CTCTAAGGAGGGCGTCCGTCGGCGCCTTTTGAAGCTGACCAGGATATGCA
AGTCGGTGGTGGCTTGCCGCGTCTCCCCGGACCAGAAACGCTCCATCGTC
CACCTGGTCAAGAACAACGAGCCGGCCTGTCGGGCCCTCTCCATTGGAGA
CGGCGCGAACGACGTACCGATGATACAGGAGGCGCACGTCGGCGTGGGCA
tcgcggggatggaggggatgcagGCGGTCAACGCCTCCGACTACGCCATC
TCCCAgtttcgcttcctccgctccctccttctcgcgcaCGGCCGGTGGAA
TTATCGACGCATGGCGTTCATTGTCGCGTACATTTTTTACAAGAACATCA
TCCAGTCCATCTCCCAATTCTTTTTCGCTTTTTGGTGCctGCCATGTGCC
CTGCTGTCCATCGAGTAGATGGACAAAATCGAGAGCAACTTTGAACTGCT
GGGAGCGACTGCCATCGAAGACAAACTTCAGGAGGGCGTCCCGGAGACGA
TCCACGACCTGACACGCGCAGGCATCAAGGTGTGGATGCTCACGGGCGAC
AAAGAGGAAACGGCCGTCAACATCGGTGTGGCTTGCAACCTTCTCGAACA
TTCCACGAAGATGCGCCGCATCTCTATCAACTCAGAGAAATGTCAAAACG
AGCACCATGTCCAGTACCTGCTTAAGTACGAGCTGCAAAAATTCAAGGAC
GATTTCGAGAAGCACCAAGACAACTGCAAGCCTCGGGCGCTCGTCATTGA
CGGCCCCACCCTCATGCTGGCCTCTAAGGAGGGCGTCCGTCGGCGCCTTT
TGAAGCTGACCAGGATATGCAAGTCGGTGGTGGCTTGCCGCGTCTCCCCG
GACCAGAAACGCTCCATCGTCCACCTGGTCAAGAACAACGAGCCGGCCTG
TCGGGCCCTCTCCATTGGAGACGGCGCGAACGACGTACCGATGATACAGG
AGGCGCACGTCGGCGTGGGCAtcgcggggatggaggggatgcagGCGGTC
AACGCCTCCGACTACGCCATCTCCCAgtttcgcttcctccgctccctcct
tctcgcgcaCGGCCGGTGGAATTATCGACGCATGGCGTTCATTGTCGCGT
ACATTTTTTACAAGAACATCATCCAGTCCATCTCCCAATTCTTTTTCGCT
TTTTGGTGCctGCCATGTGCCCTGCTGTCCATCGAGTAG back to top
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