EWM29661.1, cds999 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29661.1 vs. NCBI_GenBank
Match: gi|553179153|ref|XP_005852657.1| (hypothetical protein NGA_2091620 [Nannochloropsis gaditana CCMP526] >gi|422295876|gb|EKU23175.1| hypothetical protein NGA_2091620 [Nannochloropsis gaditana CCMP526] >gi|585112235|gb|EWM29661.1| Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunit [Nannochloropsis gaditana]) HSP 1 Score: 258.84 bits (660), Expect = 2.063e-87 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0 Query: 1 MVRTFIPQPTQDDAQVLLAKRFFVVGCLGLPWLWAVSVLYFWPKLHGNETAEQTGQAHGDSNLNREGPRVAKSELRKWVNRSLVGAIVGFGLLFAWLIFFQLRWQKWGYGVLPYMVSAPQSYSSGW 126 MVRTFIPQPTQDDAQVLLAKRFFVVGCLGLPWLWAVSVLYFWPKLHGNETAEQTGQAHGDSNLNREGPRVAKSELRKWVNRSLVGAIVGFGLLFAWLIFFQLRWQKWGYGVLPYMVSAPQSYSSGW Sbjct: 1 MVRTFIPQPTQDDAQVLLAKRFFVVGCLGLPWLWAVSVLYFWPKLHGNETAEQTGQAHGDSNLNREGPRVAKSELRKWVNRSLVGAIVGFGLLFAWLIFFQLRWQKWGYGVLPYMVSAPQSYSSGW 126
BLAST of EWM29661.1 vs. NCBI_GenBank
Match: gi|224013900|ref|XP_002296614.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220968966|gb|EED87310.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 64.3142 bits (155), Expect = 1.392e-10 Identity = 41/128 (32.03%), Postives = 63/128 (49.22%), Query Frame = 0 Query: 15 QVLLAKRFFVVGCLGLPWLWAVSVLYF-------------WPKLHGNETAEQTGQAHGDSNLNREGPRVA---KSELRKWVNRSLVGAIVGFGLLFAWLIFFQLRWQKWGYGVLPYMVSAPQSYSSGW 126 ++ L+KR F VGCLGLPWLW +VLYF WP +E++ + E + + EL KWV RS GA++ + AW+I FQ+ K +G +++ A + ++GW Sbjct: 20 EITLSKRMFFVGCLGLPWLWICNVLYFRLKVFGPMVMFDYWPGQKCKYISERSAANEEGGDEENEEQLFSLRERQELEKWVKRSTRGAMLVVSVFLAWVITFQV--NKDNFGDRWFVMDATEEEATGW 145
BLAST of EWM29661.1 vs. NCBI_GenBank
Match: gi|676390883|ref|XP_009038719.1| (hypothetical protein AURANDRAFT_29068 [Aureococcus anophagefferens] >gi|323450663|gb|EGB06543.1| hypothetical protein AURANDRAFT_29068 [Aureococcus anophagefferens]) HSP 1 Score: 56.9954 bits (136), Expect = 4.359e-8 Identity = 34/108 (31.48%), Postives = 47/108 (43.52%), Query Frame = 0 Query: 5 FIPQPTQDDAQVLLAKRFFVVGCLGLPWLWAVSVLYFWPKLHGNETAEQTGQAHGDSNLNREGPRVAKSELRKWVNRSLVGAIVGFGLLFAWLIFFQLRWQKWGYGVL 112 ++P+P DA + A+R F+VG LP +W V V FW L + + ELR WV RS VG + AW I FQ +++ WG L Sbjct: 15 YLPEPKLRDADI--ARRMFLVGSCLLPVIWLVCVARFWRALAAAPSGAEA------------------EELRTWVLRSAVGLACAVAIFTAWTIIFQTKYEAWGLEFL 102 The following BLAST results are available for this feature:
BLAST of EWM29661.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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