jgi.p|Nanoce1779_2|201571, gene_8096 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|201571
Unique Namegene_8096
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_25:138541..139879 -

Link to JBrowse

Properties
Property NameValue
TranscriptId201657
ProteinId201571
Product namePre-mRNA splicing factor-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_25supercontigscaffold_25:138541..139879 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL040ncniL040Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|201571mRNA_8096-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|201571mRNA_8096Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|201571

>mRNA_8096-protein ID=mRNA_8096-protein|Name=jgi.p|Nanoce1779_2|201571|organism=Nannochloropsis oceanica|type=polypeptide|length=270bp
MSLKFLAKKTWNPTNLKNVEKVWKAEQKAANEEKRMDEFRKQIAEERQLQ
ELKELQVSAGLVDKDQIAKLDWMYEGPMATMADHQQDTEQYLLGKEVQVK
KEESEVQRVESQPGMLFLNSVSAKNDMFTRLHEDPLLMIKQNEIRKRDDI
VKNPIKMARIRQQLEEELARKKEKKQAKKDKKRAKKDAKRAGKHDKRRRE
ERETDLALAAAEYLKKVGEGGKKSASSKKEDEEEELGGGSSRSDGSSGEG
GREGRKELERRGIRRGYQA*
back to top
Synonyms
Publications