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Properties
| Property Name | Value |
|---|
| Product | Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunit |
| Orig transcript id | gnl|cribi|Naga_100112g21.5444.mrna |
| Orig protein id | gnl|cribi|Naga_100112g21.5444 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002456.1 | supercontig | CM002456.1:932040..932739 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1000 ID=rna1000|Name=rna1000|organism=Nannochloropsis gaditana|type=mRNA|length=1036bp
ACAGCTAAGCGCATCCTGACTGCGGACCACGGGCCTTAATTCAGCCTTGA
AGTTTGGGAAATCACGTCACCTGCCAAGCTCCTACCACCTCCCTTTGACT
TGCCGTTCCGCTATTAGCACAAGTGCAGCATGAAATGCAGCCGAAAAGCC
GACGCTGCTGTGGAGGGAAGGACCACTTCCGGTAGCAGGCGAGGGCGCGG
TGGAAAAGGACGCGGCGGTGGTCACAGCGGGGGCAGTCACCACCACCACC
ACCGCGGTTCTCGTTTCAAGACACGGGAGTATCGGGACGGGCCGCCCTCG
GATGGCTTTCCCCTCCCCCCGGGGCAAGTCGTCCATGACGAGGAGGCGAA
TCTTGGCACGAACTTTGAAAACGCACAGAGCAGCATGGGCGCCTGGGAGC
ATCAGCGCAAGCATTTTCCCATCAAGCTCCAGATGTGGGACTTCGACCAG
TGCGACCCCAACCGCTGCACCGGACGCAAGCTCGCCCGCCTTGGCTACAT
CCAGGAAATGAAGCTCGGAGCACCGTTTCGGGGGCTTATCCTGAGCCCTG
AGGCGGACAAGGTGGTGTCGAGAGAGGACCGAGCCGTGGTGGATGCCCGG
GGCGTATCAGTGATCGATTGCTCCTGGGCGCGGCTCGCCGAAATCCCTTT
CGCCAAAATGTCCCGCGGAGTCCCCCGCCTCCTTCCCTACCTGGTGGCGG
CCAACAGCGTCAACTACGGCCGACCTTTCAAACTCACGTGCGCGGAGGCG
GTGGCGGCCGCTTTGCACATCGTCGGCTTGGAGGCGGCGGCGCAAGCGCT
CATGTCGGAGTTCTCCTGGGGACCTGAGTTTTTGCGCCTGAACGCGGAGG
TGCTGGAGAGGTATGGGAGATGCGCGGACAGCCAGGAGGTGAAGGAGGCG
GAGGATAGCTTTCTAAGGGAGTGCTTCGAGGAGATGGAGGTGCGGAGGTC
AGAGAAGGATGACCTGCCGTGCTACTATACGTCGGAAGAGGAGGAGGAGG
AGGAGAAGGAAGAGGAGGAAGAAAAGAATGAGGAGG back to topprotein sequence of rna1000 >rna1000-protein ID=rna1000-protein|Name=rna1000|organism=Nannochloropsis gaditana|type=polypeptide|length=126bp
MVRTFIPQPTQDDAQVLLAKRFFVVGCLGLPWLWAVSVLYFWPKLHGNET
AEQTGQAHGDSNLNREGPRVAKSELRKWVNRSLVGAIVGFGLLFAWLIFF
QLRWQKWGYGVLPYMVSAPQSYSSGW back to topmRNA from alignment at CM002456.1:932040..932739+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1000 ID=rna1000|Name=rna1000|organism=Nannochloropsis gaditana|type=mRNA|length=700bp|location=Sequence derived from alignment at CM002456.1:932040..932739+ (Nannochloropsis gaditana)
TCAGGATGCGCTTAGCTGTGCGTACATACAATAGAAATATCAGGAGCATG
TCAATTTCATTGCGCATAGTCTCGCAAAGAAGCGCCCAAGGTGGGTTCCA
ACTTCGCATTTCCAGCCTCCTATCGCCCGGTCACGTCAACAAGTCGCTCT
CCGTCTCATTCCCATTTCTTCAAgcctcattttcttcctgccACTATCTC
ACGGCGCTCAGGTGTTGTGAGCATCCTTCAACAAAGCAATGGTGCGCACC
TTTATACCGCAGCCAACACAGGATGATGCTCAAGTCCTACTGGCCAAACG
GTTTTTCGTAGTGGGCTGCCTGGGCTTGCCCTGGCTGTGGGCCGTCTCTG
TGCTTTACTTCTGGCCTAAACTCCACGGAAATGAAACCGCTGAGCAGACT
GGCCAAGCGCATGGAGACAGCAATTTGAACAGAGAAGGACCACGCGTCGC
GAAGTCGGAATTACGGAAGTGGGTAAACCGCTCCTTAGTGGGAGCCATAG
TAGGCTTcggcctcctctttgctTGGCTTATTTTCTTCCAACTGCGATGG
CAGAAATGGGGTTACGGCGTGCTCCCCTACATGGTCAGCGCGCCACAGAG
CTATTCGTCGGGATGGTAAAGCAAAGTAAAGGAGCAAGGACAAAATAGAC
AAAATTTGTAGATTTAATCTGTGGCCCGTGAGTTGTGCATAGCACGAGGA
back to topCoding sequence (CDS) from alignment at CM002456.1:932040..932739+ >rna1000 ID=rna1000|Name=rna1000|organism=Nannochloropsis gaditana|type=CDS|length=381bp|location=Sequence derived from alignment at CM002456.1:932040..932739+ (Nannochloropsis gaditana)
ATGGTGCGCACCTTTATACCGCAGCCAACACAGGATGATGCTCAAGTCCT
ACTGGCCAAACGGTTTTTCGTAGTGGGCTGCCTGGGCTTGCCCTGGCTGT
GGGCCGTCTCTGTGCTTTACTTCTGGCCTAAACTCCACGGAAATGAAACC
GCTGAGCAGACTGGCCAAGCGCATGGAGACAGCAATTTGAACAGAGAAGG
ACCACGCGTCGCGAAGTCGGAATTACGGAAGTGGGTAAACCGCTCCTTAG
TGGGAGCCATAGTAGGCTTcggcctcctctttgctTGGCTTATTTTCTTC
CAACTGCGATGGCAGAAATGGGGTTACGGCGTGCTCCCCTACATGGTCAG
CGCGCCACAGAGCTATTCGTCGGGATGGTAA back to top
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