EWM20676.1, cds9997 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20676.1 vs. NCBI_GenBank
Match: gi|585100490|gb|EWM20676.1| (phospholipid-translocating p-type atpase domain containing protein [Nannochloropsis gaditana]) HSP 1 Score: 536.569 bits (1381), Expect = 0.000e+0 Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0
Query: 1 MDKIESNFELLGATAIEDKLQEGVPETIHDLTRAGIKVWMLTGDKEETAVNIGVACNLLEHSTKMRRISINSEKCQNEHHVQYLLKYELQKFKDDFEKHQDNCKPRALVIDGPTLMLASKEGVRRRLLKLTRICKSVVACRVSPDQKRSIVHLVKNNEPACRALSIGDGANDVPMIQEAHVGVGIAGMEGMQAVNASDYAISQFRFLRSLLLAHGRWNYRRMAFIVAYIFYKNIIQSISQFFFAFWCLPCALLSIE 256
MDKIESNFELLGATAIEDKLQEGVPETIHDLTRAGIKVWMLTGDKEETAVNIGVACNLLEHSTKMRRISINSEKCQNEHHVQYLLKYELQKFKDDFEKHQDNCKPRALVIDGPTLMLASKEGVRRRLLKLTRICKSVVACRVSPDQKRSIVHLVKNNEPACRALSIGDGANDVPMIQEAHVGVGIAGMEGMQAVNASDYAISQFRFLRSLLLAHGRWNYRRMAFIVAYIFYKNIIQSISQFFFAFWCLPCALLSIE
Sbjct: 1 MDKIESNFELLGATAIEDKLQEGVPETIHDLTRAGIKVWMLTGDKEETAVNIGVACNLLEHSTKMRRISINSEKCQNEHHVQYLLKYELQKFKDDFEKHQDNCKPRALVIDGPTLMLASKEGVRRRLLKLTRICKSVVACRVSPDQKRSIVHLVKNNEPACRALSIGDGANDVPMIQEAHVGVGIAGMEGMQAVNASDYAISQFRFLRSLLLAHGRWNYRRMAFIVAYIFYKNIIQSISQFFFAFWCLPCALLSIE 256
BLAST of EWM20676.1 vs. NCBI_GenBank
Match: gi|553178621|ref|XP_005852582.1| (aminophospholipid-transporting p-type atpase [Nannochloropsis gaditana CCMP526] >gi|422295951|gb|EKU23250.1| aminophospholipid-transporting p-type atpase [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 257.299 bits (656), Expect = 3.842e-84 Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0
Query: 1 MDKIESNFELLGATAIEDKLQEGVPETIHDLTRAGIKVWMLTGDKEETAVNIGVACNLLEHSTKMRRISINSEKCQNEHHVQYLLKYELQKFKDDFEKHQDNCKPRALVIDGPTLMLASKEGV 123
MDKIESNFELLGATAIEDKLQEGVPETIHDLTRAGIKVWMLTGDKEETAVNIGVACNLLEHSTKMRRISINSEKCQNEHHVQYLLKYELQKFKDDFEKHQDNCKPRALVIDGPTLMLASKEGV
Sbjct: 1 MDKIESNFELLGATAIEDKLQEGVPETIHDLTRAGIKVWMLTGDKEETAVNIGVACNLLEHSTKMRRISINSEKCQNEHHVQYLLKYELQKFKDDFEKHQDNCKPRALVIDGPTLMLASKEGV 123
BLAST of EWM20676.1 vs. NCBI_GenBank
Match: gi|695374876|ref|XP_009515403.1| (hypothetical protein PHYSODRAFT_309039 [Phytophthora sojae] >gi|348688314|gb|EGZ28128.1| hypothetical protein PHYSODRAFT_309039 [Phytophthora sojae]) HSP 1 Score: 275.404 bits (703), Expect = 1.304e-81 Identity = 140/254 (55.12%), Postives = 177/254 (69.69%), Query Frame = 0
Query: 1 MDKIESNFELLGATAIEDKLQEGVPETIHDLTRAGIKVWMLTGDKEETAVNIGVACNLLEHSTKMRRISINSEKCQNEHHVQYLLKYELQKFKDDFEKH-------QDNCKPRALVIDGPTLMLASKEGVRRRLLKLTRICKSVVACRVSPDQKRSIVHLVKNNEPACRALSIGDGANDVPMIQEAHVGVGIAGMEGMQAVNASDYAISQFRFLRSLLLAHGRWNYRRMAFIVAYIFYKNIIQSISQFFFAFWC 247
M +IES+ ELLGATAIEDKLQ GVP+TI +L AGIK+W+LTGDKEETA+NIG AC L+ + M+ INS+ ++ L+ E+ D + + + ALVIDG TLM A + R L + ++ CK+V+ACRVSP QK +V L+K P R L+IGDGANDV MIQEAHVGVGI+G EGMQAVN+SDYAI+QFRFL+ LLL HGRWNYRRMA +V YIFYKNI+ + +Q++F C
Sbjct: 658 MSEIESDLELLGATAIEDKLQSGVPDTIANLACAGIKIWVLTGDKEETAINIGFACQLV--TNDMKLFIINSKNAPTPDILESTLRDEIGARSADVTVYLASPPSTRGELRELALVIDGETLMFALRGPCRPLLAEFSQYCKAVIACRVSPAQKAEMVALIKEYVPGVRTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVNSSDYAIAQFRFLQRLLLVHGRWNYRRMAQLVLYIFYKNILFTAAQYWFTLLC 909
BLAST of EWM20676.1 vs. NCBI_GenBank
Match: gi|970652261|gb|KUF90957.1| (hypothetical protein AM588_10003070 [Phytophthora nicotianae]) HSP 1 Score: 273.478 bits (698), Expect = 2.094e-81 Identity = 137/254 (53.94%), Postives = 177/254 (69.69%), Query Frame = 0
Query: 1 MDKIESNFELLGATAIEDKLQEGVPETIHDLTRAGIKVWMLTGDKEETAVNIGVACNLLEHSTKMRRISINSEKCQNEHHVQYLLKYELQKFKDDFEKH-------QDNCKPRALVIDGPTLMLASKEGVRRRLLKLTRICKSVVACRVSPDQKRSIVHLVKNNEPACRALSIGDGANDVPMIQEAHVGVGIAGMEGMQAVNASDYAISQFRFLRSLLLAHGRWNYRRMAFIVAYIFYKNIIQSISQFFFAFWC 247
M++IE + ELLGATAIEDKLQ GVP+TI +L AGIK+W+LTGDKEETA+NIG AC L+ + M+ INS+ ++ L+ E+ D + + + ALVIDG TLM A + R L + ++ CK+V+ACRVSP QK +V L+K P R L+IGDGANDV MIQEAH+GVGI+G EGMQAVN+SDYAI+QFRFL+ LLL HGRWNYRRMA +V YIFYKNI+ + +Q+++ C
Sbjct: 511 MNEIECDLELLGATAIEDKLQSGVPDTIANLASAGIKIWVLTGDKEETAINIGFACQLV--TNDMKLFIINSKNAPTAEILESTLRDEIGVRSGDVTVYFASPPSTRGELRELALVIDGETLMYALRGSCRPLLAEFSQYCKAVIACRVSPAQKAEMVALIKEYVPGVRTLAIGDGANDVSMIQEAHIGVGISGQEGMQAVNSSDYAIAQFRFLQRLLLVHGRWNYRRMAQLVLYIFYKNILFTAAQYWYTLLC 762
BLAST of EWM20676.1 vs. NCBI_GenBank
Match: gi|953486889|emb|CEG48951.1| (hypothetical protein F443_16459 [Plasmopara halstedii]) HSP 1 Score: 274.248 bits (700), Expect = 3.373e-81 Identity = 136/254 (53.54%), Postives = 180/254 (70.87%), Query Frame = 0
Query: 1 MDKIESNFELLGATAIEDKLQEGVPETIHDLTRAGIKVWMLTGDKEETAVNIGVACNLLEHSTKMRRISINSEKCQNEHHVQYLLKYELQKFKDDFEKH-------QDNCKPRALVIDGPTLMLASKEGVRRRLLKLTRICKSVVACRVSPDQKRSIVHLVKNNEPACRALSIGDGANDVPMIQEAHVGVGIAGMEGMQAVNASDYAISQFRFLRSLLLAHGRWNYRRMAFIVAYIFYKNIIQSISQFFFAFWC 247
M++IE + ELLGATAIEDKLQ GVP+T+ +L RAGIK+W+LTGDKEETA+NIG AC L+ + +M+ IN++ ++ LL+ E+ D + + + ALVIDG TLM A + R L + ++ CK+V+ACRVSP QK +V L+K P R L+IGDGANDV MIQEAH+GVGI+G EGMQAVN+SDYAI+QFR+L+ LLL HGRWNYRRMA +V YIFYKNI+ + +Q+++ C
Sbjct: 658 MNEIECDLELLGATAIEDKLQSGVPDTVGNLARAGIKIWVLTGDKEETAINIGFACQLVVN--EMKLFIINAKNAPTSEGLENLLREEIFIRNADVTAYLASPPSTRGELRELALVIDGETLMFALRGPCRALLAEFSQYCKAVIACRVSPAQKAEMVALIKEFVPGVRTLAIGDGANDVSMIQEAHIGVGISGQEGMQAVNSSDYAIAQFRYLQRLLLVHGRWNYRRMAQLVLYIFYKNILFTAAQYWYTLLC 909
BLAST of EWM20676.1 vs. NCBI_GenBank
Match: gi|970653031|gb|KUF91581.1| (Phospholipid-transporting ATPase IB [Phytophthora nicotianae]) HSP 1 Score: 273.478 bits (698), Expect = 4.961e-81 Identity = 137/254 (53.94%), Postives = 177/254 (69.69%), Query Frame = 0
Query: 1 MDKIESNFELLGATAIEDKLQEGVPETIHDLTRAGIKVWMLTGDKEETAVNIGVACNLLEHSTKMRRISINSEKCQNEHHVQYLLKYELQKFKDDFEKH-------QDNCKPRALVIDGPTLMLASKEGVRRRLLKLTRICKSVVACRVSPDQKRSIVHLVKNNEPACRALSIGDGANDVPMIQEAHVGVGIAGMEGMQAVNASDYAISQFRFLRSLLLAHGRWNYRRMAFIVAYIFYKNIIQSISQFFFAFWC 247
M++IE + ELLGATAIEDKLQ GVP+TI +L AGIK+W+LTGDKEETA+NIG AC L+ + M+ INS+ ++ L+ E+ D + + + ALVIDG TLM A + R L + ++ CK+V+ACRVSP QK +V L+K P R L+IGDGANDV MIQEAH+GVGI+G EGMQAVN+SDYAI+QFRFL+ LLL HGRWNYRRMA +V YIFYKNI+ + +Q+++ C
Sbjct: 602 MNEIECDLELLGATAIEDKLQSGVPDTIANLASAGIKIWVLTGDKEETAINIGFACQLV--TNDMKLFIINSKNAPTAEILESTLRDEIGVRSGDVTVYFASPPSTRGELRELALVIDGETLMYALRGSCRPLLAEFSQYCKAVIACRVSPAQKAEMVALIKEYVPGVRTLAIGDGANDVSMIQEAHIGVGISGQEGMQAVNSSDYAIAQFRFLQRLLLVHGRWNYRRMAQLVLYIFYKNILFTAAQYWYTLLC 853
BLAST of EWM20676.1 vs. NCBI_GenBank
Match: gi|675205469|ref|XP_008911619.1| (hypothetical protein PPTG_16075 [Phytophthora parasitica INRA-310] >gi|568088213|gb|ETN03075.1| hypothetical protein PPTG_16075 [Phytophthora parasitica INRA-310]) HSP 1 Score: 273.092 bits (697), Expect = 8.204e-81 Identity = 137/254 (53.94%), Postives = 177/254 (69.69%), Query Frame = 0
Query: 1 MDKIESNFELLGATAIEDKLQEGVPETIHDLTRAGIKVWMLTGDKEETAVNIGVACNLLEHSTKMRRISINSEKCQNEHHVQYLLKYELQKFKDDFEKH-------QDNCKPRALVIDGPTLMLASKEGVRRRLLKLTRICKSVVACRVSPDQKRSIVHLVKNNEPACRALSIGDGANDVPMIQEAHVGVGIAGMEGMQAVNASDYAISQFRFLRSLLLAHGRWNYRRMAFIVAYIFYKNIIQSISQFFFAFWC 247
M++IE + ELLGATAIEDKLQ GVP+TI +L AGIK+W+LTGDKEETA+NIG AC L+ + M+ INS+ ++ L+ E+ D + + + ALVIDG TLM A + R L + ++ CK+V+ACRVSP QK +V L+K P R L+IGDGANDV MIQEAH+GVGI+G EGMQAVN+SDYAI+QFRFL+ LLL HGRWNYRRMA +V YIFYKNI+ + +Q+++ C
Sbjct: 661 MNEIECDLELLGATAIEDKLQSGVPDTIANLASAGIKIWVLTGDKEETAINIGFACQLV--TNDMKLFIINSKNAPTAEILESTLRDEIGVRSGDVTVYFASPPSTRGELRELALVIDGETLMYALRGSCRPLLAEFSQYCKAVIACRVSPAQKAEMVALIKEYVPGVRTLAIGDGANDVSMIQEAHIGVGISGQEGMQAVNSSDYAIAQFRFLQRLLLVHGRWNYRRMAQLVLYIFYKNILFTAAQYWYTLLC 912
BLAST of EWM20676.1 vs. NCBI_GenBank
Match: gi|566014675|gb|ETI37586.1| (hypothetical protein F443_16459 [Phytophthora parasitica P1569] >gi|567952117|gb|ETK77798.1| hypothetical protein L915_15995 [Phytophthora parasitica] >gi|567980781|gb|ETL31232.1| hypothetical protein L916_15891 [Phytophthora parasitica] >gi|568010300|gb|ETL84489.1| hypothetical protein L917_15689 [Phytophthora parasitica] >gi|570318433|gb|ETO66381.1| hypothetical protein F444_16428 [Phytophthora parasitica P1976] >gi|570942194|gb|ETP07451.1| hypothetical protein F441_16288 [Phytophthora parasitica CJ01A1] >gi|570972739|gb|ETP35526.1| hypothetical protein F442_16301 [Phytophthora parasitica P10297]) HSP 1 Score: 273.092 bits (697), Expect = 9.161e-81 Identity = 137/254 (53.94%), Postives = 177/254 (69.69%), Query Frame = 0
Query: 1 MDKIESNFELLGATAIEDKLQEGVPETIHDLTRAGIKVWMLTGDKEETAVNIGVACNLLEHSTKMRRISINSEKCQNEHHVQYLLKYELQKFKDDFEKH-------QDNCKPRALVIDGPTLMLASKEGVRRRLLKLTRICKSVVACRVSPDQKRSIVHLVKNNEPACRALSIGDGANDVPMIQEAHVGVGIAGMEGMQAVNASDYAISQFRFLRSLLLAHGRWNYRRMAFIVAYIFYKNIIQSISQFFFAFWC 247
M++IE + ELLGATAIEDKLQ GVP+TI +L AGIK+W+LTGDKEETA+NIG AC L+ + M+ INS+ ++ L+ E+ D + + + ALVIDG TLM A + R L + ++ CK+V+ACRVSP QK +V L+K P R L+IGDGANDV MIQEAH+GVGI+G EGMQAVN+SDYAI+QFRFL+ LLL HGRWNYRRMA +V YIFYKNI+ + +Q+++ C
Sbjct: 661 MNEIECDLELLGATAIEDKLQSGVPDTIANLASAGIKIWVLTGDKEETAINIGFACQLV--TNDMKLFIINSKNAPTAEILESTLRDEIGVRSGDVTVYFASPPSTRGELRELALVIDGETLMYALRGSCRPLLAEFSQYCKAVIACRVSPAQKAEMVALIKEYVPGVRTLAIGDGANDVSMIQEAHIGVGISGQEGMQAVNSSDYAIAQFRFLQRLLLVHGRWNYRRMAQLVLYIFYKNILFTAAQYWYTLLC 912
BLAST of EWM20676.1 vs. NCBI_GenBank
Match: gi|568040206|gb|ETM37667.1| (hypothetical protein L914_15823 [Phytophthora parasitica]) HSP 1 Score: 273.092 bits (697), Expect = 1.054e-80 Identity = 137/254 (53.94%), Postives = 177/254 (69.69%), Query Frame = 0
Query: 1 MDKIESNFELLGATAIEDKLQEGVPETIHDLTRAGIKVWMLTGDKEETAVNIGVACNLLEHSTKMRRISINSEKCQNEHHVQYLLKYELQKFKDDFEKH-------QDNCKPRALVIDGPTLMLASKEGVRRRLLKLTRICKSVVACRVSPDQKRSIVHLVKNNEPACRALSIGDGANDVPMIQEAHVGVGIAGMEGMQAVNASDYAISQFRFLRSLLLAHGRWNYRRMAFIVAYIFYKNIIQSISQFFFAFWC 247
M++IE + ELLGATAIEDKLQ GVP+TI +L AGIK+W+LTGDKEETA+NIG AC L+ + M+ INS+ ++ L+ E+ D + + + ALVIDG TLM A + R L + ++ CK+V+ACRVSP QK +V L+K P R L+IGDGANDV MIQEAH+GVGI+G EGMQAVN+SDYAI+QFRFL+ LLL HGRWNYRRMA +V YIFYKNI+ + +Q+++ C
Sbjct: 661 MNEIECDLELLGATAIEDKLQSGVPDTIANLASAGIKIWVLTGDKEETAINIGFACQLV--TNDMKLFIINSKNAPTAEILESTLRDEIGVRSGDVTVYFASPPSTRGELRELALVIDGETLMYALRGSCRPLLAEFSQYCKAVIACRVSPAQKAEMVALIKEYVPGVRTLAIGDGANDVSMIQEAHIGVGISGQEGMQAVNSSDYAIAQFRFLQRLLLVHGRWNYRRMAQLVLYIFYKNILFTAAQYWYTLLC 912
BLAST of EWM20676.1 vs. NCBI_GenBank
Match: gi|1214712629|gb|OWZ23560.1| (Phospholipid-transporting ATPase [Phytophthora megakarya]) HSP 1 Score: 270.781 bits (691), Expect = 1.881e-80 Identity = 136/254 (53.54%), Postives = 175/254 (68.90%), Query Frame = 0
Query: 1 MDKIESNFELLGATAIEDKLQEGVPETIHDLTRAGIKVWMLTGDKEETAVNIGVACNLLEHSTKMRRISINSEKCQNEHHVQYLLKYELQKFKDDFEKH-------QDNCKPRALVIDGPTLMLASKEGVRRRLLKLTRICKSVVACRVSPDQKRSIVHLVKNNEPACRALSIGDGANDVPMIQEAHVGVGIAGMEGMQAVNASDYAISQFRFLRSLLLAHGRWNYRRMAFIVAYIFYKNIIQSISQFFFAFWC 247
M++IE + ELLGATAIEDKLQ GVP+ I +L AGIK+W+LTGDKEETA+NIG AC L+ + M+ IN + ++ L+ E+ D + + + ALVIDG TLM A + R L + ++ CK+V+ACRVSP QK +V L+K P R L+IGDGANDV MIQEAHVGVGI+G EGMQAVN+SDYAI+QFRFL+ LLL HGRWNYRRMA +V YIFYKNI+ + +Q+++ C
Sbjct: 511 MNEIEQDLELLGATAIEDKLQSGVPDAIANLASAGIKIWVLTGDKEETAINIGFACQLV--TNDMKLFIINGKNAPTSEVLESTLRDEIGARSVDVTVYLASPPNTRGELREIALVIDGETLMYALRGSCRPLLAEFSQYCKAVIACRVSPAQKAEMVALIKEYVPGVRTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVNSSDYAIAQFRFLQRLLLVHGRWNYRRMAQLVLYIFYKNILFTAAQYWYTLLC 762 The following BLAST results are available for this feature:
BLAST of EWM20676.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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