jgi.p|Nanoce1779_2|574568, gene_902 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|574568
Unique Namegene_902
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_2:699100..702141 -

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Properties
Property NameValue
TranscriptId574654
ProteinId574568
Product namePeptidase family M41-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_2supercontigscaffold_2:699100..702141 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0030163protein catabolic process
GO:0006508proteolysis
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0017111nucleoside-triphosphatase activity
GO:0004222metalloendopeptidase activity
GO:0005524ATP binding
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL032ncniL032Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G03120NO02G03120Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|574568mRNA_902-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|574568mRNA_902Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|574568

>mRNA_902-protein ID=mRNA_902-protein|Name=jgi.p|Nanoce1779_2|574568|organism=Nannochloropsis oceanica|type=polypeptide|length=787bp
MGLSVKSIMRRARRCMPVALLYLVMSQEALALRQNIQNTKAFIGSARLSR
STETTRRSTSSNTFGARAVSMKEAPNFGNVCPSKATLLGVTALGLSGAMG
PQVAQAADAAPVLQTMNRQPGVPSLVRYSDFLDMVEKGQIEKVTFSADGQ
KLVATDTDGARYRLDALPNDPDLLATLTQKMVDVTVLPEQAKAEGFNFFQ
SILFPGLLFLGLFFLARRGGSGAGGGAGPGGMPGMGGQGPMEFSKSSAKI
MLTPDTGVTFDNVAGCDGAKMELTEVVDFLKNPEKYTNVGAKIPRGVILD
GPPGTGKTLLAKAVAGESGVPFISAAGSEFVEMFVGVGASRVRDMFEQAK
KNAPCIIFIDEIDAVGRQRGAGFAGGNDEREQTLNQLLTEMDGFEGNPGI
IVIAATNRADVLDQALLRPGRFDRRVTVDLPDFKGRTAILKVHSKGKPLA
PDVDLESISRRTPGFSGASLQNIMNEAAISAARADKPDVGWEEIDNAVDR
VLVGLEKRGADVPALRKELVAFHEAGHAIVGAVIPDYDMVQKVTIIPRSN
GAGGLTFFAPNEDRLESSMYTRQYLEAQLAVALGGRLAEELIFGPDHVTT
GAMNDIQQVANIAKRMVTQFGMSDTVGPLGIGESGPVFMGRRMAEGVTEW
SQSLKKEVDDEVERLVSNAYNLAKDVLQKNMDLLYGLADRLVEQETVTAE
EFAFMLLEYQVQMVPYAVYPNESKMGDLPYYPDQMPDWKSGTNMRFSREV
KGRMDRRADEVMGSSRLIGAGGGSGASKVPAAPALS*
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Synonyms
Publications