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Properties
| Property Name | Value |
|---|
| TranscriptId | 674085 |
| Track | FilteredModels2 |
| ProteinId | 673999 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_34 | supercontig | scaffold_34:116070..118624 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_9488 ID=mRNA_9488|Name=jgi.p|Nanoce1779_2|673999|organism=Nannochloropsis oceanica|type=mRNA|length=2162bp
ATAGAAGGTCCGATGGAGGCGCCTTTACCACGTGCGCACTGTCCTGATCC
TGGCCTGGCTGTGCTTGCCTGTGCAGAGATGGGATGTGGGACGGAAGGGA
TTGTCAGCTGAACCGTGGTAGATAAGTGTGTGGGTCGTGATAGAGTAGAG
ATGTGGCTGCGGGCCATGGACCTTCCTTGGGCAGGAAACTGAGAGCAGCT
CGCTTTTCCTCTCCTAGTCCAACTACTTCGTGCCTGAATTCATACATGCC
CATGTCACTCTGCTGCGAATCGGAACCACTGACTCATGCCACCACTACAA
CACACAGATAGGCAGCTGGTCAGGTCAGGCCTGGCCCGAGGCGCCGTTGC
TTCCTGAGTAGGTATAGCAAGCCCAAGCTCTATCAACTCCTGCCGCTCGC
ACCATCGCCCACACCACTAGAGGCAAAATAAATTATTTACAATAATATAC
GACCATTCGGACCGTGGATACCGTAACACCCACGCGGCACCACCGCAGGC
AATATGTCGCAAAAAATGACGAGCTTTCTCAAAGGTGTTCGGGAATACGT
CTACCCTGTGCTAGACAAATCTGCCTTTTTAGAGCGAGGCGTGCTCACTC
CTCAAGAGTTCGTGCAAGCCGGAGACCAGCTCGTCTACCGCTGCCCTACC
TGGAGCTGGGAAGGTGGAGATCCGAGCAAGGCGAAGAGTTATTTACCTCT
CGACAAGCAATATTTGCAGACGAGGAATGTGCCGTGTGGGCAGAGGGCAA
GTGTGTTTGAGGACGAATATGAGGAGGAGGAGGAGGTGGAGGGAGGGATG
GAAGGAGGGATGGGGGAGGAGAAAGATGGGGTGGATGGGGCGTGGATGGC
GACGCACGTGAAGAAAGGAGGGAGGGGGGGAAGGAGGAATGGCGGTGAGG
AGGAGGAGGAGGGGGTGGTGATCACGTTGGGAAGGGACGATGGGGAGGGA
GAGAGGGAGGGGGGCATGCTGCCGCGGAGGGAGGGAAAGGGGGAGGGGGC
GGCGGGGGAGAAGGAGGAGGGAGGGAATGGAGTGTTGTTGGGAGGGGTGG
GAAGTACACTCAAGGTCGTAGACGGACATTTCGCACTCAAGGAGCAGGAA
GGGAAAGAGGGCGAGGTGCCGAGGGAGGGAGGGGTTGAGGGTGAGGGGTC
CGACGAGGGGTATGCGGACATGGCTTCGTATGAAGAGGCCGGACTAGGTG
GACAGGAAGGAGGGGAGGAAGGGAGGGAGGGAGGGGAGGACGTGGCGATG
TTACCGTCGGAGAGCTTACCGTACATGAAGACGGAGGAGCCGCAGGCGTC
GCTGGTCGCTTCAAGGTCTTACGATATATCCATCACTTACGACAAGTACT
ACCAGACACCGCGGGCCTGGCTTTTGGGCTATGACGAGGAAGGTCAGCCT
CTGTCAGCCCCCGCTCTCTTTGAAGATATTCAGCAGGATTATGCTCACCG
CACCGTCACGATTGAGACCCACCCCCACACCGGTGTGCCTCAAGCGTCCA
TCCACCCTTGCCAGCACGCCAATGTCATGAAGAATATTGTGCGGAATCTA
TCTCAGGGGAGGGAGGGAGGAAGGGAGGGAGGGGGGGCCACGCATGGACC
AGTATTTGTTCATCTTTTTGAAATTCTTGCAGAGCATGATTCCTACGATT
GATTATGACTTCACGGTGGAGGTGGACGTGGGGACAGGAGCCAGAGAGGG
AGGAAAGGTGGAGGACGAGGGGATAGTAATGGTATTGGAGGAAATTATGG
AGGGGTGAAGTGGAAAAGTGAAGTAGGGACGGAGGCTGTACTTATCTGTT
GATACAAAGAAGGGCATGTAAGAAAGCAGGCGGATGCAGGAGGTTGAGGA
GGAAGATAGGTAGGAGGTGAAGGAGAAAAGCGAGCGAAAGAGGACGGCAC
GAATTACCAACAAACTAACGCATACCCTCACCAGTGACATTCTCATCTAA
TCCTCGTTATCTTCTTCTACTTGTTCTTCTTGAGATTTTTTGGTGAGACC
GACGCGGACCATGATTGAGCCAAAAGGGCATCCAGGCAGACATGCGATTT
TTTTTCCCCTCATAAAAGACAAAAAAGTACGAGTATCTCACTATGTTGCT
TGCCCACTTGAACCGAAATACCAAGTTATGAAAAATGAAACGACGAGTTG
AAAAGAAGAAAC back to topprotein sequence of jgi.p|Nanoce1779_2|673999 >mRNA_9488-protein ID=mRNA_9488-protein|Name=jgi.p|Nanoce1779_2|673999|organism=Nannochloropsis oceanica|type=polypeptide|length=383bp
MSQKMTSFLKGVREYVYPVLDKSAFLERGVLTPQEFVQAGDQLVYRCPTW
SWEGGDPSKAKSYLPLDKQYLQTRNVPCGQRASVFEDEYEEEEEVEGGME
GGMGEEKDGVDGAWMATHVKKGGRGGRRNGGEEEEEGVVITLGRDDGEGE
REGGMLPRREGKGEGAAGEKEEGGNGVLLGGVGSTLKVVDGHFALKEQEG
KEGEVPREGGVEGEGSDEGYADMASYEEAGLGGQEGGEEGREGGEDVAML
PSESLPYMKTEEPQASLVASRSYDISITYDKYYQTPRAWLLGYDEEGQPL
SAPALFEDIQQDYAHRTVTIETHPHTGVPQASIHPCQHANVMKNIVRNLS
QGREGGREGGGATHGPVFVHLFEILAEHDSYD* back to topmRNA from alignment at scaffold_34:116070..118624- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_9488 ID=mRNA_9488|Name=jgi.p|Nanoce1779_2|673999|organism=Nannochloropsis oceanica|type=mRNA|length=2555bp|location=Sequence derived from alignment at scaffold_34:116070..118624- (Nannochloropsis oceanica)
ATAGAAGGTCCGATGGAGGCGCCTTTACCACGTGCGCACTGTCCTGATCC
TGGCCTGGCTGTGCTTGCCTGTGCAGAGATGGGATGTGGGACGGAAGGGA
TTGTCAGCTGAACCGTGGTAGATAAGTGTGTGGGTCGTGATAGAGTAGAG
ATGTGGCTGCGGGCCATGGACCTTCCTTGGGCAGGAAACTGAGAGCAGCT
CGCTTTTCCTCTCCTAGTCCAACTACTTCGTGCCTGAATTCATACATGCC
CATGTCACTCTGCTGCGAATCGGAACCACTGACTCATGCCACCACTACAA
CACACAGATAGGCAGCTGGTCAGGTCAGGCCTGGCCCGAGGCGCCGTTGC
TTCCTGAGTAGGTATAGCAAGCCCAAGCTCTATCAACTCCTGCCGCTCGC
ACCATCGCCCACACCACTAGAGGCAAAATAAATTATTTACAATAATATAC
GACCATTCGGACCGTGGATACCGTAACACCCACGCGGCACCACCGCAGGC
AATATGTCGCAAAAAATGACGAGCTTTCTCAAAGGTGTTCGGGAATACGT
CTACCCTGTGCTAGACAAATCTGCCTTTTTAGAGCGGTGAGAGCTTATCT
GCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTTTTCAGTCTCACCATTAGT
GCTCCCTCCAGCCAGACCACCTCATCCTTCTGTTCTGTGCTTTCCTGCAT
TATCATGCCCCAGTCAAATCAAGACCGTCGCAATCCAGCGGCATCCTCAC
TTGATCTTCCCTTTCCTTCTCCCTCACCTACTTAGAGGCGTGCTCACTCC
TCAAGAGTTCGTGCAAGCCGGAGACCAGCTCGTCTACCGCTGCCCTACCT
GGAGCTGGGAAGGTGGAGATCCGAGCAAGGCGAAGAGTTATTTACCTCTC
GACAAGCAATATTTGCAGACGAGGAATGTGCCGTGTGGGCAGAGGGCAAG
TGTGTTTGAGGACGAATATGAGGAGGAGGAGGAGGTGGAGGGAGGGATGG
AAGGAGGGATGGGGGAGGAGAAAGATGGGGTGGATGGGGCGTGGATGGCG
ACGCACGTGAAGAAAGGAGGGAGGGGGGGAAGGAGGAATGGCGGTGAGGA
GGAGGAGGAGGGGGTGGTGATCACGTTGGGAAGGGACGATGGGGAGGGAG
AGAGGGAGGGGGGCATGCTGCCGCGGAGGGAGGGAAAGGGGGAGGGGGCG
GCGGGGGAGAAGGAGGAGGGAGGGAATGGAGTGTTGTTGGGAGGGGTGGG
AAGTACACTCAAGGTCGTAGACGGACATTTCGCACTCAAGGAGCAGGAAG
GGAAAGAGGGCGAGGTGCCGAGGGAGGGAGGGGTTGAGGGTGAGGGGTCC
GACGAGGGGTATGCGGACATGGCTTCGTATGAAGAGGCCGGACTAGGTGG
ACAGGAAGGAGGGGAGGAAGGGAGGGAGGGAGGGGAGGACGTGGCGATGT
TACCGTCGGAGAGCTTACCGTACATGAAGACGGAGGAGCCGCAGGCGTCG
CTGGTCGCTTCAAGGTCTTACGATATATCCATCACTTACGACAAGTACTA
CCAGACACCGCGGGCCTGGCTTTTGGGCTATGACGAGGTAATCTTTCCCT
CTTACCCCATTTTGAGGACTAGGGCGAGTTGTGCTGTATTTCTATCTGAA
ATCGATTTATTTATTTATTTTTCACTTGAAACGTGTTTAAATTAGGCAGT
GCATTTATTTATTTATTCCTACCACAAATAATCTTATTACCCGCCATCCT
GTATTACCCGCCATCCTGTGCATATTAATAGGAAGGTCAGCCTCTGTCAG
CCCCCGCTCTCTTTGAAGATATTCAGCAGGATTATGCTCACCGCACCGTC
ACGATTGAGACCCACCCCCACACCGGTGTGCCTCAAGCGTCCATCCACCC
TTGCCAGCACGCCAATGTCATGAAGAATATTGTGCGGAATCTATCTCAGG
GGAGGGAGGGAGGAAGGGAGGGAGGGGGGGCCACGCATGGACCAGTATTT
GTTCATCTTTTTGAAATTCTTGCAGAGCATGATTCCTACGATTGATTATG
ACTTCACGGTGGAGGTGGACGTGGGGACAGGAGCCAGAGAGGGAGGAAAG
GTGGAGGACGAGGGGATAGTAATGGTATTGGAGGAAATTATGGAGGGGTG
AAGTGGAAAAGTGAAGTAGGGACGGAGGCTGTACTTATCTGTTGATACAA
AGAAGGGCATGTAAGAAAGCAGGCGGATGCAGGAGGTTGAGGAGGAAGAT
AGGTAGGAGGTGAAGGAGAAAAGCGAGCGAAAGAGGACGGCACGAATTAC
CAACAAACTAACGCATACCCTCACCAGTGACATTCTCATCTAATCCTCGT
TATCTTCTTCTACTTGTTCTTCTTGAGATTTTTTGGTGAGACCGACGCGG
ACCATGATTGAGCCAAAAGGGCATCCAGGCAGACATGCGATTTTTTTTCC
CCTCATAAAAGACAAAAAAGTACGAGTATCTCACTATGTTGCTTGCCCAC
TTGAACCGAAATACCAAGTTATGAAAAATGAAACGACGAGTTGAAAAGAA
GAAAC back to topCoding sequence (CDS) from alignment at scaffold_34:116070..118624- >mRNA_9488 ID=mRNA_9488|Name=jgi.p|Nanoce1779_2|673999|organism=Nannochloropsis oceanica|type=CDS|length=3447bp|location=Sequence derived from alignment at scaffold_34:116070..118624- (Nannochloropsis oceanica)
GAAGGTCAGCCTCTGTCAGCCCCCGCTCTCTTTGAAGATATTCAGCAGGA
TTATGCTCACCGCACCGTCACGATTGAGACCCACCCCCACACCGGTGTGC
CTCAAGCGTCCATCCACCCTTGCCAGCACGCCAATGTCATGAAGAATATT
GTGCGGAATCTATCTCAGGGGAGGGAGGGAGGAAGGGAGGGAGGGGGGGC
CACGCATGGACCAGTATTTGTTCATCTTTTTGAAATTCTTGCAGAGCATG
ATTCCTACGATTGAAGGCGTGCTCACTCCTCAAGAGTTCGTGCAAGCCGG
AGACCAGCTCGTCTACCGCTGCCCTACCTGGAGCTGGGAAGGTGGAGATC
CGAGCAAGGCGAAGAGTTATTTACCTCTCGACAAGCAATATTTGCAGACG
AGGAATGTGCCGTGTGGGCAGAGGGCAAGTGTGTTTGAGGACGAATATGA
GGAGGAGGAGGAGGTGGAGGGAGGGATGGAAGGAGGGATGGGGGAGGAGA
AAGATGGGGTGGATGGGGCGTGGATGGCGACGCACGTGAAGAAAGGAGGG
AGGGGGGGAAGGAGGAATGGCGGTGAGGAGGAGGAGGAGGGGGTGGTGAT
CACGTTGGGAAGGGACGATGGGGAGGGAGAGAGGGAGGGGGGCATGCTGC
CGCGGAGGGAGGGAAAGGGGGAGGGGGCGGCGGGGGAGAAGGAGGAGGGA
GGGAATGGAGTGTTGTTGGGAGGGGTGGGAAGTACACTCAAGGTCGTAGA
CGGACATTTCGCACTCAAGGAGCAGGAAGGGAAAGAGGGCGAGGTGCCGA
GGGAGGGAGGGGTTGAGGGTGAGGGGTCCGACGAGGGGTATGCGGACATG
GCTTCGTATGAAGAGGCCGGACTAGGTGGACAGGAAGGAGGGGAGGAAGG
GAGGGAGGGAGGGGAGGACGTGGCGATGTTACCGTCGGAGAGCTTACCGT
ACATGAAGACGGAGGAGCCGCAGGCGTCGCTGGTCGCTTCAAGGTCTTAC
GATATATCCATCACTTACGACAAGTACTACCAGACACCGCGGGCCTGGCT
TTTGGGCTATGACGAGATGTCGCAAAAAATGACGAGCTTTCTCAAAGGTG
TTCGGGAATACGTCTACCCTGTGCTAGACAAATCTGCCTTTTTAGAGCGG
AAGGTCAGCCTCTGTCAGCCCCCGCTCTCTTTGAAGATATTCAGCAGGAT
TATGCTCACCGCACCGTCACGATTGAGACCCACCCCCACACCGGTGTGCC
TCAAGCGTCCATCCACCCTTGCCAGCACGCCAATGTCATGAAGAATATTG
TGCGGAATCTATCTCAGGGGAGGGAGGGAGGAAGGGAGGGAGGGGGGGCC
ACGCATGGACCAGTATTTGTTCATCTTTTTGAAATTCTTGCAGAGCATGA
TTCCTACGATTGAAGGCGTGCTCACTCCTCAAGAGTTCGTGCAAGCCGGA
GACCAGCTCGTCTACCGCTGCCCTACCTGGAGCTGGGAAGGTGGAGATCC
GAGCAAGGCGAAGAGTTATTTACCTCTCGACAAGCAATATTTGCAGACGA
GGAATGTGCCGTGTGGGCAGAGGGCAAGTGTGTTTGAGGACGAATATGAG
GAGGAGGAGGAGGTGGAGGGAGGGATGGAAGGAGGGATGGGGGAGGAGAA
AGATGGGGTGGATGGGGCGTGGATGGCGACGCACGTGAAGAAAGGAGGGA
GGGGGGGAAGGAGGAATGGCGGTGAGGAGGAGGAGGAGGGGGTGGTGATC
ACGTTGGGAAGGGACGATGGGGAGGGAGAGAGGGAGGGGGGCATGCTGCC
GCGGAGGGAGGGAAAGGGGGAGGGGGCGGCGGGGGAGAAGGAGGAGGGAG
GGAATGGAGTGTTGTTGGGAGGGGTGGGAAGTACACTCAAGGTCGTAGAC
GGACATTTCGCACTCAAGGAGCAGGAAGGGAAAGAGGGCGAGGTGCCGAG
GGAGGGAGGGGTTGAGGGTGAGGGGTCCGACGAGGGGTATGCGGACATGG
CTTCGTATGAAGAGGCCGGACTAGGTGGACAGGAAGGAGGGGAGGAAGGG
AGGGAGGGAGGGGAGGACGTGGCGATGTTACCGTCGGAGAGCTTACCGTA
CATGAAGACGGAGGAGCCGCAGGCGTCGCTGGTCGCTTCAAGGTCTTACG
ATATATCCATCACTTACGACAAGTACTACCAGACACCGCGGGCCTGGCTT
TTGGGCTATGACGAGATGTCGCAAAAAATGACGAGCTTTCTCAAAGGTGT
TCGGGAATACGTCTACCCTGTGCTAGACAAATCTGCCTTTTTAGAGCGGA
AGGTCAGCCTCTGTCAGCCCCCGCTCTCTTTGAAGATATTCAGCAGGATT
ATGCTCACCGCACCGTCACGATTGAGACCCACCCCCACACCGGTGTGCCT
CAAGCGTCCATCCACCCTTGCCAGCACGCCAATGTCATGAAGAATATTGT
GCGGAATCTATCTCAGGGGAGGGAGGGAGGAAGGGAGGGAGGGGGGGCCA
CGCATGGACCAGTATTTGTTCATCTTTTTGAAATTCTTGCAGAGCATGAT
TCCTACGATTGAAGGCGTGCTCACTCCTCAAGAGTTCGTGCAAGCCGGAG
ACCAGCTCGTCTACCGCTGCCCTACCTGGAGCTGGGAAGGTGGAGATCCG
AGCAAGGCGAAGAGTTATTTACCTCTCGACAAGCAATATTTGCAGACGAG
GAATGTGCCGTGTGGGCAGAGGGCAAGTGTGTTTGAGGACGAATATGAGG
AGGAGGAGGAGGTGGAGGGAGGGATGGAAGGAGGGATGGGGGAGGAGAAA
GATGGGGTGGATGGGGCGTGGATGGCGACGCACGTGAAGAAAGGAGGGAG
GGGGGGAAGGAGGAATGGCGGTGAGGAGGAGGAGGAGGGGGTGGTGATCA
CGTTGGGAAGGGACGATGGGGAGGGAGAGAGGGAGGGGGGCATGCTGCCG
CGGAGGGAGGGAAAGGGGGAGGGGGCGGCGGGGGAGAAGGAGGAGGGAGG
GAATGGAGTGTTGTTGGGAGGGGTGGGAAGTACACTCAAGGTCGTAGACG
GACATTTCGCACTCAAGGAGCAGGAAGGGAAAGAGGGCGAGGTGCCGAGG
GAGGGAGGGGTTGAGGGTGAGGGGTCCGACGAGGGGTATGCGGACATGGC
TTCGTATGAAGAGGCCGGACTAGGTGGACAGGAAGGAGGGGAGGAAGGGA
GGGAGGGAGGGGAGGACGTGGCGATGTTACCGTCGGAGAGCTTACCGTAC
ATGAAGACGGAGGAGCCGCAGGCGTCGCTGGTCGCTTCAAGGTCTTACGA
TATATCCATCACTTACGACAAGTACTACCAGACACCGCGGGCCTGGCTTT
TGGGCTATGACGAGATGTCGCAAAAAATGACGAGCTTTCTCAAAGGTGTT
CGGGAATACGTCTACCCTGTGCTAGACAAATCTGCCTTTTTAGAGCG back to top
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