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Properties
| Property Name | Value |
|---|
| TranscriptId | 201657 |
| Track | FilteredModels2 |
| ProteinId | 201571 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_25 | supercontig | scaffold_25:138541..139879 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_8096 ID=mRNA_8096|Name=jgi.p|Nanoce1779_2|201571|organism=Nannochloropsis oceanica|type=mRNA|length=1046bp
GGTCCCGTGTCTTTCCGCTTAGCCGGGGCAAGCTATCTTGCACGCCTTCC
CCTGGCAGCAGCTTCATCGTATCCCCTGCAAACGCTTGTGGTTCAATTTT
TCCCCCTCCTCTGTTAACCCCGCCGCGGCACCCTAAGCTACCATGTCTCT
CAAATTTTTGGCCAAGAAGACATGGAACCCCACAAACCTCAAGAACGTCG
AGAAAGTGTGGAAAGCCGAGCAAAAAGCGGCCAACGAAGAGAAGCGTATG
GATGAGTTTCGGAAGCAAATCGCAGAGGAACGACAGCTACAAGAACTTAA
AGAGCTGCAGGTCTCCGCCGGGTTGGTAGATAAGGATCAGATAGCTAAGC
TTGATTGGATGTATGAAGGACCCATGGCGACGATGGCTGACCACCAGCAG
GATACCGAACAGTATTTACTGGGGAAGGAGGTGCAGGTCAAAAAGGAGGA
GAGCGAGGTGCAGCGTGTGGAGAGTCAGCCGGGGATGCTATTTCTCAACT
CGGTGAGTGCGAAGAACGATATGTTCACCCGCCTCCACGAAGACCCTCTT
TTAATGATCAAGCAAAACGAGATACGAAAGAGGGACGATATTGTGAAAAA
CCCCATCAAGATGGCTCGGATCCGGCAGCAGCTGGAGGAGGAACTGGCCC
GGAAAAAAGAGAAGAAACAGGCGAAAAAAGACAAAAAACGAGCCAAGAAA
GATGCGAAGAGGGCGGGAAAACACGACAAGAGACGGAGGGAAGAGAGGGA
AACAGATTTAGCATTAGCTGCAGCGGAATATCTCAAGAAGGTGGGTGAGG
GGGGCAAAAAAAGCGCCAGCAGCAAAAAGGAGGATGAGGAGGAGGAACTG
GGTGGTGGGAGTAGCAGGAGCGATGGGAGCAGTGGGGAGGGGGGGAGGGA
GGGGAGAAAGGAATTGGAGAGAAGGGGGATCAGGAGGGGATATCAAGCTT
AAGATGGAGAAGGAAAATGGATACGACCGTCGGAAGGTCAGCAGCAACGG
CGGCAGCACTAATAGAAAGAAGGAGGAGGAAAGAAGGGGGAAAGAA back to topprotein sequence of jgi.p|Nanoce1779_2|201571 >mRNA_8096-protein ID=mRNA_8096-protein|Name=jgi.p|Nanoce1779_2|201571|organism=Nannochloropsis oceanica|type=polypeptide|length=270bp
MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMDEFRKQIAEERQLQ
ELKELQVSAGLVDKDQIAKLDWMYEGPMATMADHQQDTEQYLLGKEVQVK
KEESEVQRVESQPGMLFLNSVSAKNDMFTRLHEDPLLMIKQNEIRKRDDI
VKNPIKMARIRQQLEEELARKKEKKQAKKDKKRAKKDAKRAGKHDKRRRE
ERETDLALAAAEYLKKVGEGGKKSASSKKEDEEEELGGGSSRSDGSSGEG
GREGRKELERRGIRRGYQA* back to topmRNA from alignment at scaffold_25:138541..139879- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_8096 ID=mRNA_8096|Name=jgi.p|Nanoce1779_2|201571|organism=Nannochloropsis oceanica|type=mRNA|length=1339bp|location=Sequence derived from alignment at scaffold_25:138541..139879- (Nannochloropsis oceanica)
GGTCCCGTGTCTTTCCGCTTAGCCGGGGCAAGCTATCTTGCACGCCTTCC
CCTGGCAGCAGCTTCATCGTATCCCCTGCAAACGCTTGTGGTTCAATTTT
TCCCCCTCCTCTGTTAACCCCGCCGCGGCACCCTAAGCTACCATGTCTCT
CAAATTTTTGGCCAAGAAGGTACGTATGTATGTTCTGTCGAAAGAATGGC
GATGGGACGGGTGCCCGGTGCGTGATGGCGGGTAGCGGAGCTGGCTTCAT
TGTCCCCGCTTTTTCGTTGCCATCTCAGAGGCACATCACCTTTCCCTTGG
ACTATGATTCCTGGTCATGGATATGCCGACGACGGATAAAGAGGACAAAT
GCGCGAGGACAAATGAGCCTTAGTTCTTTCTGGGCATCCGCGCTGTCGTG
GCCTCAGCCATTTCCTCAAACTCACAGATCCTCACTTGCTTTCCTTTCCC
CCGCCCCCCTAGACATGGAACCCCACAAACCTCAAGAACGTCGAGAAAGT
GTGGAAAGCCGAGCAAAAAGCGGCCAACGAAGAGAAGCGTATGGATGAGT
TTCGGAAGCAAATCGCAGAGGAACGACAGCTACAAGAACTTAAAGAGCTG
CAGGTCTCCGCCGGGTTGGTAGATAAGGATCAGATAGCTAAGCTTGATTG
GATGTATGAAGGACCCATGGCGACGATGGCTGACCACCAGCAGGATACCG
AACAGTATTTACTGGGGAAGGAGGTGCAGGTCAAAAAGGAGGAGAGCGAG
GTGCAGCGTGTGGAGAGTCAGCCGGGGATGCTATTTCTCAACTCGGTGAG
TGCGAAGAACGATATGTTCACCCGCCTCCACGAAGACCCTCTTTTAATGA
TCAAGCAAAACGAGATACGAAAGAGGGACGATATTGTGAAAAACCCCATC
AAGATGGCTCGGATCCGGCAGCAGCTGGAGGAGGAACTGGCCCGGAAAAA
AGAGAAGAAACAGGCGAAAAAAGACAAAAAACGAGCCAAGAAAGATGCGA
AGAGGGCGGGAAAACACGACAAGAGACGGAGGGAAGAGAGGGAAACAGAT
TTAGCATTAGCTGCAGCGGAATATCTCAAGAAGGTGGGTGAGGGGGGCAA
AAAAAGCGCCAGCAGCAAAAAGGAGGATGAGGAGGAGGAACTGGGTGGTG
GGAGTAGCAGGAGCGATGGGAGCAGTGGGGAGGGGGGGAGGGAGGGGAGA
AAGGAATTGGAGAGAAGGGGGATCAGGAGGGGATATCAAGCTTAAGATGG
AGAAGGAAAATGGATACGACCGTCGGAAGGTCAGCAGCAACGGCGGCAGC
ACTAATAGAAAGAAGGAGGAGGAAAGAAGGGGGAAAGAA back to topCoding sequence (CDS) from alignment at scaffold_25:138541..139879- >mRNA_8096 ID=mRNA_8096|Name=jgi.p|Nanoce1779_2|201571|organism=Nannochloropsis oceanica|type=CDS|length=1620bp|location=Sequence derived from alignment at scaffold_25:138541..139879- (Nannochloropsis oceanica)
ACATGGAACCCCACAAACCTCAAGAACGTCGAGAAAGTGTGGAAAGCCGA
GCAAAAAGCGGCCAACGAAGAGAAGCGTATGGATGAGTTTCGGAAGCAAA
TCGCAGAGGAACGACAGCTACAAGAACTTAAAGAGCTGCAGGTCTCCGCC
GGGTTGGTAGATAAGGATCAGATAGCTAAGCTTGATTGGATGTATGAAGG
ACCCATGGCGACGATGGCTGACCACCAGCAGGATACCGAACAGTATTTAC
TGGGGAAGGAGGTGCAGGTCAAAAAGGAGGAGAGCGAGGTGCAGCGTGTG
GAGAGTCAGCCGGGGATGCTATTTCTCAACTCGGTGAGTGCGAAGAACGA
TATGTTCACCCGCCTCCACGAAGACCCTCTTTTAATGATCAAGCAAAACG
AGATACGAAAGAGGGACGATATTGTGAAAAACCCCATCAAGATGGCTCGG
ATCCGGCAGCAGCTGGAGGAGGAACTGGCCCGGAAAAAAGAGAAGAAACA
GGCGAAAAAAGACAAAAAACGAGCCAAGAAAGATGCGAAGAGGGCGGGAA
AACACGACAAGAGACGGAGGGAAGAGAGGGAAACAGATTTAGCATTAGCT
GCAGCGGAATATCTCAAGAAGGTGGGTGAGGGGGGCAAAAAAAGCGCCAG
CAGCAAAAAGGAGGATGAGGAGGAGGAACTGGGTGGTGGGAGTAGCAGGA
GCGATGGGAGCAGTGGGGAGGGGGGGAGGGAGGGGAGAAAGGAATTGGAG
AGAAGGGGGATCAGGAGGGGATATCAAGCTTAAATGTCTCTCAAATTTTT
GGCCAAGAAGACATGGAACCCCACAAACCTCAAGAACGTCGAGAAAGTGT
GGAAAGCCGAGCAAAAAGCGGCCAACGAAGAGAAGCGTATGGATGAGTTT
CGGAAGCAAATCGCAGAGGAACGACAGCTACAAGAACTTAAAGAGCTGCA
GGTCTCCGCCGGGTTGGTAGATAAGGATCAGATAGCTAAGCTTGATTGGA
TGTATGAAGGACCCATGGCGACGATGGCTGACCACCAGCAGGATACCGAA
CAGTATTTACTGGGGAAGGAGGTGCAGGTCAAAAAGGAGGAGAGCGAGGT
GCAGCGTGTGGAGAGTCAGCCGGGGATGCTATTTCTCAACTCGGTGAGTG
CGAAGAACGATATGTTCACCCGCCTCCACGAAGACCCTCTTTTAATGATC
AAGCAAAACGAGATACGAAAGAGGGACGATATTGTGAAAAACCCCATCAA
GATGGCTCGGATCCGGCAGCAGCTGGAGGAGGAACTGGCCCGGAAAAAAG
AGAAGAAACAGGCGAAAAAAGACAAAAAACGAGCCAAGAAAGATGCGAAG
AGGGCGGGAAAACACGACAAGAGACGGAGGGAAGAGAGGGAAACAGATTT
AGCATTAGCTGCAGCGGAATATCTCAAGAAGGTGGGTGAGGGGGGCAAAA
AAAGCGCCAGCAGCAAAAAGGAGGATGAGGAGGAGGAACTGGGTGGTGGG
AGTAGCAGGAGCGATGGGAGCAGTGGGGAGGGGGGGAGGGAGGGGAGAAA
GGAATTGGAGAGAAGGGGGATCAGGAGGGGATATCAAGCTTAAATGTCTC
TCAAATTTTTGGCCAAGAAG back to top
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