jgi.p|Nanoce1779_2|673322, gene_8422 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|673322
Unique Namegene_8422
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_24:224360..231522 +

Link to JBrowse

Properties
Property NameValue
TranscriptId673408
ProteinId673322
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_24supercontigscaffold_24:224360..231522 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004674protein serine/threonine kinase activity
GO:0004672protein kinase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL039ncniL039Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO23G00730NO23G00730Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|673322mRNA_8422-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|673322mRNA_8422Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|673322

>mRNA_8422-protein ID=mRNA_8422-protein|Name=jgi.p|Nanoce1779_2|673322|organism=Nannochloropsis oceanica|type=polypeptide|length=1319bp
MSMSNSKSAATTQLSSSPPSSSPMQGQQQQQQQQQQQTPSAPPSAQVPSG
TGGGMSGVASTAMSSNNSTASHLSTTPPTDSSLTPFTPGGGGGGGGGISH
MSSTGTLGITMAGEGSLSASAEGRDPGEELRKQIIEYSPQKRYVKFNEVL
GKGAYKMVYRAYDTKEGLLVAWNTISLAGLPKQEKIRIMHEVRLLEQLDH
GNIISFFGSWVNREREEVVFITEILSSGSLKDFIRKVQVIRWKIIKRWCR
QILRGLLYLHSHVPPIIHRDLKCDNIFINGSSGDLRIGDLGLSTYITGRT
APLSVLGTPEFMAPELYDEKYDEKVDVYAFGMCVLEMVTKETPYSECANA
AQIYKKVIGQVPPQVLFRVRNLRARDFIRGCLASDPAQRPTVEGLLESSF
LKQQEEDDEEVLVDSVASCSSLAPPYQGDMMRVNTLLQLQLQQQQPQQQQ
QQQQQQQQKEEEEGQLDMGVVGSNPGGQRNGVVGQQEQQQQKQKQQQQQQ
QQHKMGTSAKPGMEAAPSSSSSDSGGSCGSDGDPAELRHDQFLQHQHHHH
NLNGHHADGGEGGGEGGGGGGGGGGRRGGGGGGGRLGPSPHLPERTLSPH
SLATSATSDGSSLHHYYDIPPTPALSHSGSEETLEKYNTSSPVLEGHFGS
SVLLEGSVALPAPPSALLEAAQHQHAQHGGQQQHHHHSDHHHQQHLRNKD
GKPLTRASSFPHHGHGADRPPRHAASPMSQATGAGPRGSHSLHHNHSLHH
NQDHESWALLHVSDDNETSGPPSSSSSSARGGFRLGSSILSRRGGASGGG
AGTAGFKSGAPISSSAESTSHPSRRPYQHIHHIKISGSQQQLHQQQQSSA
PSTPTAVPTVQVRVGADAGTGGSARDVLCLVIRAKIKGKLRDIEFDFHLT
DDDATQVAHEMVQELSLPPSDLGPVASTIRRLADESRRAWDENKRPQLQP
QIPPHKGDLQRSTSMEGPPNKGEGEGRDGGVVGLQQQYQEQQEQQGAGVG
RSVLPRSLSTNNMAHLAALRAGGLQPDFSLDPHHLHPRHQLHHQTGQPPH
IRTHSADMQQQQQHRGLQQHHRNRSDLSSDGCWSGGEGGGGQPLTSLPPH
LQHYHHPSDDDVSRASPAASLGDDGEFPSSLHSSSLSHHVYGPGPAHSYP
HSYLLMSSDDDDSAGEREYVKEDDEEDCDGEITRLRADYEKGLQRSHKAF
SIRVENLKKSRLEKEESHKKQLEKHLRDMADFERKVRTAEREQIMRLKEL
EEEWRAIKTEHRERRRLAKLAAEGKGGKRGSASSIPAIDSTAASASAATG
IRRPSSPFQHTPGPGADR*
back to top
Synonyms
Publications