EWM20686.1, cds9987 (CDS) Nannochloropsis gaditana

Overview
NameEWM20686.1
Unique Namecds9987
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037260.1:11022..11415 -
Alignment locationKK037260.1:9226..10841 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20686.1
Productbrca1-associated protein 2 containing protein
Orig transcript idgnl|cribi|Naga_100433g6.4472.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037260.1supercontigKK037260.1:11022..11415 -
KK037260.1supercontigKK037260.1:9226..10841 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR011422BRAP2
IPR001607Znf_UBP
IPR001841Znf_RING
Homology
BLAST of EWM20686.1 vs. NCBI_GenBank
Match: gi|585100508|gb|EWM20686.1| (brca1-associated protein 2 containing protein [Nannochloropsis gaditana])

HSP 1 Score: 1369.76 bits (3544), Expect = 0.000e+0
Identity = 669/669 (100.00%), Postives = 669/669 (100.00%), Query Frame = 0
Query:    1 MITSELLQFVSPFRDDIRLLRIVSHRLPAPPPSLHPSIFAAPAHASPSMRDPPLAAGDPSSMHSPLPPPYPTPSQPAKYMALLEMTTSTAADAFFHEFNGRPFNSLEPTLCAVGFLKGLLFRRPSAPLARTEWGGNGADNAASEEKGPKETQSPSPLGGPALEEGEGTKRAGLEEDKKEEEEEERMDCGRKAGSGTEGPGDHCQVTGQDSSAGVRGLGADDGIFHSRSGVRDDGQDVIPRAKEYQKLCDTDSPSLHPPSLPPSFLSPSLHQAVHDPSDPEISTTRDHHDGTCTATSHADGEGGSSLSSLGANEENLSHCVVCLETLAGLPPSPSAPPSLPPLSPPILITACNHAFHIPCLGQVPSPLCPVCRYNHDDALAHHSSACTDCGRTTDLWVCLVCAYVGCGRYHAHHSRNHYLATLHAYAIEVQTQQVWDYVGDGYVHRLLYHPYSAGGEGGGEGGKIVEVPDPNTNSNQRPRHAPLPEAMEEEMVHRKLENWAEQYTVLLSTGLQEQQTRFEARLAALRTAFSPSHRSSSSGATVVAALRQEKRQMEKRCAGARERLRKVREEVGFLSAVNASLEANQESVAASLREAQEELMKTEKERETMVGPLEERLRQLMTRLDCQIGDGSESKALGDHGVQEAKERGCGEAGGDSGDRRQGTDRKEG 669
            MITSELLQFVSPFRDDIRLLRIVSHRLPAPPPSLHPSIFAAPAHASPSMRDPPLAAGDPSSMHSPLPPPYPTPSQPAKYMALLEMTTSTAADAFFHEFNGRPFNSLEPTLCAVGFLKGLLFRRPSAPLARTEWGGNGADNAASEEKGPKETQSPSPLGGPALEEGEGTKRAGLEEDKKEEEEEERMDCGRKAGSGTEGPGDHCQVTGQDSSAGVRGLGADDGIFHSRSGVRDDGQDVIPRAKEYQKLCDTDSPSLHPPSLPPSFLSPSLHQAVHDPSDPEISTTRDHHDGTCTATSHADGEGGSSLSSLGANEENLSHCVVCLETLAGLPPSPSAPPSLPPLSPPILITACNHAFHIPCLGQVPSPLCPVCRYNHDDALAHHSSACTDCGRTTDLWVCLVCAYVGCGRYHAHHSRNHYLATLHAYAIEVQTQQVWDYVGDGYVHRLLYHPYSAGGEGGGEGGKIVEVPDPNTNSNQRPRHAPLPEAMEEEMVHRKLENWAEQYTVLLSTGLQEQQTRFEARLAALRTAFSPSHRSSSSGATVVAALRQEKRQMEKRCAGARERLRKVREEVGFLSAVNASLEANQESVAASLREAQEELMKTEKERETMVGPLEERLRQLMTRLDCQIGDGSESKALGDHGVQEAKERGCGEAGGDSGDRRQGTDRKEG
Sbjct:    1 MITSELLQFVSPFRDDIRLLRIVSHRLPAPPPSLHPSIFAAPAHASPSMRDPPLAAGDPSSMHSPLPPPYPTPSQPAKYMALLEMTTSTAADAFFHEFNGRPFNSLEPTLCAVGFLKGLLFRRPSAPLARTEWGGNGADNAASEEKGPKETQSPSPLGGPALEEGEGTKRAGLEEDKKEEEEEERMDCGRKAGSGTEGPGDHCQVTGQDSSAGVRGLGADDGIFHSRSGVRDDGQDVIPRAKEYQKLCDTDSPSLHPPSLPPSFLSPSLHQAVHDPSDPEISTTRDHHDGTCTATSHADGEGGSSLSSLGANEENLSHCVVCLETLAGLPPSPSAPPSLPPLSPPILITACNHAFHIPCLGQVPSPLCPVCRYNHDDALAHHSSACTDCGRTTDLWVCLVCAYVGCGRYHAHHSRNHYLATLHAYAIEVQTQQVWDYVGDGYVHRLLYHPYSAGGEGGGEGGKIVEVPDPNTNSNQRPRHAPLPEAMEEEMVHRKLENWAEQYTVLLSTGLQEQQTRFEARLAALRTAFSPSHRSSSSGATVVAALRQEKRQMEKRCAGARERLRKVREEVGFLSAVNASLEANQESVAASLREAQEELMKTEKERETMVGPLEERLRQLMTRLDCQIGDGSESKALGDHGVQEAKERGCGEAGGDSGDRRQGTDRKEG 669          
BLAST of EWM20686.1 vs. NCBI_GenBank
Match: gi|298708260|emb|CBJ48323.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 249.595 bits (636), Expect = 1.110e-70
Identity = 134/318 (42.14%), Postives = 186/318 (58.49%), Query Frame = 0
Query:  313 EENLSHCVVCLETLAGLPPSPSAPPSLPPLSPPILITACNHAFHIPCLGQVPSPLCPVCRYNHDDALAHHSSACTDCGRTTDLWVCLVCAYVGCGRYHAHHSRNHYLATLHAYAIEVQTQQVWDYVGDGYVHRLLYHPYSAGGEGGGEGGKIVEVPDPNTNSNQRPRH-APLPEAMEEEMVHRKLENWAEQYTVLLSTGLQEQQTRFEARLAALRTAFSPSHRSSS----SGATVVAALRQEKRQMEKRCAGARERLRKVREEVGFLSAVNASLEANQESVAASLREAQEELMKTEKERETMVGPLEERLRQLMTRLD 625
            E + S CV+C+E +                   +L T CNH+FH+ CL +     CPVCR++H++A    +S C +C    +LWVCL+C  V CG  H  H R HY +TLHAYAIE++TQQVWD+ GDG+VHRL++             GK+VE+ DP   S +RP+  A L +  EE +VH KLE  A QY  LL++ L EQ+  ++ +L  L      S R       SGA +V+ALRQ++R++E +CA A  RLRK+REE  FL  +N SLEAN+  V A+L +A+ +L    K RE  V  LEE++  LM +LD
Sbjct:  281 EYDASTCVICMERMES----------------RVLTTVCNHSFHVECLMKWQDSPCPVCRFHHNNA--SEASTCQECQAADNLWVCLICGSVLCGSRHEDHIRGHYNSTLHAYAIEIETQQVWDFAGDGFVHRLIH---------NKADGKLVEISDPEQTSEERPQMPARLSDVQEERLVHGKLEGLAYQYNTLLTSQLDEQRHFYQKQLNGLLEQQEKSRRERRERMVSGADLVSALRQQRRELESKCASASARLRKIREETAFLWELNQSLEANKPQVLANLEQARRDLDSARKAREEWVPQLEEKVAALMLKLD 571          
BLAST of EWM20686.1 vs. NCBI_GenBank
Match: gi|1210520836|dbj|GAX20399.1| (BRCA1-associated protein [Fistulifera solaris])

HSP 1 Score: 218.394 bits (555), Expect = 2.606e-60
Identity = 132/359 (36.77%), Postives = 190/359 (52.92%), Query Frame = 0
Query:  298 ADGEGGSSLSS--LGANEENLSHCVVCLETLAGLPPSPSAPPSLPPLSPPILITACNHAFHIPCLGQVPSPLCPVCRYNHDDALAHHSSACTDCGRTTDLWVCLVCAYVGCGRYHAH--------------------HSRNHYLATLHAYAIEVQTQQVWDYVGDGYVHRLLYHPYSAGGEGGGEGGKIVEVPDPN-TNSNQRPRH-APLPEAMEEEMVHRKLENWAEQYTVLLSTGLQEQQTRFEARLAALRTAFSPSHRSSSSGATVVAALRQEKRQMEKRCAGARERLRKVREEVGFLSAVNASLEANQESVAASLREAQEELMKTEKERETMVGPLEERLRQLMTRLDCQIGDGS 632
              G  G SL S        +  HC VCLE +                +  I  T CNH+FHI CL Q     CPVCRY+H   L    S C  CG T   +VCL+C  V CG   ++                    H++ HY  TLHAYA++  TQ VWD+ G GYVHRLL            E GK+VE+ DPN T+S +R  H   L +A E EMVHRKLE +A QY  LL + L++Q+  ++ RL  LR  F P  ++      V+ AL+QE++Q+ +R    + R +KV + V FL  +N SLEANQ+++   +++A+ E M+  ++ E+++ PL+E++ +LM +L+ + G  S
Sbjct:  119 VQGHEGVSLVSPFFAPGRSDDYHCAVCLEHMDE--------------TTDIFTTVCNHSFHIDCLIQWQDSPCPVCRYDHA-GLKEALSQCHQCGTTDHNYVCLICGIVACGGIPSNDTSASACHLPTQEPTPRATSHAQQHYDETLHAYALDTITQHVWDFAGQGYVHRLL---------QNKEDGKLVEISDPNNTSSQERSSHPTALSDAQEGEMVHRKLEGYASQYYTLLKSQLEQQRIFYQGRLEELRHEFRPPPQAHD----VILALKQERQQLAQRLQSVQARYQKVHDTVQFLRNMNESLEANQKALQHEMQQARREQMEVRQKLESVLPPLQEQVTRLMLQLERECGSAS 449          
BLAST of EWM20686.1 vs. NCBI_GenBank
Match: gi|1210514060|dbj|GAX26842.1| (BRCA1-associated protein [Fistulifera solaris])

HSP 1 Score: 213.001 bits (541), Expect = 8.117e-59
Identity = 126/348 (36.21%), Postives = 185/348 (53.16%), Query Frame = 0
Query:  298 ADGEGGSSLSS--LGANEENLSHCVVCLETLAGLPPSPSAPPSLPPLSPPILITACNHAFHIPCLGQVPSPLCPVCRYNHDDALAHHSSACTDCGRTTDLWVCLVCAYVGCGRYHA----------------HHSRNHYLATLHAYAIEVQTQQVWDYVGDGYVHRLLYHPYSAGGEGGGEGGKIVEVPDPN-TNSNQRPRH-APLPEAMEEEMVHRKLENWAEQYTVLLSTGLQEQQTRFEARLAALRTAFSPSHRSSSSGATVVAALRQEKRQMEKRCAGARERLRKVREEVGFLSAVNASLEANQESVAASLREAQEELMKTEKERETMVGPLEERLRQLMTRLD 625
              G  G SL S        +  HC VCLE +                +  I  T CNH+FHI CL Q     CPVCRY+H   L    S C  CG T   +VCL+C  V CG   +                 H++ HY  TLHAYA++  TQ VWD+ G GYVHRLL            E GK+VE+ DPN  +S +R  H   + +A E EMVHRKLE +A QY  LL + L++Q+  ++ RL  LR  F P  ++      V+ AL+QE++Q+ +R    + R +KV + + FL  +N SLEANQ+++   +++A+ E ++  ++ E+++ PL+E++ +LM +L+
Sbjct:   84 VQGHEGVSLVSPFFAPGRSDDYHCAVCLEHMDE--------------TTDIFTTVCNHSFHIDCLIQWQDSPCPVCRYDHA-GLKEALSQCHQCGTTDHNYVCLICGIVACGGVASTSTAGCPTQEPTPRTTSHAQQHYDQTLHAYALDTITQHVWDFAGQGYVHRLL---------QNKEDGKLVEISDPNNISSRERSIHPTAMSDAQEGEMVHRKLEGYASQYYTLLKSQLEQQRIFYQGRLEELRHEFRPQPQAHD----VILALKQERQQLAQRLQSVQARYQKVHDNIQFLRNMNESLEANQKALEQEMKQARREQIEVRQKLESVLPPLQEQVTRLMLQLE 403          
BLAST of EWM20686.1 vs. NCBI_GenBank
Match: gi|301116936|ref|XP_002906196.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262107545|gb|EEY65597.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 211.46 bits (537), Expect = 5.007e-57
Identity = 115/304 (37.83%), Postives = 165/304 (54.28%), Query Frame = 0
Query:  327 AGLPPSPSAPPSLPPLSPP---ILITACNHAFHIPCLGQVPSPLCPVCRYNHDDALAHHSSACTDCGRTTDLWVCLVCAYVGCGRYHAHHSRNHYLATLHAYAIEVQTQQVWDYVGDGYVHRLLYHPYSAGGEGGGEGGKIVEVPDPNTNSNQRPRHAPLPEAMEEEMVHRKLENWAEQYTVLLSTGLQEQQTRFEARLAALRTAFSPSHRSSSSGATVVAALRQEKRQMEKRCAGARERLRKVREEVGFLSAVNASLEANQESVAASLREAQEELMKTEKERETMVGPLEERLRQLMTRLDCQ 627
            AG+   P+    L  L      IL T CNH+FH  CL +     CPVCRY+H D      S+C  CG    LW+CL+C +VGCGRY   H++ HY  TLH Y++E++TQ+VWDY GDGYVHRL+ +          + GK VE P PN  S +R +  P   A EEE  HRKLE  A +Y  LL + L+EQ+  +E  LA +    S           ++ A   E++ +++  A   E+ +K+ +E+ F+  +N SL  NQ+     +R  +E+  + E+E    +G LE ++R LM  LD Q
Sbjct:  205 AGMTEIPTCAVCLDRLDASASGILTTLCNHSFHCDCLFRWEGSSCPVCRYSHGDI----GSSCEVCGTADHLWICLICGHVGCGRYSGEHAKQHYQETLHTYSLELETQRVWDYAGDGYVHRLILNK---------QDGKFVEFPSPNNLSGERSQTPPTTSAEEEEGEHRKLEKLAVEYNFLLKSQLEEQRLYYERLLARVEEGESRQ---------LLNAHEHERKHLKRTNAALAEKTKKLEDELTFVRELNKSLIENQKQWKERVRLLEEQNERVEQETALRIGDLEGQVRDLMFYLDTQ 486          
BLAST of EWM20686.1 vs. NCBI_GenBank
Match: gi|695373903|ref|XP_009515160.1| (hypothetical protein PHYSODRAFT_470756 [Phytophthora sojae] >gi|348688071|gb|EGZ27885.1| hypothetical protein PHYSODRAFT_470756 [Phytophthora sojae])

HSP 1 Score: 211.46 bits (537), Expect = 6.294e-57
Identity = 130/357 (36.41%), Postives = 183/357 (51.26%), Query Frame = 0
Query:  278 DPEISTTRDHHDGTCTATSHADGEGGSSLSSLGANEENLSHCVVCLETL----AGLPPSPSAPPSLPPLSPP---ILITACNHAFHIPCLGQVPSPLCPVCRYNHDDALAHHSSACTDCGRTTDLWVCLVCAYVGCGRYHAHHSRNHYLATLHAYAIEVQTQQVWDYVGDGYVHRLLYHPYSAGGEGGGEGGKIVEVPDPNTNSNQRPRHAPLPEAMEEEMVHRKLENWAEQYTVLLSTGLQEQQTRFEARLAALRTAFSPSHRSSSSGATVVAALRQEKRQMEKRCAGARERLRKVREEVGFLSAVNASLEANQESVAASLREAQEELMKTEKERETMVGPLEERLRQLMTRLDCQ 627
            DP +S   DH D       HAD E   + + L    E  +      +      AG+   P+    L  L      IL T CNH+FH  CL +     CPVCRY+H D      S+C  CG T  LW+CL+C +VGCGRY   H++ HY  TLH Y++E++TQ+VWDY GDGYVHRL+ +          + GK VE P P++ S +R +  P   A EEE  HRKLE  A +Y  LL + L+EQ+  +E  LA +    S           ++ A   E++ ++K  A   E+ +K+ EE+ F+  +N SL  NQ      +R  +E+  + E+E    VG LE ++R LM  LD Q
Sbjct:  159 DPVVS--EDHPDSDALEEKHADEEEDVAAAPLSPRSERRASSPQMRKLFPPPPAGMTEIPTCAVCLDRLDASASGILTTLCNHSFHCDCLFRWEGSSCPVCRYSHGDI----GSSCEVCGTTEHLWICLICGHVGCGRYSGEHAKQHYQETLHTYSLELETQRVWDYAGDGYVHRLILNK---------QDGKFVEFPSPHSLSGERSQTPPTTAAEEEEGEHRKLEKLAVEYNFLLKSQLEEQRLYYERLLARVEEGESRQ---------LLNAHEHERKHLKKANAALAEKAKKLEEELTFVRELNKSLLQNQAQWKERIRILEEQNTRIEQETAVRVGDLEGQVRDLMFYLDTQ 491          
BLAST of EWM20686.1 vs. NCBI_GenBank
Match: gi|570976088|gb|ETP37961.1| (hypothetical protein, variant 1 [Phytophthora parasitica P10297])

HSP 1 Score: 211.075 bits (536), Expect = 8.456e-57
Identity = 116/304 (38.16%), Postives = 164/304 (53.95%), Query Frame = 0
Query:  327 AGLPPSPSAPPSLPPLSPP---ILITACNHAFHIPCLGQVPSPLCPVCRYNHDDALAHHSSACTDCGRTTDLWVCLVCAYVGCGRYHAHHSRNHYLATLHAYAIEVQTQQVWDYVGDGYVHRLLYHPYSAGGEGGGEGGKIVEVPDPNTNSNQRPRHAPLPEAMEEEMVHRKLENWAEQYTVLLSTGLQEQQTRFEARLAALRTAFSPSHRSSSSGATVVAALRQEKRQMEKRCAGARERLRKVREEVGFLSAVNASLEANQESVAASLREAQEELMKTEKERETMVGPLEERLRQLMTRLDCQ 627
            AG+   P+    L  L      IL T CNH+FH  CL +     CPVCRY+H D      S+C  CG    LW+CL+C +VGCGRY   H++ HY  TLH Y++E++TQ+VWDY GDGYVHRL+ +          + GK VE P PN  S +R +  P   A EEE  HRKLE  A +Y  LL + L+EQ+  +E  LA +    S           ++ A   E++ ++K      E+ +K+ EE+ F+  +N SL  NQ+     +R  +E+  + E+E    +G LE ++R LM  LD Q
Sbjct:  211 AGMTEIPTCAVCLDRLDASASGILTTLCNHSFHCDCLFRWEGSSCPVCRYSHGDI----GSSCEVCGTVEHLWICLICGHVGCGRYSGEHAKQHYQETLHTYSLELETQRVWDYAGDGYVHRLILNK---------QDGKFVEFPSPNNLSGERSQTPPTTSAEEEEGEHRKLEKLAVEYNFLLKSQLEEQRLYYERLLARVEEGESRQ---------LLNAHEHERKHLKKANTTLVEKTKKLEEELTFVRELNKSLIDNQKQWKERVRLLEEQNARIEQETALRIGDLEGQVRDLMFYLDTQ 492          
BLAST of EWM20686.1 vs. NCBI_GenBank
Match: gi|566017114|gb|ETI40025.1| (hypothetical protein, variant 1 [Phytophthora parasitica P1569])

HSP 1 Score: 211.075 bits (536), Expect = 8.897e-57
Identity = 116/304 (38.16%), Postives = 164/304 (53.95%), Query Frame = 0
Query:  327 AGLPPSPSAPPSLPPLSPP---ILITACNHAFHIPCLGQVPSPLCPVCRYNHDDALAHHSSACTDCGRTTDLWVCLVCAYVGCGRYHAHHSRNHYLATLHAYAIEVQTQQVWDYVGDGYVHRLLYHPYSAGGEGGGEGGKIVEVPDPNTNSNQRPRHAPLPEAMEEEMVHRKLENWAEQYTVLLSTGLQEQQTRFEARLAALRTAFSPSHRSSSSGATVVAALRQEKRQMEKRCAGARERLRKVREEVGFLSAVNASLEANQESVAASLREAQEELMKTEKERETMVGPLEERLRQLMTRLDCQ 627
            AG+   P+    L  L      IL T CNH+FH  CL +     CPVCRY+H D      S+C  CG    LW+CL+C +VGCGRY   H++ HY  TLH Y++E++TQ+VWDY GDGYVHRL+ +          + GK VE P PN  S +R +  P   A EEE  HRKLE  A +Y  LL + L+EQ+  +E  LA +    S           ++ A   E++ ++K      E+ +K+ EE+ F+  +N SL  NQ+     +R  +E+  + E+E    +G LE ++R LM  LD Q
Sbjct:  211 AGMTEIPTCAVCLDRLDASASGILTTLCNHSFHCDCLFRWEGSSCPVCRYSHGDI----GSSCEVCGTVEHLWICLICGHVGCGRYSGEHAKQHYQETLHTYSLELETQRVWDYAGDGYVHRLILNK---------QDGKFVEFPSPNNLSGERSQTPPTTSAEEEEGEHRKLEKLAVEYNFLLKSQLEEQRLYYERLLARVEEGESRQ---------LLNAHEHERKHLKKANTTLVEKTKKLEEELTFVRELNKSLIDNQKQWKERVRLLEEQNARIEQETALRIGDLEGQVRDLMFYLDTQ 492          
BLAST of EWM20686.1 vs. NCBI_GenBank
Match: gi|970637924|gb|KUF81699.1| (BRCA1-associated protein [Phytophthora nicotianae])

HSP 1 Score: 211.075 bits (536), Expect = 1.005e-56
Identity = 116/304 (38.16%), Postives = 164/304 (53.95%), Query Frame = 0
Query:  327 AGLPPSPSAPPSLPPLSPP---ILITACNHAFHIPCLGQVPSPLCPVCRYNHDDALAHHSSACTDCGRTTDLWVCLVCAYVGCGRYHAHHSRNHYLATLHAYAIEVQTQQVWDYVGDGYVHRLLYHPYSAGGEGGGEGGKIVEVPDPNTNSNQRPRHAPLPEAMEEEMVHRKLENWAEQYTVLLSTGLQEQQTRFEARLAALRTAFSPSHRSSSSGATVVAALRQEKRQMEKRCAGARERLRKVREEVGFLSAVNASLEANQESVAASLREAQEELMKTEKERETMVGPLEERLRQLMTRLDCQ 627
            AG+   P+    L  L      IL T CNH+FH  CL +     CPVCRY+H D      S+C  CG    LW+CL+C +VGCGRY   H++ HY  TLH Y++E++TQ+VWDY GDGYVHRL+ +          + GK VE P PN  S +R +  P   A EEE  HRKLE  A +Y  LL + L+EQ+  +E  LA +    S           ++ A   E++ ++K      E+ +K+ EE+ F+  +N SL  NQ+     +R  +E+  + E+E    +G LE ++R LM  LD Q
Sbjct:  211 AGMTEIPTCAVCLDRLDASASGILTTLCNHSFHCDCLFRWEGSSCPVCRYSHGDI----GSSCEVCGTAEHLWICLICGHVGCGRYSGEHAKQHYQETLHTYSLELETQRVWDYAGDGYVHRLILNK---------QDGKFVEFPSPNNLSGERSQTPPTTSAEEEEGEHRKLEKLAVEYNFLLKSQLEEQRLYYERLLARVEEGESRQ---------LLNAHEHERKHLKKANTTLVEKTKKLEEELTFVRELNKSLIDNQKQWKERVRLLEEQNARIEQETALRIGDLEGQVRDLMFYLDTQ 492          
BLAST of EWM20686.1 vs. NCBI_GenBank
Match: gi|567954480|gb|ETK80114.1| (hypothetical protein, variant 1 [Phytophthora parasitica] >gi|570944637|gb|ETP09894.1| hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 211.075 bits (536), Expect = 1.016e-56
Identity = 116/304 (38.16%), Postives = 164/304 (53.95%), Query Frame = 0
Query:  327 AGLPPSPSAPPSLPPLSPP---ILITACNHAFHIPCLGQVPSPLCPVCRYNHDDALAHHSSACTDCGRTTDLWVCLVCAYVGCGRYHAHHSRNHYLATLHAYAIEVQTQQVWDYVGDGYVHRLLYHPYSAGGEGGGEGGKIVEVPDPNTNSNQRPRHAPLPEAMEEEMVHRKLENWAEQYTVLLSTGLQEQQTRFEARLAALRTAFSPSHRSSSSGATVVAALRQEKRQMEKRCAGARERLRKVREEVGFLSAVNASLEANQESVAASLREAQEELMKTEKERETMVGPLEERLRQLMTRLDCQ 627
            AG+   P+    L  L      IL T CNH+FH  CL +     CPVCRY+H D      S+C  CG    LW+CL+C +VGCGRY   H++ HY  TLH Y++E++TQ+VWDY GDGYVHRL+ +          + GK VE P PN  S +R +  P   A EEE  HRKLE  A +Y  LL + L+EQ+  +E  LA +    S           ++ A   E++ ++K      E+ +K+ EE+ F+  +N SL  NQ+     +R  +E+  + E+E    +G LE ++R LM  LD Q
Sbjct:  211 AGMTEIPTCAVCLDRLDASASGILTTLCNHSFHCDCLFRWEGSSCPVCRYSHGDI----GSSCEVCGTAEHLWICLICGHVGCGRYSGEHAKQHYQETLHTYSLELETQRVWDYAGDGYVHRLILNK---------QDGKFVEFPSPNNLSGERSQTPPTTSAEEEEGEHRKLEKLAVEYNFLLKSQLEEQRLYYERLLARVEEGESRQ---------LLNAHEHERKHLKKANTTLVEKTKKLEEELTFVRELNKSLIDNQKQWKERVRLLEEQNARIEQETALRIGDLEGQVRDLMFYLDTQ 492          
The following BLAST results are available for this feature:
BLAST of EWM20686.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100508|gb|EWM20686.1|0.000e+0100.00brca1-associated protein 2 containing protein [Nan... [more]
gi|298708260|emb|CBJ48323.1|1.110e-7042.14conserved unknown protein [Ectocarpus siliculosus][more]
gi|1210520836|dbj|GAX20399.1|2.606e-6036.77BRCA1-associated protein [Fistulifera solaris][more]
gi|1210514060|dbj|GAX26842.1|8.117e-5936.21BRCA1-associated protein [Fistulifera solaris][more]
gi|301116936|ref|XP_002906196.1|5.007e-5737.83conserved hypothetical protein [Phytophthora infes... [more]
gi|695373903|ref|XP_009515160.1|6.294e-5736.41hypothetical protein PHYSODRAFT_470756 [Phytophtho... [more]
gi|570976088|gb|ETP37961.1|8.456e-5738.16hypothetical protein, variant 1 [Phytophthora para... [more]
gi|566017114|gb|ETI40025.1|8.897e-5738.16hypothetical protein, variant 1 [Phytophthora para... [more]
gi|970637924|gb|KUF81699.1|1.005e-5638.16BRCA1-associated protein [Phytophthora nicotianae][more]
gi|567954480|gb|ETK80114.1|1.016e-5638.16hypothetical protein, variant 1 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna10018rna10018Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications