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Properties
| Property Name | Value |
|---|
| TranscriptId | 574654 |
| Track | FilteredModels2 |
| ProteinId | 574568 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_2 | supercontig | scaffold_2:699100..702141 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_902 ID=mRNA_902|Name=jgi.p|Nanoce1779_2|574568|organism=Nannochloropsis oceanica|type=mRNA|length=3042bp
AGACAGAGATGGGACTCTCCGTGAAGTCCATCATGAGACGCGCCCGGCGC
TGCATGCCTGTGGCGTTGCTGTACCTGGTGATGAGCCAGGAGGCCCTGGC
CTTGCGCCAAAACATCCAGAACACCAAGGCCTTCATTGGGAGCGCCCGGC
TATCCCGGTCCACCGAGACAACCCGTCGCAGCACCAGCAGCAACACCTTT
GGGGCTCGCGCTGTGAGCATGAAGGAGGCCCCGAACTTCGGCAATGTCTG
CCCTAGCAAGGCCACCCTCCTGGGTGTGACTGCGCTTGGCCTCTCTGGTG
CCATGGGACCTCAAGTTGCGCAGGCCGCAGACGCTGCCCCTGTGCTCCAG
ACGATGAACCGCCAACCGGGTGTACCTTCTTTGGTGCGCTACAGTGACTT
TTTGGATATGGTGGAGAAGGGCCAGATCGAGAAAGTCACGTTCTCTGCTG
ACGGGCAAAAGCTCGTCGCCACCGACACGGACGGCGCTCGCTATCGCCTG
GATGCACTTCCTAACGATCCTGATCTCCTGGCCACCCTTACCCAAAAGAT
GGTCGACGTGACTGTGCTGCCAGAGCAGGCGAAGGCAGAGGGCTTCAACT
TCTTCCAGTCCATCCTCTTCCCGGGTCTCCTCTTTCTGGGCCTCTTCTTC
CTGGCCCGTCGCGGCGGCTCAGGCGCTGGTGGGGGCGCTGGTCCTGGCGG
CATGCCCGGAATGGGTGGACAGGGCCCGATGGAATTCTCTAAGTCGTCGG
CCAAGATTATGTTGACCCCCGACACGGGCGTGACGTTCGATAATGTGGCC
GGTTGTGATGGCGCCAAGATGGAGCTGACGGAGGTGGTTGACTTTTTGAA
GAACCCGGAGAAGTACACCAACGTCGGTGCCAAGATCCCCCGCGGTGTGA
TCCTTGATGGTCCTCCCGGTACAGGGAAGACGCTGCTGGCCAAGGCCGTG
GCGGGTGAGTCTGGCGTGCCCTTCATATCGGCGGCTGGGTCCGAATTCGT
GGAAATGTTTGTGGGTGTGGGTGCGTCGCGTGTGCGTGACATGTTTGAGC
AGGCTAAGAAGAACGCGCCTTGCATCATTTTCATCGACGAGATTGACGCT
GTGGGTCGCCAGCGTGGTGCTGGTTTTGCCGGCGGGAACGACGAGCGTGA
GCAAACCTTAAATCAGCTTCTGACTGAGATGGACGGCTTCGAGGGCAACC
CCGGCATCATCGTCATCGCCGCCACCAACAGAGCCGACGTCCTGGATCAG
GCTCTCCTGCGTCCTGGTCGATTCGATCGCCGCGTGACCGTAGACCTGCC
CGACTTCAAAGGCCGCACGGCCATCCTCAAGGTGCACTCTAAGGGGAAGC
CCCTCGCCCCCGACGTCGACCTCGAGTCCATTTCCCGCCGTACCCCCGGC
TTCTCTGGTGCCTCTCTTCAAAACATCATGAATGAAGCGGCCATCTCTGC
TGCACGTGCCGACAAGCCCGATGTCGGATGGGAGGAGATTGACAATGCCG
TCGATCGTGTCCTGGTCGGTCTGGAGAAGCGCGGGGCCGATGTGCCCGCT
CTGCGCAAGGAGCTCGTGGCGTTCCATGAGGCTGGCCATGCTATCGTGGG
CGCAGTGATCCCCGACTACGACATGGTGCAGAAGGTTACCATCATCCCTC
GCTCCAACGGCGCCGGTGGTCTGACCTTCTTTGCCCCCAACGAGGACCGG
CTGGAGAGCAGCATGTACACGCGCCAATATCTGGAGGCGCAGCTGGCCGT
GGCGCTTGGCGGACGTTTGGCGGAGGAGTTGATTTTTGGCCCCGATCATG
TGACGACGGGTGCGATGAACGACATCCAGCAGGTGGCGAACATTGCCAAG
CGCATGGTGACACAGTTCGGTATGTCCGACACCGTGGGGCCTCTGGGCAT
TGGAGAGAGCGGACCTGTGTTCATGGGCCGACGTATGGCGGAGGGCGTGA
CGGAGTGGTCGCAGTCATTGAAGAAGGAGGTGGACGACGAGGTGGAGCGG
CTTGTGTCCAACGCATATAACCTGGCCAAGGACGTGTTGCAGAAGAACAT
GGACTTGCTCTACGGCCTGGCTGACCGGTTGGTGGAACAGGAGACCGTCA
CGGCCGAGGAGTTCGCCTTCATGCTGCTTGAGTACCAGGTGCAGATGGTG
CCCTACGCTGTGTACCCCAACGAGAGCAAGATGGGCGACTTGCCCTACTA
CCCCGACCAGATGCCCGACTGGAAGTCTGGGACCAACATGCGCTTCTCCC
GTGAGGTCAAGGGCCGCATGGACCGTCGGGCAGATGAGGTGATGGGATCA
TCGCGTTTGATTGGCGCCGGTGGCGGAAGCGGTGCTTCAAAGGTGCCCGC
TGCTCCTGCTCTTTCCTGAGGCCCCCGCAGAGTAAAACGCTTGGGTAGGG
TAGAGCCCATTTTTTTTTCATGTGCGTTTTGTCAAGTACAGAAGCGATAG
CGAGCGAGATGAAGATGTCAGTCATTTCTAAAGCCAACGATTTCTTTAAC
GTGATATTCAACCGCCTTTTGAGTTGAAGTTCGAGTAGTACGTGACATGC
ATGCGCCCACGCCGACAGTACGAGTATAAGCAAATAGCAGACAAAAACGA
GGTATGGAAGGAAGGAGGAAGAGCAGTGGAAGGAGGGATCAATAGTGAAC
AGGATGATGCCTCGAAGTCTTTGGTTGATGTATAGAGAGAACAAAAGAGC
GCAAGAGGGAGGTTTGTGATGAGAGGAAGGTAGTGAAAGGAGTGCGCGCG
GCTCCCCTCCTGTGTATGGCTTTCAACACCCGCTGGTGCAGCGGCCTCTT
GCCTTTTTTTCTTCATTCATAAGCGTACAACCATTCCACGTTTGAATGGT
TGCATGAAGGCGGAAGAAGACGAGAGAGTCGCAGGCCATGCAAGTGGGGC
AAAATGGGTGCAATGAGGACCTCTGGAGGGTGTCGGGAAGAAGAACAAAC
GAGATAAGAGCTGATGGGACGCACGAAGAGTTCTTGTAACCTGACAAAAT
TTGGAAAAAGAATAGTCGTTCGTTTGTTTGTTTTCCCATCTG back to topprotein sequence of jgi.p|Nanoce1779_2|574568 >mRNA_902-protein ID=mRNA_902-protein|Name=jgi.p|Nanoce1779_2|574568|organism=Nannochloropsis oceanica|type=polypeptide|length=787bp
MGLSVKSIMRRARRCMPVALLYLVMSQEALALRQNIQNTKAFIGSARLSR
STETTRRSTSSNTFGARAVSMKEAPNFGNVCPSKATLLGVTALGLSGAMG
PQVAQAADAAPVLQTMNRQPGVPSLVRYSDFLDMVEKGQIEKVTFSADGQ
KLVATDTDGARYRLDALPNDPDLLATLTQKMVDVTVLPEQAKAEGFNFFQ
SILFPGLLFLGLFFLARRGGSGAGGGAGPGGMPGMGGQGPMEFSKSSAKI
MLTPDTGVTFDNVAGCDGAKMELTEVVDFLKNPEKYTNVGAKIPRGVILD
GPPGTGKTLLAKAVAGESGVPFISAAGSEFVEMFVGVGASRVRDMFEQAK
KNAPCIIFIDEIDAVGRQRGAGFAGGNDEREQTLNQLLTEMDGFEGNPGI
IVIAATNRADVLDQALLRPGRFDRRVTVDLPDFKGRTAILKVHSKGKPLA
PDVDLESISRRTPGFSGASLQNIMNEAAISAARADKPDVGWEEIDNAVDR
VLVGLEKRGADVPALRKELVAFHEAGHAIVGAVIPDYDMVQKVTIIPRSN
GAGGLTFFAPNEDRLESSMYTRQYLEAQLAVALGGRLAEELIFGPDHVTT
GAMNDIQQVANIAKRMVTQFGMSDTVGPLGIGESGPVFMGRRMAEGVTEW
SQSLKKEVDDEVERLVSNAYNLAKDVLQKNMDLLYGLADRLVEQETVTAE
EFAFMLLEYQVQMVPYAVYPNESKMGDLPYYPDQMPDWKSGTNMRFSREV
KGRMDRRADEVMGSSRLIGAGGGSGASKVPAAPALS* back to topmRNA from alignment at scaffold_2:699100..702141- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_902 ID=mRNA_902|Name=jgi.p|Nanoce1779_2|574568|organism=Nannochloropsis oceanica|type=mRNA|length=3042bp|location=Sequence derived from alignment at scaffold_2:699100..702141- (Nannochloropsis oceanica)
AGACAGAGATGGGACTCTCCGTGAAGTCCATCATGAGACGCGCCCGGCGC
TGCATGCCTGTGGCGTTGCTGTACCTGGTGATGAGCCAGGAGGCCCTGGC
CTTGCGCCAAAACATCCAGAACACCAAGGCCTTCATTGGGAGCGCCCGGC
TATCCCGGTCCACCGAGACAACCCGTCGCAGCACCAGCAGCAACACCTTT
GGGGCTCGCGCTGTGAGCATGAAGGAGGCCCCGAACTTCGGCAATGTCTG
CCCTAGCAAGGCCACCCTCCTGGGTGTGACTGCGCTTGGCCTCTCTGGTG
CCATGGGACCTCAAGTTGCGCAGGCCGCAGACGCTGCCCCTGTGCTCCAG
ACGATGAACCGCCAACCGGGTGTACCTTCTTTGGTGCGCTACAGTGACTT
TTTGGATATGGTGGAGAAGGGCCAGATCGAGAAAGTCACGTTCTCTGCTG
ACGGGCAAAAGCTCGTCGCCACCGACACGGACGGCGCTCGCTATCGCCTG
GATGCACTTCCTAACGATCCTGATCTCCTGGCCACCCTTACCCAAAAGAT
GGTCGACGTGACTGTGCTGCCAGAGCAGGCGAAGGCAGAGGGCTTCAACT
TCTTCCAGTCCATCCTCTTCCCGGGTCTCCTCTTTCTGGGCCTCTTCTTC
CTGGCCCGTCGCGGCGGCTCAGGCGCTGGTGGGGGCGCTGGTCCTGGCGG
CATGCCCGGAATGGGTGGACAGGGCCCGATGGAATTCTCTAAGTCGTCGG
CCAAGATTATGTTGACCCCCGACACGGGCGTGACGTTCGATAATGTGGCC
GGTTGTGATGGCGCCAAGATGGAGCTGACGGAGGTGGTTGACTTTTTGAA
GAACCCGGAGAAGTACACCAACGTCGGTGCCAAGATCCCCCGCGGTGTGA
TCCTTGATGGTCCTCCCGGTACAGGGAAGACGCTGCTGGCCAAGGCCGTG
GCGGGTGAGTCTGGCGTGCCCTTCATATCGGCGGCTGGGTCCGAATTCGT
GGAAATGTTTGTGGGTGTGGGTGCGTCGCGTGTGCGTGACATGTTTGAGC
AGGCTAAGAAGAACGCGCCTTGCATCATTTTCATCGACGAGATTGACGCT
GTGGGTCGCCAGCGTGGTGCTGGTTTTGCCGGCGGGAACGACGAGCGTGA
GCAAACCTTAAATCAGCTTCTGACTGAGATGGACGGCTTCGAGGGCAACC
CCGGCATCATCGTCATCGCCGCCACCAACAGAGCCGACGTCCTGGATCAG
GCTCTCCTGCGTCCTGGTCGATTCGATCGCCGCGTGACCGTAGACCTGCC
CGACTTCAAAGGCCGCACGGCCATCCTCAAGGTGCACTCTAAGGGGAAGC
CCCTCGCCCCCGACGTCGACCTCGAGTCCATTTCCCGCCGTACCCCCGGC
TTCTCTGGTGCCTCTCTTCAAAACATCATGAATGAAGCGGCCATCTCTGC
TGCACGTGCCGACAAGCCCGATGTCGGATGGGAGGAGATTGACAATGCCG
TCGATCGTGTCCTGGTCGGTCTGGAGAAGCGCGGGGCCGATGTGCCCGCT
CTGCGCAAGGAGCTCGTGGCGTTCCATGAGGCTGGCCATGCTATCGTGGG
CGCAGTGATCCCCGACTACGACATGGTGCAGAAGGTTACCATCATCCCTC
GCTCCAACGGCGCCGGTGGTCTGACCTTCTTTGCCCCCAACGAGGACCGG
CTGGAGAGCAGCATGTACACGCGCCAATATCTGGAGGCGCAGCTGGCCGT
GGCGCTTGGCGGACGTTTGGCGGAGGAGTTGATTTTTGGCCCCGATCATG
TGACGACGGGTGCGATGAACGACATCCAGCAGGTGGCGAACATTGCCAAG
CGCATGGTGACACAGTTCGGTATGTCCGACACCGTGGGGCCTCTGGGCAT
TGGAGAGAGCGGACCTGTGTTCATGGGCCGACGTATGGCGGAGGGCGTGA
CGGAGTGGTCGCAGTCATTGAAGAAGGAGGTGGACGACGAGGTGGAGCGG
CTTGTGTCCAACGCATATAACCTGGCCAAGGACGTGTTGCAGAAGAACAT
GGACTTGCTCTACGGCCTGGCTGACCGGTTGGTGGAACAGGAGACCGTCA
CGGCCGAGGAGTTCGCCTTCATGCTGCTTGAGTACCAGGTGCAGATGGTG
CCCTACGCTGTGTACCCCAACGAGAGCAAGATGGGCGACTTGCCCTACTA
CCCCGACCAGATGCCCGACTGGAAGTCTGGGACCAACATGCGCTTCTCCC
GTGAGGTCAAGGGCCGCATGGACCGTCGGGCAGATGAGGTGATGGGATCA
TCGCGTTTGATTGGCGCCGGTGGCGGAAGCGGTGCTTCAAAGGTGCCCGC
TGCTCCTGCTCTTTCCTGAGGCCCCCGCAGAGTAAAACGCTTGGGTAGGG
TAGAGCCCATTTTTTTTTCATGTGCGTTTTGTCAAGTACAGAAGCGATAG
CGAGCGAGATGAAGATGTCAGTCATTTCTAAAGCCAACGATTTCTTTAAC
GTGATATTCAACCGCCTTTTGAGTTGAAGTTCGAGTAGTACGTGACATGC
ATGCGCCCACGCCGACAGTACGAGTATAAGCAAATAGCAGACAAAAACGA
GGTATGGAAGGAAGGAGGAAGAGCAGTGGAAGGAGGGATCAATAGTGAAC
AGGATGATGCCTCGAAGTCTTTGGTTGATGTATAGAGAGAACAAAAGAGC
GCAAGAGGGAGGTTTGTGATGAGAGGAAGGTAGTGAAAGGAGTGCGCGCG
GCTCCCCTCCTGTGTATGGCTTTCAACACCCGCTGGTGCAGCGGCCTCTT
GCCTTTTTTTCTTCATTCATAAGCGTACAACCATTCCACGTTTGAATGGT
TGCATGAAGGCGGAAGAAGACGAGAGAGTCGCAGGCCATGCAAGTGGGGC
AAAATGGGTGCAATGAGGACCTCTGGAGGGTGTCGGGAAGAAGAACAAAC
GAGATAAGAGCTGATGGGACGCACGAAGAGTTCTTGTAACCTGACAAAAT
TTGGAAAAAGAATAGTCGTTCGTTTGTTTGTTTTCCCATCTG back to topCoding sequence (CDS) from alignment at scaffold_2:699100..702141- >mRNA_902 ID=mRNA_902|Name=jgi.p|Nanoce1779_2|574568|organism=Nannochloropsis oceanica|type=CDS|length=2361bp|location=Sequence derived from alignment at scaffold_2:699100..702141- (Nannochloropsis oceanica)
ATGGGACTCTCCGTGAAGTCCATCATGAGACGCGCCCGGCGCTGCATGCC
TGTGGCGTTGCTGTACCTGGTGATGAGCCAGGAGGCCCTGGCCTTGCGCC
AAAACATCCAGAACACCAAGGCCTTCATTGGGAGCGCCCGGCTATCCCGG
TCCACCGAGACAACCCGTCGCAGCACCAGCAGCAACACCTTTGGGGCTCG
CGCTGTGAGCATGAAGGAGGCCCCGAACTTCGGCAATGTCTGCCCTAGCA
AGGCCACCCTCCTGGGTGTGACTGCGCTTGGCCTCTCTGGTGCCATGGGA
CCTCAAGTTGCGCAGGCCGCAGACGCTGCCCCTGTGCTCCAGACGATGAA
CCGCCAACCGGGTGTACCTTCTTTGGTGCGCTACAGTGACTTTTTGGATA
TGGTGGAGAAGGGCCAGATCGAGAAAGTCACGTTCTCTGCTGACGGGCAA
AAGCTCGTCGCCACCGACACGGACGGCGCTCGCTATCGCCTGGATGCACT
TCCTAACGATCCTGATCTCCTGGCCACCCTTACCCAAAAGATGGTCGACG
TGACTGTGCTGCCAGAGCAGGCGAAGGCAGAGGGCTTCAACTTCTTCCAG
TCCATCCTCTTCCCGGGTCTCCTCTTTCTGGGCCTCTTCTTCCTGGCCCG
TCGCGGCGGCTCAGGCGCTGGTGGGGGCGCTGGTCCTGGCGGCATGCCCG
GAATGGGTGGACAGGGCCCGATGGAATTCTCTAAGTCGTCGGCCAAGATT
ATGTTGACCCCCGACACGGGCGTGACGTTCGATAATGTGGCCGGTTGTGA
TGGCGCCAAGATGGAGCTGACGGAGGTGGTTGACTTTTTGAAGAACCCGG
AGAAGTACACCAACGTCGGTGCCAAGATCCCCCGCGGTGTGATCCTTGAT
GGTCCTCCCGGTACAGGGAAGACGCTGCTGGCCAAGGCCGTGGCGGGTGA
GTCTGGCGTGCCCTTCATATCGGCGGCTGGGTCCGAATTCGTGGAAATGT
TTGTGGGTGTGGGTGCGTCGCGTGTGCGTGACATGTTTGAGCAGGCTAAG
AAGAACGCGCCTTGCATCATTTTCATCGACGAGATTGACGCTGTGGGTCG
CCAGCGTGGTGCTGGTTTTGCCGGCGGGAACGACGAGCGTGAGCAAACCT
TAAATCAGCTTCTGACTGAGATGGACGGCTTCGAGGGCAACCCCGGCATC
ATCGTCATCGCCGCCACCAACAGAGCCGACGTCCTGGATCAGGCTCTCCT
GCGTCCTGGTCGATTCGATCGCCGCGTGACCGTAGACCTGCCCGACTTCA
AAGGCCGCACGGCCATCCTCAAGGTGCACTCTAAGGGGAAGCCCCTCGCC
CCCGACGTCGACCTCGAGTCCATTTCCCGCCGTACCCCCGGCTTCTCTGG
TGCCTCTCTTCAAAACATCATGAATGAAGCGGCCATCTCTGCTGCACGTG
CCGACAAGCCCGATGTCGGATGGGAGGAGATTGACAATGCCGTCGATCGT
GTCCTGGTCGGTCTGGAGAAGCGCGGGGCCGATGTGCCCGCTCTGCGCAA
GGAGCTCGTGGCGTTCCATGAGGCTGGCCATGCTATCGTGGGCGCAGTGA
TCCCCGACTACGACATGGTGCAGAAGGTTACCATCATCCCTCGCTCCAAC
GGCGCCGGTGGTCTGACCTTCTTTGCCCCCAACGAGGACCGGCTGGAGAG
CAGCATGTACACGCGCCAATATCTGGAGGCGCAGCTGGCCGTGGCGCTTG
GCGGACGTTTGGCGGAGGAGTTGATTTTTGGCCCCGATCATGTGACGACG
GGTGCGATGAACGACATCCAGCAGGTGGCGAACATTGCCAAGCGCATGGT
GACACAGTTCGGTATGTCCGACACCGTGGGGCCTCTGGGCATTGGAGAGA
GCGGACCTGTGTTCATGGGCCGACGTATGGCGGAGGGCGTGACGGAGTGG
TCGCAGTCATTGAAGAAGGAGGTGGACGACGAGGTGGAGCGGCTTGTGTC
CAACGCATATAACCTGGCCAAGGACGTGTTGCAGAAGAACATGGACTTGC
TCTACGGCCTGGCTGACCGGTTGGTGGAACAGGAGACCGTCACGGCCGAG
GAGTTCGCCTTCATGCTGCTTGAGTACCAGGTGCAGATGGTGCCCTACGC
TGTGTACCCCAACGAGAGCAAGATGGGCGACTTGCCCTACTACCCCGACC
AGATGCCCGACTGGAAGTCTGGGACCAACATGCGCTTCTCCCGTGAGGTC
AAGGGCCGCATGGACCGTCGGGCAGATGAGGTGATGGGATCATCGCGTTT
GATTGGCGCCGGTGGCGGAAGCGGTGCTTCAAAGGTGCCCGCTGCTCCTG
CTCTTTCCTGA back to top
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