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Properties
| Property Name | Value |
|---|
| TranscriptId | 533229 |
| Track | FilteredModels2 |
| ProteinId | 533143 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_31 | supercontig | scaffold_31:17614..18636 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9595 ID=mRNA_9595|Name=jgi.p|Nanoce1779_2|533143|organism=Nannochloropsis oceanica|type=mRNA|length=963bp
ATGGTGGATCAGCTGCACTGCAGGTATGCAGCACTGTATGTGGGTCTGTG
TGCGTTCCCTTCACTTTTCCAATTTAATTCAAGTGACGACCCAACCATTT
CCACGGCCCTCGTCCCCTCTCTTTCCAACACACAGCGTGCTCCTCGTCTC
TATGTTCCTGATGCACTCCTTCGTCCTGGCGCGCCTATCAGCCTTTCTTC
GGACCAGCTTCATTATTTGCGTAATGTCATGCGCCTGCGCGCAGGGGCCG
CCGTGCGTGCGTTTAATGAAATGGATGGGGAGTGGGCATGTGCCCTTGTG
AGCAGTAGAGGGGGAGGAACGTTGTCGGTTGTGGCTCAAGAGAGGATGAG
GAAGGGAGGGGAGGAGGGACGGGAACCGCCGTTGCGCCTATGTTTCGCGC
CTCTAAAGAAGGCGAGGATGAAGACATTATTTGAGAAGGCGACGGAGTTG
GGCGTTACCCACCTGCAGCCTGTCCTGACTGAGTACACTGACGTGGTGGA
GACACACACAGAGGGGGTGTTGGGTAAGATGGAGGGAGGCCTGGTGGAGG
CTGCGGAGCAATGTGAAAGGATGAGCATCCCTCAAATTCTTCCGCCGGTG
ACATTTGCGGCATTGATTGAGGAAGAAGAGGAGAAGATAGGGGGAAGGTT
GTATATTTGTAGAGAACGAGCGGGGGCACGGCCTATCTGGGAGGTACTGG
AAGAGGAGAAGGAGGAGGAGGAGGAGGAGGGAAATGGAGGAGAGGGAATG
AACGGCGTGCCTTCCTTTCTAATTGGCCCGGAAGGAGGCTTTTCACCGAA
AGAGTTAAAGGCGATGGAAGGGAGGATGAGATTGGTGTCCTTGGGGCCCT
CGGTCTTGCGGGCGGAGACGGCAGGGGTGGTTGCCTTGGGAGTGTATGTG
GCATGGCGCGAAGGGAAGAGGGCAAAGAAGGAAGGAAAGGGAGGAACGAT
TCCAGTAGAATGA back to topprotein sequence of jgi.p|Nanoce1779_2|533143 >mRNA_9595-protein ID=mRNA_9595-protein|Name=jgi.p|Nanoce1779_2|533143|organism=Nannochloropsis oceanica|type=polypeptide|length=321bp
MVDQLHCRYAALYVGLCAFPSLFQFNSSDDPTISTALVPSLSNTQRAPRL
YVPDALLRPGAPISLSSDQLHYLRNVMRLRAGAAVRAFNEMDGEWACALV
SSRGGGTLSVVAQERMRKGGEEGREPPLRLCFAPLKKARMKTLFEKATEL
GVTHLQPVLTEYTDVVETHTEGVLGKMEGGLVEAAEQCERMSIPQILPPV
TFAALIEEEEEKIGGRLYICRERAGARPIWEVLEEEKEEEEEEGNGGEGM
NGVPSFLIGPEGGFSPKELKAMEGRMRLVSLGPSVLRAETAGVVALGVYV
AWREGKRAKKEGKGGTIPVE* back to topmRNA from alignment at scaffold_31:17614..18636- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9595 ID=mRNA_9595|Name=jgi.p|Nanoce1779_2|533143|organism=Nannochloropsis oceanica|type=mRNA|length=1023bp|location=Sequence derived from alignment at scaffold_31:17614..18636- (Nannochloropsis oceanica)
ATGGTGGATCAGCTGCACTGCAGGTATGCAGCACTGTATGTGGGTCTGTG
TGCGTTCCCTTCACTTTTCCAATTTAATTCAAGTGACGACCCAACCATTT
CCACGGCCCTCGTCCCCTCTCTTTCCAACACACAGCGTGCTCCTCGTCTC
TATGTTCCTGATGCACTCCTTCGTCCTGGCGCGCCTATCAGCCTTTCTTC
GGACCAGCTTCATTATTTGCGTAATGTCATGCGCCTGCGCGCAGGGGCCG
CCGTGCGTGCGTTTAATGAAATGGATGGGGAGTGGGCATGTGCCCTTGTG
AGCAGTAGTGACGGGATAGGTGGAGAGGGAGGAAAGGGTGGAAGGGTAAA
GAAAAATCGTAGTGGAGGAGGGGGAGGAACGTTGTCGGTTGTGGCTCAAG
AGAGGATGAGGAAGGGAGGGGAGGAGGGACGGGAACCGCCGTTGCGCCTA
TGTTTCGCGCCTCTAAAGAAGGCGAGGATGAAGACATTATTTGAGAAGGC
GACGGAGTTGGGCGTTACCCACCTGCAGCCTGTCCTGACTGAGTACACTG
ACGTGGTGGAGACACACACAGAGGGGGTGTTGGGTAAGATGGAGGGAGGC
CTGGTGGAGGCTGCGGAGCAATGTGAAAGGATGAGCATCCCTCAAATTCT
TCCGCCGGTGACATTTGCGGCATTGATTGAGGAAGAAGAGGAGAAGATAG
GGGGAAGGTTGTATATTTGTAGAGAACGAGCGGGGGCACGGCCTATCTGG
GAGGTACTGGAAGAGGAGAAGGAGGAGGAGGAGGAGGAGGGAAATGGAGG
AGAGGGAATGAACGGCGTGCCTTCCTTTCTAATTGGCCCGGAAGGAGGCT
TTTCACCGAAAGAGTTAAAGGCGATGGAAGGGAGGATGAGATTGGTGTCC
TTGGGGCCCTCGGTCTTGCGGGCGGAGACGGCAGGGGTGGTTGCCTTGGG
AGTGTATGTGGCATGGCGCGAAGGGAAGAGGGCAAAGAAGGAAGGAAAGG
GAGGAACGATTCCAGTAGAATGA back to topCoding sequence (CDS) from alignment at scaffold_31:17614..18636- >mRNA_9595 ID=mRNA_9595|Name=jgi.p|Nanoce1779_2|533143|organism=Nannochloropsis oceanica|type=CDS|length=1926bp|location=Sequence derived from alignment at scaffold_31:17614..18636- (Nannochloropsis oceanica)
GAGGGGGAGGAACGTTGTCGGTTGTGGCTCAAGAGAGGATGAGGAAGGGA
GGGGAGGAGGGACGGGAACCGCCGTTGCGCCTATGTTTCGCGCCTCTAAA
GAAGGCGAGGATGAAGACATTATTTGAGAAGGCGACGGAGTTGGGCGTTA
CCCACCTGCAGCCTGTCCTGACTGAGTACACTGACGTGGTGGAGACACAC
ACAGAGGGGGTGTTGGGTAAGATGGAGGGAGGCCTGGTGGAGGCTGCGGA
GCAATGTGAAAGGATGAGCATCCCTCAAATTCTTCCGCCGGTGACATTTG
CGGCATTGATTGAGGAAGAAGAGGAGAAGATAGGGGGAAGGTTGTATATT
TGTAGAGAACGAGCGGGGGCACGGCCTATCTGGGAGGTACTGGAAGAGGA
GAAGGAGGAGGAGGAGGAGGAGGGAAATGGAGGAGAGGGAATGAACGGCG
TGCCTTCCTTTCTAATTGGCCCGGAAGGAGGCTTTTCACCGAAAGAGTTA
AAGGCGATGGAAGGGAGGATGAGATTGGTGTCCTTGGGGCCCTCGGTCTT
GCGGGCGGAGACGGCAGGGGTGGTTGCCTTGGGAGTGTATGTGGCATGGC
GCGAAGGGAAGAGGGCAAAGAAGGAAGGAAAGGGAGGAACGATTCCAGTA
GAATGAATGGTGGATCAGCTGCACTGCAGGTATGCAGCACTGTATGTGGG
TCTGTGTGCGTTCCCTTCACTTTTCCAATTTAATTCAAGTGACGACCCAA
CCATTTCCACGGCCCTCGTCCCCTCTCTTTCCAACACACAGCGTGCTCCT
CGTCTCTATGTTCCTGATGCACTCCTTCGTCCTGGCGCGCCTATCAGCCT
TTCTTCGGACCAGCTTCATTATTTGCGTAATGTCATGCGCCTGCGCGCAG
GGGCCGCCGTGCGTGCGTTTAATGAAATGGATGGGGAGTGGGCATGTGCC
CTTGTGAGCAGTAGAGGGGGAGGAACGTTGTCGGTTGTGGCTCAAGAGAG
GATGAGGAAGGGAGGGGAGGAGGGACGGGAACCGCCGTTGCGCCTATGTT
TCGCGCCTCTAAAGAAGGCGAGGATGAAGACATTATTTGAGAAGGCGACG
GAGTTGGGCGTTACCCACCTGCAGCCTGTCCTGACTGAGTACACTGACGT
GGTGGAGACACACACAGAGGGGGTGTTGGGTAAGATGGAGGGAGGCCTGG
TGGAGGCTGCGGAGCAATGTGAAAGGATGAGCATCCCTCAAATTCTTCCG
CCGGTGACATTTGCGGCATTGATTGAGGAAGAAGAGGAGAAGATAGGGGG
AAGGTTGTATATTTGTAGAGAACGAGCGGGGGCACGGCCTATCTGGGAGG
TACTGGAAGAGGAGAAGGAGGAGGAGGAGGAGGAGGGAAATGGAGGAGAG
GGAATGAACGGCGTGCCTTCCTTTCTAATTGGCCCGGAAGGAGGCTTTTC
ACCGAAAGAGTTAAAGGCGATGGAAGGGAGGATGAGATTGGTGTCCTTGG
GGCCCTCGGTCTTGCGGGCGGAGACGGCAGGGGTGGTTGCCTTGGGAGTG
TATGTGGCATGGCGCGAAGGGAAGAGGGCAAAGAAGGAAGGAAAGGGAGG
AACGATTCCAGTAGAATGAATGGTGGATCAGCTGCACTGCAGGTATGCAG
CACTGTATGTGGGTCTGTGTGCGTTCCCTTCACTTTTCCAATTTAATTCA
AGTGACGACCCAACCATTTCCACGGCCCTCGTCCCCTCTCTTTCCAACAC
ACAGCGTGCTCCTCGTCTCTATGTTCCTGATGCACTCCTTCGTCCTGGCG
CGCCTATCAGCCTTTCTTCGGACCAGCTTCATTATTTGCGTAATGTCATG
CGCCTGCGCGCAGGGGCCGCCGTGCGTGCGTTTAATGAAATGGATGGGGA
GTGGGCATGTGCCCTTGTGAGCAGTA back to top
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