jgi.p|Nanoce1779_2|673322, mRNA_8422 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|673322
Unique Name	mRNA_8422
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	7163
Alignment location	scaffold_24:224360..231522 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	673408
Track	FilteredModels2
ProteinId	673322

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_24	supercontig	scaffold_24:224360..231522 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|673322	gene_8422	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|673322	mRNA_8422-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_8422	CDS_8422	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_24:224360..231522+
coding sequence from alignment at scaffold_24:224360..231522+

mRNA sequence

>mRNA_8422 ID=mRNA_8422|Name=jgi.p|Nanoce1779_2|673322|organism=Nannochloropsis oceanica|type=mRNA|length=7163bp
ATGTCGATGAGCAACAGCAAAAGCGCTGCCACAACGCAGCTGTCGTCCTC
ACCACCCTCCTCCTCACCGATGCAAGGGCAGCAACAGCAACAGCAGCAGC
AACAACAACAAACCCCCTCAGCTCCCCCGTCAGCCCAAGTGCCCTCCGGC
ACCGGAGGAGGGATGAGCGGCGTGGCCAGCACCGCCATGAGCAGCAACAA
TAGCACTGCCTCCCATCTCTCCACGACCCCTCCCACGGATTCATCGCTCA
CCCCTTTCACACCCGGCGGCGGTGGCGGAGGGGGAGGAGGGATAAGCCAC
ATGTCTTCCACAGGCACACTGGGCATTACCATGGCTGGCGAAGGGTCTTT
ATCGGCGTCGGCAGAGGGCCGGGACCCCGGCGAGGAGCTACGGAAGCAGA
TCATTGAGTACTCGCCGCAGAAGCGGTACGTGAAATTCAACGAGGTGCTG
GGGAAGGGGGCGTACAAGATGGTTTACCGGGCATACGACACCAAAGAGGG
CCTGCTGGTGGCCTGGAACACCATCAGCCTGGCGGGACTGCCGAAGCAGG
AGAAGATCCGGATCATGCACGAGGTGAGACTGTTGGAGCAGCTGGATCAC
GGCAACATCATCTCCTTCTTCGGCTCGTGGGTGAATCGGGAGAGGGAAGA
GGTGGTTTTCATCACGGAGATTCTCTCGTCGGGCTCCCTGAAGGACTTCA
TTAGGAAAGTGCAAGTCATCCGCTGGAAGATCATAAAGCGCTGGTGCCGT
CAAATCCTCCGCGGCCTGCTCTACCTCCACTCCCACGTGCCCCCCATCAT
CCACCGGGACCTCAAGTGCGACAACATCTTCATCAACGGCTCCTCGGGCG
ACCTGCGGATCGGGGACCTCGGCCTCTCCACCTACATCACCGGCCGCACG
GCCCCCTTGTCGGTACTGGGCACGCCCGAGTTTATGGCACCGGAGCTGTA
CGACGAGAAGTATGACGAGAAGGTAGATGTTTATGCATTCGGGATGTGTG
TGCTGGAGATGGTGACCAAAGAGACGCCCTACTCGGAGTGTGCGAATGCC
GCGCAGATCTATAAGAAGGTCATCGGGCAGGTCCCGCCTCAGGTCTTGTT
TCGTGTGCGGAATCTCCGGGCGCGAGACTTCATTCGTGGCTGTTTGGCCT
CGGACCCGGCCCAGAGACCGACGGTGGAGGGGCTGCTGGAGAGCTCGTTT
CTGAAGCAGCAGGAGGAGGACGACGAGGAGGTGCTGGTGGACTCTGTAGC
TTCTTGCTCCTCGCTCGCCCCTCCGTACCAGGGGGATATGATGCGCGTAA
ACACCCTTTTACAACTACAACTACAACAACAGCAGCCACAGCAACAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGAAGGAGGAGGAGGAGGGTCAGCTGGA
CATGGGGGTGGTGGGCAGCAACCCTGGTGGGCAGCGCAACGGTGTCGTCG
GCCAGCAGGAGCAGCAGCAGCAAAAGCAGAAGCAGCAGCAGCAGCAGCAG
CAGCAGCACAAGATGGGAACATCGGCCAAGCCAGGCATGGAGGCAGCACC
TTCATCCTCCTCTTCTGATTCTGGCGGCTCTTGCGGCAGTGATGGTGACC
CTGCTGAGCTTCGCCATGACCAGTTCCTCCAACATCAACATCACCATCAC
AACCTTAACGGGCACCACGCCGACGGAGGAGAAGGAGGAGGAGAAGGAGG
AGGAGGAGGAGGAGGAGGGGGAGGGAGAAGAGGAGGAGGAGGTGGAGGTG
GGAGACTTGGTCCCTCTCCTCACCTTCCTGAACGCACCCTCTCTCCTCAC
TCTCTTGCCACCTCGGCGACCTCAGACGGCTCCTCCCTCCACCACTATTA
CGACATCCCCCCCACCCCCGCCCTCTCCCACAGTGGCTCTGAAGAAACTC
TAGAGAAATACAATACCTCCTCGCCCGTCCTCGAGGGCCACTTTGGCAGC
TCGGTGCTCCTGGAAGGGTCTGTCGCCCTCCCCGCCCCACCCAGTGCTCT
GCTTGAGGCGGCGCAGCACCAGCATGCACAGCACGGGGGACAGCAGCAGC
ACCATCATCACTCCGACCATCACCACCAACAGCATCTGCGAAATAAGGAT
GGGAAGCCCCTGACGCGTGCCTCGTCCTTCCCTCACCACGGCCACGGCGC
CGACCGCCCCCCGCGCCATGCTGCTTCTCCCATGAGTCAAGCCACCGGGG
CTGGGCCCCGTGGCAGTCACTCCTTACACCATAATCACTCCCTACACCAT
AATCAAGACCACGAAAGCTGGGCCTTGCTGCACGTTAGCGACGACAATGA
GACATCCGGTCCTCCCTCGTCCTCTTCCTCCTCAGCCCGAGGTGGCTTTC
GTCTTGGCAGCAGCATCCTCTCCCGTCGAGGCGGCGCAAGTGGCGGGGGC
GCAGGAACAGCAGGGTTTAAGAGCGGCGCGCCCATCTCTTCCTCCGCGGA
AAGCACCAGCCATCCCTCCCGTCGCCCCTACCAACACATACATCACATCA
AGATCAGCGGTTCGCAGCAGCAGCTACACCAGCAGCAGCAGTCCTCTGCA
CCCTCGACCCCCACGGCCGTCCCCACGGTGCAAGTCCGCGTCGGGGCCGA
CGCCGGCACGGGTGGCTCTGCACGGGACGTGTTGTGTCTGGTGATTCGTG
CCAAGATAAAGGGCAAGCTGAGGGACATCGAATTCGACTTCCACCTCACC
GACGACGACGCCACCCAGGTCGCGCACGAGATGGTCCAAGAGCTCTCCCT
CCCTCCCTCTGATCTCGGCCCCGTAGCTAGCACCATCCGTCGCTTGGCTG
ACGAGTCGCGGCGGGCGTGGGACGAGAACAAGCGGCCACAGCTGCAGCCC
CAGATTCCTCCACATAAGGGGGATCTGCAACGGTCTACGTCCATGGAGGG
GCCGCCGAATAAAGGCGAAGGAGAAGGGAGGGATGGAGGAGTGGTAGGGC
TGCAGCAGCAATACCAAGAGCAGCAGGAGCAGCAGGGAGCAGGGGTAGGA
CGGTCAGTGTTGCCTCGGTCCCTGTCCACCAACAACATGGCCCATCTGGC
TGCGTTGCGAGCGGGTGGGCTCCAACCCGACTTCTCCCTGGACCCCCATC
ACCTCCATCCCCGCCATCAGCTTCACCACCAGACCGGGCAGCCGCCCCAT
ATCCGCACGCACTCTGCCGACATGCAGCAGCAGCAGCAGCATAGAGGCCT
CCAGCAGCACCACCGGAATCGCAGTGACTTGAGTAGCGACGGGTGCTGGA
GTGGTGGAGAGGGAGGGGGCGGGCAGCCGTTGACCTCATTGCCTCCGCAC
TTGCAGCACTACCACCACCCCTCCGACGACGACGTCAGTCGGGCAAGTCC
CGCGGCCTCTCTAGGGGATGACGGGGAGTTCCCTTCCTCCCTTCACTCCT
CCTCCCTCTCACACCACGTTTACGGGCCTGGCCCTGCTCACTCCTATCCG
CACTCGTACCTGCTCATGAGCTCTGACGACGACGACTCGGCGGGCGAGCG
GGAGTATGTGAAGGAAGATGATGAGGAGGACTGTGATGGGGAGATAACCC
GGTTGCGGGCCGACTACGAGAAGGGGCTCCAGCGGTCTCACAAGGCTTTT
TCGATCAGGGTGGAGAATCTGAAGAAGTCGCGGTTGGAGAAGGAGGAAAG
CCACAAGAAGCAGCTGGAGAAGCACCTGCGGGACATGGCGGATTTCGAGC
GGAAAGTGCGGACGGCGGAGAGGGAGCAGATCATGCGCTTGAAGGAGCTT
GAAGAAGAGTGGCGAGCCATCAAAACCGAACACAGGGAACGAAGGCGCCT
TGCCAAGCTGGCTGCTGAGGGAAAAGGAGGGAAGAGAGGCTCTGCCAGCA
GCATCCCCGCCATCGACAGCACAGCGGCGTCGGCATCGGCGGCCACGGGA
ATAAGAAGGCCGTCGTCGCCCTTCCAGCACACGCCCGGTCCCGGAGCGGA
CAGATAGCAGGGGCTATTCAGCTTAGAGGGCGGGGGAAGGGGAGTGAGGA
AAGCTGTGCAGTAGAGGGAAAGAAGAGAGTTTGAGAGAGGGAGAGTATGG
CCGGGAAGTGATAGGAGGGGTATTTAAAACGGAAGTCGAGCAATATGCGG
AGGGCCGACCCACCTTGTATGTAGAAAAGAATATCAGCACCCTCCTGCCG
ATAACTCCTCCTCCCTGGAATGTCATTACTCCTTTCACCCTTCCTTTTCT
TCAATTCCCTCCGTCAGACCATAGCCCTTGATGACGGTGCGTGTGTGCTC
GGCAGGAATAAGCGTGTGCGCCTGTACGTCTACGTCTTGCGGGAATGGCC
TGATATTGCAGCCAACAAGTGAAACATTGAACACCATAGAAAGAAAATCT
TGCATGACTTTGATCTTGAGTAGCAAGATGAGTGACATATTATGGCGCAT
TGATTTTCTGGCAGACGACCCTCTAAACTTTTTACTTTTGCTTGGGTCAT
ACACTTCCTCCGTCGATATTTTTATATCTCGAAGCTCCGCACTACGCCGT
CTGCCCCTCCCGTAAACAAAGGCCATGCCGCCCCCTCCTCCCCGCCAGTC
CTCCACCCAAAACATGAAGCCAAAGCCTTCCCTTCGTGCGCCGTCAGTGT
GTGCAGCGGCTTGGTCGCCCTCAAGTCCCACACGCGCAAAAGCCCGTCGT
GGGTAAGCGCGGCAAGCACATTCTCTCGACGCGGATGCCAGGCAACCCCC
GATATCCACGAACCACAACCAGCCAGCACGCGCTTTCCCGGCGTGGCCGA
TGTCCCTTCCACTCCGTTGTCTGTTGAGGAAGAACGGAGATCCCACACCC
GCAAGCGTCCGTCGGGGTGGCCCGCCGCCACAAGACTACCGGCCGAAGCG
GCAAGCGACGTAACAACCCTGCTGCTGTTGAGTGTCTGCACGCAGTCTTG
TCGCTCCAGATCCCAGGACTTGATGGAGTGATCCCAGGAGGAGGTGAAGA
CCCTGGACACATCGGCCTGGTGCCACTCAATGCCGCTCATGCACTGGCTG
TGGGCCTTCAAAACAGACACGGGCGTCAGGGTGCTGGCGACTGCTTGTAC
TGCTGCCGCCTCCTCCCCGACCTGAACGTCATACATTCTGCGTTTCTTCC
TTTTTTGAGAAGTGATTGTAGAAGAAGAGAAGGCAGGGGTAGAAAACGTT
TCGCCCCCTCCCTCAAGCTTCCAGAAGCACATCATCCCGCTCCAATCACC
CGTGAGCACCTGCTGCTGCTTTCCCCGCACCGCCACGCACTCTACGCTGT
TCTCGTGGCCCATTAAAACGCTCACAGGCCACATCACTATCCCTGCGGCC
GCTGCGATTTCCGTACTCTTCTTCTTGCGGTTGCTGGTTCCCGCCGCCGC
TGCCGACAGCCCCCAGGTCTTGACTAGCTTGTCCTTTCCAGCTGTCACCA
CCACGCTGCCCTTTCCCCCATCGTCTGTATCTAAATGAAAAGCTGCTACG
GCCTTTACCGGCCCAGTGTGAGCTTGGGACCACTCCCCCACACTCTGGCT
GCAATCCTGCGCGGCGTAACACCGCAACTTCCCGTCATACCCTCCTGCCA
CCACTACACCTCCCTCCCTGCCTCCCTGGCAAGCCACTAGACTACCCACC
CAGGCATCCTCGGGCTTGCTGCGAGTGCCCTCAATCGGCGCCTGCAGCGT
TCGGTAGTACTCCACATTTATTGTCACCTCTGTCGACAGCCCCGTGGCCC
GCAAAAACTTGTCCAGGGAGCAGCGCAACAGCTGGTTCTCTATCACAAAG
TCGTATCCACTTGCATTCGTTGTGTTGCCATCTTTTTCCTCCTCCTCTGC
TGATCCTTTGGTCCCACCCTCTATCCCAAGCAAGTGGTTTATAACTTCGG
AAAGCCCGCGGCGATTGAGAGCGACCGGCACGGCCAAGGGCACCTCGTTG
ACACGGATGGTGGGGTCGCGGGTGATGAAGCGGAGACGCACGCGGACATC
GGCGGCGGTGCTGCCACTGGTTTCGTTCATCCTCCTTTGCCTGAAAGGTA
GCAAACGCCCCCGAAAAAGGGTGATAGAGTCAAGTTCAAGCGTAATTGTA
TGTCAGCACATTTCTACGGTCATTTTTGCAAGATGCCTAATTGAAGAGCT
GGAAAGAGGGACAGGACAACGAAATGAATATCACATACTATAATAACCAA
AAATTTCGAGACGGTGCTAGAAGTAATTGCGGTGATGTCTCTACGCATCA
CTAGGCTATCGTCCCACTTTCTCTATCCGACGTCAAACTATCAGGCACTC
CCACATTGAGGTAATCGAGGGGGACTGATTGGGTCGTCTGGGTTCTGAAT
GGGGGCAAGAGTGGAAGAAAGCGATTTGCAGCAGAGAAAGGGGACGAAGA
AGAGAAGGGTGCACATCACAGGGTGACAGAAAAGCATGCCAACCTTGCAC
GCATACATGAGTATGGAGCGAATGGCACAGTGTTGTGGTGGCCAGACCAG
AAAGGACCTTTCAAGTGGGATGAAATACAAATAAACTCGATGCACCACAT
CCACAAACAGACAGCCCAGACAAAACATCCAAACCAATTTTGCCCATTTC
CTGGCCACGATGCACTGCCTCGCGCAGCGAGTCACGCTTAGTACGCATAC
CTTCCGTCTAGGAGCCCCAGGATATTTCTCCTTGTGAGAGGTGATTACGA
TGCCGGAGTAGTTTGCCTGTTGTGCGTCTTTTTTGTCGGAGGAAATCGGG
GTGGTACATGGGTGAGTACGGATACGAGCAATCAGTCAGAAACATTGCGG
CGTGAGAGACAGCGCCGTAGCGGTCCATCCTTTCCAACCTCCTCTCCACC
CACTTACTATACTGTCCGTTGCGGTCAGCTGTTATATATGAAGCGACGCC
ACACCCCATTTTGTTGTCGCGACTAATGTCTTCAGTTTTCAGCTTCTAGT
TGGACAGCTGCAGGGAGTCAACTGAGCTTTACGGACTGCCCAAGTCTCTT
TCTGCTGGCTGCTGTCGTTTACTTGGCTTTTCTTGTCGATTGGAGCACCT
ATCAGGCAAACTTTCATCTCGTCGGTCAGCCCCCTGATTTTATCCACAAC
TCACGCACCCAATCTATATCTTTATTTGACCTAAGACAGAACTGGGATAT
CGAGGACACGATGTGACAGGCACGTCATGAATGCCGCCTCGGATGCAGGT
GACTGAGTAGCCC

protein sequence of jgi.p|Nanoce1779_2|673322

>mRNA_8422-protein ID=mRNA_8422-protein|Name=jgi.p|Nanoce1779_2|673322|organism=Nannochloropsis oceanica|type=polypeptide|length=1319bp
MSMSNSKSAATTQLSSSPPSSSPMQGQQQQQQQQQQQTPSAPPSAQVPSG
TGGGMSGVASTAMSSNNSTASHLSTTPPTDSSLTPFTPGGGGGGGGGISH
MSSTGTLGITMAGEGSLSASAEGRDPGEELRKQIIEYSPQKRYVKFNEVL
GKGAYKMVYRAYDTKEGLLVAWNTISLAGLPKQEKIRIMHEVRLLEQLDH
GNIISFFGSWVNREREEVVFITEILSSGSLKDFIRKVQVIRWKIIKRWCR
QILRGLLYLHSHVPPIIHRDLKCDNIFINGSSGDLRIGDLGLSTYITGRT
APLSVLGTPEFMAPELYDEKYDEKVDVYAFGMCVLEMVTKETPYSECANA
AQIYKKVIGQVPPQVLFRVRNLRARDFIRGCLASDPAQRPTVEGLLESSF
LKQQEEDDEEVLVDSVASCSSLAPPYQGDMMRVNTLLQLQLQQQQPQQQQ
QQQQQQQQKEEEEGQLDMGVVGSNPGGQRNGVVGQQEQQQQKQKQQQQQQ
QQHKMGTSAKPGMEAAPSSSSSDSGGSCGSDGDPAELRHDQFLQHQHHHH
NLNGHHADGGEGGGEGGGGGGGGGGRRGGGGGGGRLGPSPHLPERTLSPH
SLATSATSDGSSLHHYYDIPPTPALSHSGSEETLEKYNTSSPVLEGHFGS
SVLLEGSVALPAPPSALLEAAQHQHAQHGGQQQHHHHSDHHHQQHLRNKD
GKPLTRASSFPHHGHGADRPPRHAASPMSQATGAGPRGSHSLHHNHSLHH
NQDHESWALLHVSDDNETSGPPSSSSSSARGGFRLGSSILSRRGGASGGG
AGTAGFKSGAPISSSAESTSHPSRRPYQHIHHIKISGSQQQLHQQQQSSA
PSTPTAVPTVQVRVGADAGTGGSARDVLCLVIRAKIKGKLRDIEFDFHLT
DDDATQVAHEMVQELSLPPSDLGPVASTIRRLADESRRAWDENKRPQLQP
QIPPHKGDLQRSTSMEGPPNKGEGEGRDGGVVGLQQQYQEQQEQQGAGVG
RSVLPRSLSTNNMAHLAALRAGGLQPDFSLDPHHLHPRHQLHHQTGQPPH
IRTHSADMQQQQQHRGLQQHHRNRSDLSSDGCWSGGEGGGGQPLTSLPPH
LQHYHHPSDDDVSRASPAASLGDDGEFPSSLHSSSLSHHVYGPGPAHSYP
HSYLLMSSDDDDSAGEREYVKEDDEEDCDGEITRLRADYEKGLQRSHKAF
SIRVENLKKSRLEKEESHKKQLEKHLRDMADFERKVRTAEREQIMRLKEL
EEEWRAIKTEHRERRRLAKLAAEGKGGKRGSASSIPAIDSTAASASAATG
IRRPSSPFQHTPGPGADR*

mRNA from alignment at scaffold_24:224360..231522+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_8422 ID=mRNA_8422|Name=jgi.p|Nanoce1779_2|673322|organism=Nannochloropsis oceanica|type=mRNA|length=7163bp|location=Sequence derived from alignment at scaffold_24:224360..231522+ (Nannochloropsis oceanica)
ATGTCGATGAGCAACAGCAAAAGCGCTGCCACAACGCAGCTGTCGTCCTC
ACCACCCTCCTCCTCACCGATGCAAGGGCAGCAACAGCAACAGCAGCAGC
AACAACAACAAACCCCCTCAGCTCCCCCGTCAGCCCAAGTGCCCTCCGGC
ACCGGAGGAGGGATGAGCGGCGTGGCCAGCACCGCCATGAGCAGCAACAA
TAGCACTGCCTCCCATCTCTCCACGACCCCTCCCACGGATTCATCGCTCA
CCCCTTTCACACCCGGCGGCGGTGGCGGAGGGGGAGGAGGGATAAGCCAC
ATGTCTTCCACAGGCACACTGGGCATTACCATGGCTGGCGAAGGGTCTTT
ATCGGCGTCGGCAGAGGGCCGGGACCCCGGCGAGGAGCTACGGAAGCAGA
TCATTGAGTACTCGCCGCAGAAGCGGTACGTGAAATTCAACGAGGTGCTG
GGGAAGGGGGCGTACAAGATGGTTTACCGGGCATACGACACCAAAGAGGG
CCTGCTGGTGGCCTGGAACACCATCAGCCTGGCGGGACTGCCGAAGCAGG
AGAAGATCCGGATCATGCACGAGGTGAGACTGTTGGAGCAGCTGGATCAC
GGCAACATCATCTCCTTCTTCGGCTCGTGGGTGAATCGGGAGAGGGAAGA
GGTGGTTTTCATCACGGAGATTCTCTCGTCGGGCTCCCTGAAGGACTTCA
TTAGGAAAGTGCAAGTCATCCGCTGGAAGATCATAAAGCGCTGGTGCCGT
CAAATCCTCCGCGGCCTGCTCTACCTCCACTCCCACGTGCCCCCCATCAT
CCACCGGGACCTCAAGTGCGACAACATCTTCATCAACGGCTCCTCGGGCG
ACCTGCGGATCGGGGACCTCGGCCTCTCCACCTACATCACCGGCCGCACG
GCCCCCTTGTCGGTACTGGGCACGCCCGAGTTTATGGCACCGGAGCTGTA
CGACGAGAAGTATGACGAGAAGGTAGATGTTTATGCATTCGGGATGTGTG
TGCTGGAGATGGTGACCAAAGAGACGCCCTACTCGGAGTGTGCGAATGCC
GCGCAGATCTATAAGAAGGTCATCGGGCAGGTCCCGCCTCAGGTCTTGTT
TCGTGTGCGGAATCTCCGGGCGCGAGACTTCATTCGTGGCTGTTTGGCCT
CGGACCCGGCCCAGAGACCGACGGTGGAGGGGCTGCTGGAGAGCTCGTTT
CTGAAGCAGCAGGAGGAGGACGACGAGGAGGTGCTGGTGGACTCTGTAGC
TTCTTGCTCCTCGCTCGCCCCTCCGTACCAGGGGGATATGATGCGCGTAA
ACACCCTTTTACAACTACAACTACAACAACAGCAGCCACAGCAACAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGAAGGAGGAGGAGGAGGGTCAGCTGGA
CATGGGGGTGGTGGGCAGCAACCCTGGTGGGCAGCGCAACGGTGTCGTCG
GCCAGCAGGAGCAGCAGCAGCAAAAGCAGAAGCAGCAGCAGCAGCAGCAG
CAGCAGCACAAGATGGGAACATCGGCCAAGCCAGGCATGGAGGCAGCACC
TTCATCCTCCTCTTCTGATTCTGGCGGCTCTTGCGGCAGTGATGGTGACC
CTGCTGAGCTTCGCCATGACCAGTTCCTCCAACATCAACATCACCATCAC
AACCTTAACGGGCACCACGCCGACGGAGGAGAAGGAGGAGGAGAAGGAGG
AGGAGGAGGAGGAGGAGGGGGAGGGAGAAGAGGAGGAGGAGGTGGAGGTG
GGAGACTTGGTCCCTCTCCTCACCTTCCTGAACGCACCCTCTCTCCTCAC
TCTCTTGCCACCTCGGCGACCTCAGACGGCTCCTCCCTCCACCACTATTA
CGACATCCCCCCCACCCCCGCCCTCTCCCACAGTGGCTCTGAAGAAACTC
TAGAGAAATACAATACCTCCTCGCCCGTCCTCGAGGGCCACTTTGGCAGC
TCGGTGCTCCTGGAAGGGTCTGTCGCCCTCCCCGCCCCACCCAGTGCTCT
GCTTGAGGCGGCGCAGCACCAGCATGCACAGCACGGGGGACAGCAGCAGC
ACCATCATCACTCCGACCATCACCACCAACAGCATCTGCGAAATAAGGAT
GGGAAGCCCCTGACGCGTGCCTCGTCCTTCCCTCACCACGGCCACGGCGC
CGACCGCCCCCCGCGCCATGCTGCTTCTCCCATGAGTCAAGCCACCGGGG
CTGGGCCCCGTGGCAGTCACTCCTTACACCATAATCACTCCCTACACCAT
AATCAAGACCACGAAAGCTGGGCCTTGCTGCACGTTAGCGACGACAATGA
GACATCCGGTCCTCCCTCGTCCTCTTCCTCCTCAGCCCGAGGTGGCTTTC
GTCTTGGCAGCAGCATCCTCTCCCGTCGAGGCGGCGCAAGTGGCGGGGGC
GCAGGAACAGCAGGGTTTAAGAGCGGCGCGCCCATCTCTTCCTCCGCGGA
AAGCACCAGCCATCCCTCCCGTCGCCCCTACCAACACATACATCACATCA
AGATCAGCGGTTCGCAGCAGCAGCTACACCAGCAGCAGCAGTCCTCTGCA
CCCTCGACCCCCACGGCCGTCCCCACGGTGCAAGTCCGCGTCGGGGCCGA
CGCCGGCACGGGTGGCTCTGCACGGGACGTGTTGTGTCTGGTGATTCGTG
CCAAGATAAAGGGCAAGCTGAGGGACATCGAATTCGACTTCCACCTCACC
GACGACGACGCCACCCAGGTCGCGCACGAGATGGTCCAAGAGCTCTCCCT
CCCTCCCTCTGATCTCGGCCCCGTAGCTAGCACCATCCGTCGCTTGGCTG
ACGAGTCGCGGCGGGCGTGGGACGAGAACAAGCGGCCACAGCTGCAGCCC
CAGATTCCTCCACATAAGGGGGATCTGCAACGGTCTACGTCCATGGAGGG
GCCGCCGAATAAAGGCGAAGGAGAAGGGAGGGATGGAGGAGTGGTAGGGC
TGCAGCAGCAATACCAAGAGCAGCAGGAGCAGCAGGGAGCAGGGGTAGGA
CGGTCAGTGTTGCCTCGGTCCCTGTCCACCAACAACATGGCCCATCTGGC
TGCGTTGCGAGCGGGTGGGCTCCAACCCGACTTCTCCCTGGACCCCCATC
ACCTCCATCCCCGCCATCAGCTTCACCACCAGACCGGGCAGCCGCCCCAT
ATCCGCACGCACTCTGCCGACATGCAGCAGCAGCAGCAGCATAGAGGCCT
CCAGCAGCACCACCGGAATCGCAGTGACTTGAGTAGCGACGGGTGCTGGA
GTGGTGGAGAGGGAGGGGGCGGGCAGCCGTTGACCTCATTGCCTCCGCAC
TTGCAGCACTACCACCACCCCTCCGACGACGACGTCAGTCGGGCAAGTCC
CGCGGCCTCTCTAGGGGATGACGGGGAGTTCCCTTCCTCCCTTCACTCCT
CCTCCCTCTCACACCACGTTTACGGGCCTGGCCCTGCTCACTCCTATCCG
CACTCGTACCTGCTCATGAGCTCTGACGACGACGACTCGGCGGGCGAGCG
GGAGTATGTGAAGGAAGATGATGAGGAGGACTGTGATGGGGAGATAACCC
GGTTGCGGGCCGACTACGAGAAGGGGCTCCAGCGGTCTCACAAGGCTTTT
TCGATCAGGGTGGAGAATCTGAAGAAGTCGCGGTTGGAGAAGGAGGAAAG
CCACAAGAAGCAGCTGGAGAAGCACCTGCGGGACATGGCGGATTTCGAGC
GGAAAGTGCGGACGGCGGAGAGGGAGCAGATCATGCGCTTGAAGGAGCTT
GAAGAAGAGTGGCGAGCCATCAAAACCGAACACAGGGAACGAAGGCGCCT
TGCCAAGCTGGCTGCTGAGGGAAAAGGAGGGAAGAGAGGCTCTGCCAGCA
GCATCCCCGCCATCGACAGCACAGCGGCGTCGGCATCGGCGGCCACGGGA
ATAAGAAGGCCGTCGTCGCCCTTCCAGCACACGCCCGGTCCCGGAGCGGA
CAGATAGCAGGGGCTATTCAGCTTAGAGGGCGGGGGAAGGGGAGTGAGGA
AAGCTGTGCAGTAGAGGGAAAGAAGAGAGTTTGAGAGAGGGAGAGTATGG
CCGGGAAGTGATAGGAGGGGTATTTAAAACGGAAGTCGAGCAATATGCGG
AGGGCCGACCCACCTTGTATGTAGAAAAGAATATCAGCACCCTCCTGCCG
ATAACTCCTCCTCCCTGGAATGTCATTACTCCTTTCACCCTTCCTTTTCT
TCAATTCCCTCCGTCAGACCATAGCCCTTGATGACGGTGCGTGTGTGCTC
GGCAGGAATAAGCGTGTGCGCCTGTACGTCTACGTCTTGCGGGAATGGCC
TGATATTGCAGCCAACAAGTGAAACATTGAACACCATAGAAAGAAAATCT
TGCATGACTTTGATCTTGAGTAGCAAGATGAGTGACATATTATGGCGCAT
TGATTTTCTGGCAGACGACCCTCTAAACTTTTTACTTTTGCTTGGGTCAT
ACACTTCCTCCGTCGATATTTTTATATCTCGAAGCTCCGCACTACGCCGT
CTGCCCCTCCCGTAAACAAAGGCCATGCCGCCCCCTCCTCCCCGCCAGTC
CTCCACCCAAAACATGAAGCCAAAGCCTTCCCTTCGTGCGCCGTCAGTGT
GTGCAGCGGCTTGGTCGCCCTCAAGTCCCACACGCGCAAAAGCCCGTCGT
GGGTAAGCGCGGCAAGCACATTCTCTCGACGCGGATGCCAGGCAACCCCC
GATATCCACGAACCACAACCAGCCAGCACGCGCTTTCCCGGCGTGGCCGA
TGTCCCTTCCACTCCGTTGTCTGTTGAGGAAGAACGGAGATCCCACACCC
GCAAGCGTCCGTCGGGGTGGCCCGCCGCCACAAGACTACCGGCCGAAGCG
GCAAGCGACGTAACAACCCTGCTGCTGTTGAGTGTCTGCACGCAGTCTTG
TCGCTCCAGATCCCAGGACTTGATGGAGTGATCCCAGGAGGAGGTGAAGA
CCCTGGACACATCGGCCTGGTGCCACTCAATGCCGCTCATGCACTGGCTG
TGGGCCTTCAAAACAGACACGGGCGTCAGGGTGCTGGCGACTGCTTGTAC
TGCTGCCGCCTCCTCCCCGACCTGAACGTCATACATTCTGCGTTTCTTCC
TTTTTTGAGAAGTGATTGTAGAAGAAGAGAAGGCAGGGGTAGAAAACGTT
TCGCCCCCTCCCTCAAGCTTCCAGAAGCACATCATCCCGCTCCAATCACC
CGTGAGCACCTGCTGCTGCTTTCCCCGCACCGCCACGCACTCTACGCTGT
TCTCGTGGCCCATTAAAACGCTCACAGGCCACATCACTATCCCTGCGGCC
GCTGCGATTTCCGTACTCTTCTTCTTGCGGTTGCTGGTTCCCGCCGCCGC
TGCCGACAGCCCCCAGGTCTTGACTAGCTTGTCCTTTCCAGCTGTCACCA
CCACGCTGCCCTTTCCCCCATCGTCTGTATCTAAATGAAAAGCTGCTACG
GCCTTTACCGGCCCAGTGTGAGCTTGGGACCACTCCCCCACACTCTGGCT
GCAATCCTGCGCGGCGTAACACCGCAACTTCCCGTCATACCCTCCTGCCA
CCACTACACCTCCCTCCCTGCCTCCCTGGCAAGCCACTAGACTACCCACC
CAGGCATCCTCGGGCTTGCTGCGAGTGCCCTCAATCGGCGCCTGCAGCGT
TCGGTAGTACTCCACATTTATTGTCACCTCTGTCGACAGCCCCGTGGCCC
GCAAAAACTTGTCCAGGGAGCAGCGCAACAGCTGGTTCTCTATCACAAAG
TCGTATCCACTTGCATTCGTTGTGTTGCCATCTTTTTCCTCCTCCTCTGC
TGATCCTTTGGTCCCACCCTCTATCCCAAGCAAGTGGTTTATAACTTCGG
AAAGCCCGCGGCGATTGAGAGCGACCGGCACGGCCAAGGGCACCTCGTTG
ACACGGATGGTGGGGTCGCGGGTGATGAAGCGGAGACGCACGCGGACATC
GGCGGCGGTGCTGCCACTGGTTTCGTTCATCCTCCTTTGCCTGAAAGGTA
GCAAACGCCCCCGAAAAAGGGTGATAGAGTCAAGTTCAAGCGTAATTGTA
TGTCAGCACATTTCTACGGTCATTTTTGCAAGATGCCTAATTGAAGAGCT
GGAAAGAGGGACAGGACAACGAAATGAATATCACATACTATAATAACCAA
AAATTTCGAGACGGTGCTAGAAGTAATTGCGGTGATGTCTCTACGCATCA
CTAGGCTATCGTCCCACTTTCTCTATCCGACGTCAAACTATCAGGCACTC
CCACATTGAGGTAATCGAGGGGGACTGATTGGGTCGTCTGGGTTCTGAAT
GGGGGCAAGAGTGGAAGAAAGCGATTTGCAGCAGAGAAAGGGGACGAAGA
AGAGAAGGGTGCACATCACAGGGTGACAGAAAAGCATGCCAACCTTGCAC
GCATACATGAGTATGGAGCGAATGGCACAGTGTTGTGGTGGCCAGACCAG
AAAGGACCTTTCAAGTGGGATGAAATACAAATAAACTCGATGCACCACAT
CCACAAACAGACAGCCCAGACAAAACATCCAAACCAATTTTGCCCATTTC
CTGGCCACGATGCACTGCCTCGCGCAGCGAGTCACGCTTAGTACGCATAC
CTTCCGTCTAGGAGCCCCAGGATATTTCTCCTTGTGAGAGGTGATTACGA
TGCCGGAGTAGTTTGCCTGTTGTGCGTCTTTTTTGTCGGAGGAAATCGGG
GTGGTACATGGGTGAGTACGGATACGAGCAATCAGTCAGAAACATTGCGG
CGTGAGAGACAGCGCCGTAGCGGTCCATCCTTTCCAACCTCCTCTCCACC
CACTTACTATACTGTCCGTTGCGGTCAGCTGTTATATATGAAGCGACGCC
ACACCCCATTTTGTTGTCGCGACTAATGTCTTCAGTTTTCAGCTTCTAGT
TGGACAGCTGCAGGGAGTCAACTGAGCTTTACGGACTGCCCAAGTCTCTT
TCTGCTGGCTGCTGTCGTTTACTTGGCTTTTCTTGTCGATTGGAGCACCT
ATCAGGCAAACTTTCATCTCGTCGGTCAGCCCCCTGATTTTATCCACAAC
TCACGCACCCAATCTATATCTTTATTTGACCTAAGACAGAACTGGGATAT
CGAGGACACGATGTGACAGGCACGTCATGAATGCCGCCTCGGATGCAGGT
GACTGAGTAGCCC

Coding sequence (CDS) from alignment at scaffold_24:224360..231522+

>mRNA_8422 ID=mRNA_8422|Name=jgi.p|Nanoce1779_2|673322|organism=Nannochloropsis oceanica|type=CDS|length=3957bp|location=Sequence derived from alignment at scaffold_24:224360..231522+ (Nannochloropsis oceanica)
ATGTCGATGAGCAACAGCAAAAGCGCTGCCACAACGCAGCTGTCGTCCTC
ACCACCCTCCTCCTCACCGATGCAAGGGCAGCAACAGCAACAGCAGCAGC
AACAACAACAAACCCCCTCAGCTCCCCCGTCAGCCCAAGTGCCCTCCGGC
ACCGGAGGAGGGATGAGCGGCGTGGCCAGCACCGCCATGAGCAGCAACAA
TAGCACTGCCTCCCATCTCTCCACGACCCCTCCCACGGATTCATCGCTCA
CCCCTTTCACACCCGGCGGCGGTGGCGGAGGGGGAGGAGGGATAAGCCAC
ATGTCTTCCACAGGCACACTGGGCATTACCATGGCTGGCGAAGGGTCTTT
ATCGGCGTCGGCAGAGGGCCGGGACCCCGGCGAGGAGCTACGGAAGCAGA
TCATTGAGTACTCGCCGCAGAAGCGGTACGTGAAATTCAACGAGGTGCTG
GGGAAGGGGGCGTACAAGATGGTTTACCGGGCATACGACACCAAAGAGGG
CCTGCTGGTGGCCTGGAACACCATCAGCCTGGCGGGACTGCCGAAGCAGG
AGAAGATCCGGATCATGCACGAGGTGAGACTGTTGGAGCAGCTGGATCAC
GGCAACATCATCTCCTTCTTCGGCTCGTGGGTGAATCGGGAGAGGGAAGA
GGTGGTTTTCATCACGGAGATTCTCTCGTCGGGCTCCCTGAAGGACTTCA
TTAGGAAAGTGCAAGTCATCCGCTGGAAGATCATAAAGCGCTGGTGCCGT
CAAATCCTCCGCGGCCTGCTCTACCTCCACTCCCACGTGCCCCCCATCAT
CCACCGGGACCTCAAGTGCGACAACATCTTCATCAACGGCTCCTCGGGCG
ACCTGCGGATCGGGGACCTCGGCCTCTCCACCTACATCACCGGCCGCACG
GCCCCCTTGTCGGTACTGGGCACGCCCGAGTTTATGGCACCGGAGCTGTA
CGACGAGAAGTATGACGAGAAGGTAGATGTTTATGCATTCGGGATGTGTG
TGCTGGAGATGGTGACCAAAGAGACGCCCTACTCGGAGTGTGCGAATGCC
GCGCAGATCTATAAGAAGGTCATCGGGCAGGTCCCGCCTCAGGTCTTGTT
TCGTGTGCGGAATCTCCGGGCGCGAGACTTCATTCGTGGCTGTTTGGCCT
CGGACCCGGCCCAGAGACCGACGGTGGAGGGGCTGCTGGAGAGCTCGTTT
CTGAAGCAGCAGGAGGAGGACGACGAGGAGGTGCTGGTGGACTCTGTAGC
TTCTTGCTCCTCGCTCGCCCCTCCGTACCAGGGGGATATGATGCGCGTAA
ACACCCTTTTACAACTACAACTACAACAACAGCAGCCACAGCAACAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGAAGGAGGAGGAGGAGGGTCAGCTGGA
CATGGGGGTGGTGGGCAGCAACCCTGGTGGGCAGCGCAACGGTGTCGTCG
GCCAGCAGGAGCAGCAGCAGCAAAAGCAGAAGCAGCAGCAGCAGCAGCAG
CAGCAGCACAAGATGGGAACATCGGCCAAGCCAGGCATGGAGGCAGCACC
TTCATCCTCCTCTTCTGATTCTGGCGGCTCTTGCGGCAGTGATGGTGACC
CTGCTGAGCTTCGCCATGACCAGTTCCTCCAACATCAACATCACCATCAC
AACCTTAACGGGCACCACGCCGACGGAGGAGAAGGAGGAGGAGAAGGAGG
AGGAGGAGGAGGAGGAGGGGGAGGGAGAAGAGGAGGAGGAGGTGGAGGTG
GGAGACTTGGTCCCTCTCCTCACCTTCCTGAACGCACCCTCTCTCCTCAC
TCTCTTGCCACCTCGGCGACCTCAGACGGCTCCTCCCTCCACCACTATTA
CGACATCCCCCCCACCCCCGCCCTCTCCCACAGTGGCTCTGAAGAAACTC
TAGAGAAATACAATACCTCCTCGCCCGTCCTCGAGGGCCACTTTGGCAGC
TCGGTGCTCCTGGAAGGGTCTGTCGCCCTCCCCGCCCCACCCAGTGCTCT
GCTTGAGGCGGCGCAGCACCAGCATGCACAGCACGGGGGACAGCAGCAGC
ACCATCATCACTCCGACCATCACCACCAACAGCATCTGCGAAATAAGGAT
GGGAAGCCCCTGACGCGTGCCTCGTCCTTCCCTCACCACGGCCACGGCGC
CGACCGCCCCCCGCGCCATGCTGCTTCTCCCATGAGTCAAGCCACCGGGG
CTGGGCCCCGTGGCAGTCACTCCTTACACCATAATCACTCCCTACACCAT
AATCAAGACCACGAAAGCTGGGCCTTGCTGCACGTTAGCGACGACAATGA
GACATCCGGTCCTCCCTCGTCCTCTTCCTCCTCAGCCCGAGGTGGCTTTC
GTCTTGGCAGCAGCATCCTCTCCCGTCGAGGCGGCGCAAGTGGCGGGGGC
GCAGGAACAGCAGGGTTTAAGAGCGGCGCGCCCATCTCTTCCTCCGCGGA
AAGCACCAGCCATCCCTCCCGTCGCCCCTACCAACACATACATCACATCA
AGATCAGCGGTTCGCAGCAGCAGCTACACCAGCAGCAGCAGTCCTCTGCA
CCCTCGACCCCCACGGCCGTCCCCACGGTGCAAGTCCGCGTCGGGGCCGA
CGCCGGCACGGGTGGCTCTGCACGGGACGTGTTGTGTCTGGTGATTCGTG
CCAAGATAAAGGGCAAGCTGAGGGACATCGAATTCGACTTCCACCTCACC
GACGACGACGCCACCCAGGTCGCGCACGAGATGGTCCAAGAGCTCTCCCT
CCCTCCCTCTGATCTCGGCCCCGTAGCTAGCACCATCCGTCGCTTGGCTG
ACGAGTCGCGGCGGGCGTGGGACGAGAACAAGCGGCCACAGCTGCAGCCC
CAGATTCCTCCACATAAGGGGGATCTGCAACGGTCTACGTCCATGGAGGG
GCCGCCGAATAAAGGCGAAGGAGAAGGGAGGGATGGAGGAGTGGTAGGGC
TGCAGCAGCAATACCAAGAGCAGCAGGAGCAGCAGGGAGCAGGGGTAGGA
CGGTCAGTGTTGCCTCGGTCCCTGTCCACCAACAACATGGCCCATCTGGC
TGCGTTGCGAGCGGGTGGGCTCCAACCCGACTTCTCCCTGGACCCCCATC
ACCTCCATCCCCGCCATCAGCTTCACCACCAGACCGGGCAGCCGCCCCAT
ATCCGCACGCACTCTGCCGACATGCAGCAGCAGCAGCAGCATAGAGGCCT
CCAGCAGCACCACCGGAATCGCAGTGACTTGAGTAGCGACGGGTGCTGGA
GTGGTGGAGAGGGAGGGGGCGGGCAGCCGTTGACCTCATTGCCTCCGCAC
TTGCAGCACTACCACCACCCCTCCGACGACGACGTCAGTCGGGCAAGTCC
CGCGGCCTCTCTAGGGGATGACGGGGAGTTCCCTTCCTCCCTTCACTCCT
CCTCCCTCTCACACCACGTTTACGGGCCTGGCCCTGCTCACTCCTATCCG
CACTCGTACCTGCTCATGAGCTCTGACGACGACGACTCGGCGGGCGAGCG
GGAGTATGTGAAGGAAGATGATGAGGAGGACTGTGATGGGGAGATAACCC
GGTTGCGGGCCGACTACGAGAAGGGGCTCCAGCGGTCTCACAAGGCTTTT
TCGATCAGGGTGGAGAATCTGAAGAAGTCGCGGTTGGAGAAGGAGGAAAG
CCACAAGAAGCAGCTGGAGAAGCACCTGCGGGACATGGCGGATTTCGAGC
GGAAAGTGCGGACGGCGGAGAGGGAGCAGATCATGCGCTTGAAGGAGCTT
GAAGAAGAGTGGCGAGCCATCAAAACCGAACACAGGGAACGAAGGCGCCT
TGCCAAGCTGGCTGCTGAGGGAAAAGGAGGGAAGAGAGGCTCTGCCAGCA
GCATCCCCGCCATCGACAGCACAGCGGCGTCGGCATCGGCGGCCACGGGA
ATAAGAAGGCCGTCGTCGCCCTTCCAGCACACGCCCGGTCCCGGAGCGGA
CAGATAG

Synonyms

Publications