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Properties
| Property Name | Value |
|---|
| Product | brca1-associated protein 2 containing protein |
| Orig transcript id | gnl|cribi|Naga_100433g6.4472.mrna |
| Orig protein id | gnl|cribi|Naga_100433g6.4472 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| KK037260.1 | supercontig | KK037260.1:9052..11472 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna10018 ID=rna10018|Name=rna10018|organism=Nannochloropsis gaditana|type=mRNA|length=489bp
ATGCGTCTCCCTTTCGTCTCTGCATGCCTCGTCGTACTTGGCATTGTCCA
TGCCCCCATCGCAGTCGCGCAGGAGTGTCCCACTCTCACACTCACTGGCA
AGGCACGTCCGAGCCCCAAGCGCGGAATCTTGGCGGGTAAAGGTCATGCC
AGGGTCACAGTCACTCTCCGAAGTAAGGAAGTCGTGGATGATCTCAACTT
CAAACTGCTGCTACCAGCCGGTGTGTCACTTGTGCGTTCGTCCAGTCGTC
CGAAGCCGCGCATCTACCCTGAAGTCGTCGAGAACCCGGACGGATCAACA
GCCGTGTTTTGGCTCGGCTTTGACTTTGTGAAAGCCAAGGGCGGCAAGCG
TGTTTTCAAAGCCAAACTGAAAGTCGACGAGTGTGCCCCAGAGACCCTGA
CAGTCACCGGTCTAGCGTATCTGGTCAATACGACGGACCTCACAACCTAC
TGCGCGACGCCGTTGGCAACCCTTTGTGTTGTTTGGTGA back to topprotein sequence of rna10018 >rna10018-protein ID=rna10018-protein|Name=rna10018|organism=Nannochloropsis gaditana|type=polypeptide|length=669bp
MITSELLQFVSPFRDDIRLLRIVSHRLPAPPPSLHPSIFAAPAHASPSMR
DPPLAAGDPSSMHSPLPPPYPTPSQPAKYMALLEMTTSTAADAFFHEFNG
RPFNSLEPTLCAVGFLKGLLFRRPSAPLARTEWGGNGADNAASEEKGPKE
TQSPSPLGGPALEEGEGTKRAGLEEDKKEEEEEERMDCGRKAGSGTEGPG
DHCQVTGQDSSAGVRGLGADDGIFHSRSGVRDDGQDVIPRAKEYQKLCDT
DSPSLHPPSLPPSFLSPSLHQAVHDPSDPEISTTRDHHDGTCTATSHADG
EGGSSLSSLGANEENLSHCVVCLETLAGLPPSPSAPPSLPPLSPPILITA
CNHAFHIPCLGQVPSPLCPVCRYNHDDALAHHSSACTDCGRTTDLWVCLV
CAYVGCGRYHAHHSRNHYLATLHAYAIEVQTQQVWDYVGDGYVHRLLYHP
YSAGGEGGGEGGKIVEVPDPNTNSNQRPRHAPLPEAMEEEMVHRKLENWA
EQYTVLLSTGLQEQQTRFEARLAALRTAFSPSHRSSSSGATVVAALRQEK
RQMEKRCAGARERLRKVREEVGFLSAVNASLEANQESVAASLREAQEELM
KTEKERETMVGPLEERLRQLMTRLDCQIGDGSESKALGDHGVQEAKERGC
GEAGGDSGDRRQGTDRKEG back to topmRNA from alignment at KK037260.1:9052..11472- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna10018 ID=rna10018|Name=rna10018|organism=Nannochloropsis gaditana|type=mRNA|length=2421bp|location=Sequence derived from alignment at KK037260.1:9052..11472- (Nannochloropsis gaditana)
CTTAGTTTGCCTCCGGGTCGCGGCTTGCACTTGGTCATTTTCTTCGTGCC
AGCCCACATGATTACCAGCGAGCTCCTTCAGTTCGTCTCCCCCTTCCGCG
ACGACATCCGCCTCCTACGCATCGTCAGTCACCGCCTGCCTGCACCCCCG
CCGTCTCTGCATCCCTCCATTTTCGCCGCGCCCGCCCATGCCTCCCCATC
GATGCGAGACCCCCCGCTGGCCGCGGGAGACCCTTCTTCCATGCATTCCC
CCTTGCCTCCTCCGTACCCTACACCATCGCAACCGGCCAAATACATGGCT
TTGCTGGAAATGACAACGTCGACGGCTGCGGATGCGTTCTTTCATGAATT
TAACGGGCGTCCATTTAACAGCTTGGAGCCGACGCTCTGTGCCGTCGGTT
TTTTGAAAGGATTACTGTTCAGACGACCCTCCGCTCCTCTTGCCCGCACT
GGTACGTGACCCTCGTTCATTGATGTGTTCACGATGCAGGACTTGCTCGC
GGTTTTTATGTGTTTCCCTCCTTTTCTCCTTTCCCCCATACCGGTTACCC
GCCCCCTTGTTGCTGCCCCGCTTCTCTCTGGCTCCGCCTCCCTGCCTCGC
TCACGCTGTGTTACCACGATCCTTGTCGCAGAATGGGGGGGAAATGGGGC
AGATAATGCCGCGTCCGAGGAAAAAGGGCCCAAGGAGACCCAAAGTCCAT
CTCCACTTGGAGGACCTGCTCTAGAGGAAGGCGAGGGGACGAAGAGAGCA
GGGCTTGAAGAGGACAAGAAGGAGGAAGAGGAGGAGGAACGCATGGACTG
CGGACGAAAAGCGGGATCAGGCACAGAGGGGCCAGGGGATCATTGTCAGG
TCACTGGCCAGGACTCGTCGGCAGGAGTTCGGGGTCTCGGCGCGGATGAT
GGTATCTTCCACAGCCGCAGTGGCGTTCGAGACGACGGCCAAGACGTTAT
CCCTCGCGCAAAGGAATATCAAAAACTGTGTGACACCGATTCTCCTTCCC
TCCACCCTCCCTCCCTCCCTCCCTCCTTCCTGAGCCCCAGCCTCCATCAA
GCCGTCCACGATCCAAGTGACCCTGAAATATCAACGACCAGGGATCATCA
CGACGGCACATGCACCGCAACCAGCCACGCAGATGGAGAAGGCGGCAGTT
CCTTGTCCTCTCTCGGTGCCAATGAAGAGAACCTCTCGCATTGCGTCGTC
TGCCTCGAAACCCTCGCCGGCCTTCCCCCCTCCCCCTCCGCCCCTCCCTC
GCTCCCGCCCCTCTCTCCTCCTATCCTCATCACGGCTTGCAATCACGCCT
TCCATATCCCTTGTTTGGGACAGGTCCCTTCCCCACTCTGCCCCGTTTGC
CGTTACAACCACGATGACGCCCTTGCCCACCATTCCTCCGCCTGCACGGA
CTGCGGGCGGACCACCGACCTGTGGGTCTGCCTGGTTTGTGCCTACGTAG
GGTGCGGCCGGTATCATGCCCACCATTCTCGAAACCATTACCTGGCCACC
CTCCACGCCTATGCCATCGAGGTTCAGACCCAGCAAGTCTGGGATTACGT
GGGGGATGGCTACGTTCACAGGTTACTCTACCATCCGTACTCCGCAGGAG
GAGAAGGCGGTGGGGAGGGAGGGAAAATCGTCGAGGTCCCCGATCCTAAC
ACCAATTCCAATCAACGGCCGCGGCATGCGCCCTTGCCGGAGGCGATGGA
AGAGGAAATGGTGCACCGGAAGCTGGAAAACTGGGCCGAGCAATACACGG
TGCTCCTCTCGACGGGGCTACAAGAGCAACAAACGCGCTTTGAGGCACGC
TTGGCTGCGCTACGGACAGCATTTTCGCCTTCTCATCGTTCTTCCTCGTC
GGGCGCTACGGTGGTGGCAGCCTTGCGGCAAGAAAAACGGCAAATGGAGA
AACGTTGCGCAGGGGCTCGGGAACGCTTGCGGAAAGTGAGGGAGGAGGTG
GGTTTCTTGAGCGCTGTGAACGCGTCCCTGGAGGCAAATCAAGAATCGGT
AGCAGCCTCCTTGCGGGAGGCACAAGAGGAGCTGATGAAGACAGAGAAGG
AAAGAGAGACGATGGTGGGCCCATTGGAAGAGAGATTACGGCAATTGATG
ACGCGCTTGGATTGTCAAATCGGGGATGGATCGGAATCGAAAGCGCTAGG
AGACCATGGAGTGCAGGAAGCCAAAGAGAGAGGTTGTGGGGAAGCTGGGG
GTGATAGTGGAGATAGACGTCAGGGGACAGACCGCAAAGAGGGTTGATTG
GATCAACAGGTCAACAACGACTCTATTGAAATCGGCTGGAGGATTGTGGT
TTCAATTATTTTCACGCAATCGCACTTGCAATCGCGATTCAAATTAAAGT
ACCTTCAAAGTTTCGCGTACTCTTACAGGTTTCAAATACGGTTTTGGTTG
CTTGATGTGTGACATAAACTG back to topCoding sequence (CDS) from alignment at KK037260.1:9052..11472- >rna10018 ID=rna10018|Name=rna10018|organism=Nannochloropsis gaditana|type=CDS|length=4020bp|location=Sequence derived from alignment at KK037260.1:9052..11472- (Nannochloropsis gaditana)
AATGGGGGGGAAATGGGGCAGATAATGCCGCGTCCGAGGAAAAAGGGCCC
AAGGAGACCCAAAGTCCATCTCCACTTGGAGGACCTGCTCTAGAGGAAGG
CGAGGGGACGAAGAGAGCAGGGCTTGAAGAGGACAAGAAGGAGGAAGAGG
AGGAGGAACGCATGGACTGCGGACGAAAAGCGGGATCAGGCACAGAGGGG
CCAGGGGATCATTGTCAGGTCACTGGCCAGGACTCGTCGGCAGGAGTTCG
GGGTCTCGGCGCGGATGATGGTATCTTCCACAGCCGCAGTGGCGTTCGAG
ACGACGGCCAAGACGTTATCCCTCGCGCAAAGGAATATCAAAAACTGTGT
GACACCGATTCTCCTTCCCTCCACCCTCCCTCCCTCCCTCCCTCCTTCCT
GAGCCCCAGCCTCCATCAAGCCGTCCACGATCCAAGTGACCCTGAAATAT
CAACGACCAGGGATCATCACGACGGCACATGCACCGCAACCAGCCACGCA
GATGGAGAAGGCGGCAGTTCCTTGTCCTCTCTCGGTGCCAATGAAGAGAA
CCTCTCGCATTGCGTCGTCTGCCTCGAAACCCTCGCCGGCCTTCCCCCCT
CCCCCTCCGCCCCTCCCTCGCTCCCGCCCCTCTCTCCTCCTATCCTCATC
ACGGCTTGCAATCACGCCTTCCATATCCCTTGTTTGGGACAGGTCCCTTC
CCCACTCTGCCCCGTTTGCCGTTACAACCACGATGACGCCCTTGCCCACC
ATTCCTCCGCCTGCACGGACTGCGGGCGGACCACCGACCTGTGGGTCTGC
CTGGTTTGTGCCTACGTAGGGTGCGGCCGGTATCATGCCCACCATTCTCG
AAACCATTACCTGGCCACCCTCCACGCCTATGCCATCGAGGTTCAGACCC
AGCAAGTCTGGGATTACGTGGGGGATGGCTACGTTCACAGGTTACTCTAC
CATCCGTACTCCGCAGGAGGAGAAGGCGGTGGGGAGGGAGGGAAAATCGT
CGAGGTCCCCGATCCTAACACCAATTCCAATCAACGGCCGCGGCATGCGC
CCTTGCCGGAGGCGATGGAAGAGGAAATGGTGCACCGGAAGCTGGAAAAC
TGGGCCGAGCAATACACGGTGCTCCTCTCGACGGGGCTACAAGAGCAACA
AACGCGCTTTGAGGCACGCTTGGCTGCGCTACGGACAGCATTTTCGCCTT
CTCATCGTTCTTCCTCGTCGGGCGCTACGGTGGTGGCAGCCTTGCGGCAA
GAAAAACGGCAAATGGAGAAACGTTGCGCAGGGGCTCGGGAACGCTTGCG
GAAAGTGAGGGAGGAGGTGGGTTTCTTGAGCGCTGTGAACGCGTCCCTGG
AGGCAAATCAAGAATCGGTAGCAGCCTCCTTGCGGGAGGCACAAGAGGAG
CTGATGAAGACAGAGAAGGAAAGAGAGACGATGGTGGGCCCATTGGAAGA
GAGATTACGGCAATTGATGACGCGCTTGGATTGTCAAATCGGGGATGGAT
CGGAATCGAAAGCGCTAGGAGACCATGGAGTGCAGGAAGCCAAAGAGAGA
GGTTGTGGGGAAGCTGGGGGTGATAGTGGAGATAGACGTCAGGGGACAGA
CCGCAAAGAGGGTTGAATGATTACCAGCGAGCTCCTTCAGTTCGTCTCCC
CCTTCCGCGACGACATCCGCCTCCTACGCATCGTCAGTCACCGCCTGCCT
GCACCCCCGCCGTCTCTGCATCCCTCCATTTTCGCCGCGCCCGCCCATGC
CTCCCCATCGATGCGAGACCCCCCGCTGGCCGCGGGAGACCCTTCTTCCA
TGCATTCCCCCTTGCCTCCTCCGTACCCTACACCATCGCAACCGGCCAAA
TACATGGCTTTGCTGGAAATGACAACGTCGACGGCTGCGGATGCGTTCTT
TCATGAATTTAACGGGCGTCCATTTAACAGCTTGGAGCCGACGCTCTGTG
CCGTCGGTTTTTTGAAAGGATTACTGTTCAGACGACCCTCCGCTCCTCTT
GCCCGCACTGAATGGGGGGGAAATGGGGCAGATAATGCCGCGTCCGAGGA
AAAAGGGCCCAAGGAGACCCAAAGTCCATCTCCACTTGGAGGACCTGCTC
TAGAGGAAGGCGAGGGGACGAAGAGAGCAGGGCTTGAAGAGGACAAGAAG
GAGGAAGAGGAGGAGGAACGCATGGACTGCGGACGAAAAGCGGGATCAGG
CACAGAGGGGCCAGGGGATCATTGTCAGGTCACTGGCCAGGACTCGTCGG
CAGGAGTTCGGGGTCTCGGCGCGGATGATGGTATCTTCCACAGCCGCAGT
GGCGTTCGAGACGACGGCCAAGACGTTATCCCTCGCGCAAAGGAATATCA
AAAACTGTGTGACACCGATTCTCCTTCCCTCCACCCTCCCTCCCTCCCTC
CCTCCTTCCTGAGCCCCAGCCTCCATCAAGCCGTCCACGATCCAAGTGAC
CCTGAAATATCAACGACCAGGGATCATCACGACGGCACATGCACCGCAAC
CAGCCACGCAGATGGAGAAGGCGGCAGTTCCTTGTCCTCTCTCGGTGCCA
ATGAAGAGAACCTCTCGCATTGCGTCGTCTGCCTCGAAACCCTCGCCGGC
CTTCCCCCCTCCCCCTCCGCCCCTCCCTCGCTCCCGCCCCTCTCTCCTCC
TATCCTCATCACGGCTTGCAATCACGCCTTCCATATCCCTTGTTTGGGAC
AGGTCCCTTCCCCACTCTGCCCCGTTTGCCGTTACAACCACGATGACGCC
CTTGCCCACCATTCCTCCGCCTGCACGGACTGCGGGCGGACCACCGACCT
GTGGGTCTGCCTGGTTTGTGCCTACGTAGGGTGCGGCCGGTATCATGCCC
ACCATTCTCGAAACCATTACCTGGCCACCCTCCACGCCTATGCCATCGAG
GTTCAGACCCAGCAAGTCTGGGATTACGTGGGGGATGGCTACGTTCACAG
GTTACTCTACCATCCGTACTCCGCAGGAGGAGAAGGCGGTGGGGAGGGAG
GGAAAATCGTCGAGGTCCCCGATCCTAACACCAATTCCAATCAACGGCCG
CGGCATGCGCCCTTGCCGGAGGCGATGGAAGAGGAAATGGTGCACCGGAA
GCTGGAAAACTGGGCCGAGCAATACACGGTGCTCCTCTCGACGGGGCTAC
AAGAGCAACAAACGCGCTTTGAGGCACGCTTGGCTGCGCTACGGACAGCA
TTTTCGCCTTCTCATCGTTCTTCCTCGTCGGGCGCTACGGTGGTGGCAGC
CTTGCGGCAAGAAAAACGGCAAATGGAGAAACGTTGCGCAGGGGCTCGGG
AACGCTTGCGGAAAGTGAGGGAGGAGGTGGGTTTCTTGAGCGCTGTGAAC
GCGTCCCTGGAGGCAAATCAAGAATCGGTAGCAGCCTCCTTGCGGGAGGC
ACAAGAGGAGCTGATGAAGACAGAGAAGGAAAGAGAGACGATGGTGGGCC
CATTGGAAGAGAGATTACGGCAATTGATGACGCGCTTGGATTGTCAAATC
GGGGATGGATCGGAATCGAAAGCGCTAGGAGACCATGGAGTGCAGGAAGC
CAAAGAGAGAGGTTGTGGGGAAGCTGGGGGTGATAGTGGAGATAGACGTC
AGGGGACAGACCGCAAAGAGGGTTGAATGATTACCAGCGAGCTCCTTCAG
TTCGTCTCCCCCTTCCGCGACGACATCCGCCTCCTACGCATCGTCAGTCA
CCGCCTGCCTGCACCCCCGCCGTCTCTGCATCCCTCCATTTTCGCCGCGC
CCGCCCATGCCTCCCCATCGATGCGAGACCCCCCGCTGGCCGCGGGAGAC
CCTTCTTCCATGCATTCCCCCTTGCCTCCTCCGTACCCTACACCATCGCA
ACCGGCCAAATACATGGCTTTGCTGGAAATGACAACGTCGACGGCTGCGG
ATGCGTTCTTTCATGAATTTAACGGGCGTCCATTTAACAGCTTGGAGCCG
ACGCTCTGTGCCGTCGGTTTTTTGAAAGGATTACTGTTCAGACGACCCTC
CGCTCCTCTTGCCCGCACTG back to top
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