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Properties
| Property Name | Value |
|---|
| TranscriptId | 598888 |
| Track | FilteredModels2 |
| ProteinId | 598802 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_19 | supercontig | scaffold_19:547612..549311 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7447 ID=mRNA_7447|Name=jgi.p|Nanoce1779_2|598802|organism=Nannochloropsis oceanica|type=mRNA|length=1700bp
TTTACTCGTTTATTTGGCAAACTTTCGTTACCAAATTTTGGGCTCGTCTT
TTCTTTACGTTCTGCTGCTCTTTGTGTATATTGTTTGTACACTAATTGTA
TATCTTGTTTTTCATTTACTCTTGACCTTGTTGTCTGCACATTTCTGCTG
GATCGGTGACATTCTCAGACTGTCTAGCAGCTCAACCTCCTCCCCAAAAC
CTTTCTACCAACTTGTAATGCGTCGTGACACAAGTATGCATATCCTCCCC
TTTACTTAAGGTGACCTTTGCACTCACTCCCATGACTTAGTCCGATCTTT
CCCGCCCTGCATACCAGCGCATGGCACATGTCTTCTGCGCTACCTCCCGT
CTCATCTACCCCTCTCGTGCGCCACCCGGAGCCTTTACCCTTCACTTCAC
CCTCGTCCTTTTTTACGATACTTCTGTGACATCGATATTGATCATGCTAA
AGCCTTGTAATATGTTCGAGTTTTTTCTCACTGATAGGTCCTACTACCTC
TACATTCCGCCTCCCCACAAACTACACAGCCAACAACAAAAGCGACTACT
ATCAAACAAAGCCTACATGCGTTTCAACAATATCATCCTCGTCCTCCCCT
TTGTCCTTGCAGCGGGCAACCCCTTCTTCGCCAGCGGCCAAGAGACCACC
TCGAGCCTGCGTGGGACGAACAACAAGGACATTGCGAGTACCACCAATGA
CGATGACAAGCAAATTGATAAATTGGGCACCGCCGAGACGATCCCTGTCG
TCCCCGTCGAAGAGCCTGTCCCACCCATGGAGCCAATGAAGGCAGAGAGA
GAAATGGAAGGCGGGCAAAAGGAAAATACTATGGTTGAGGGCCACGAGGG
AGGAAGAGAGAAAGGGGGGATGGGGCACAACTCGAAGGGCGAGGTTGTCG
ACAACAAGGGGATGGACGACGACATGATCACCGAAGGCGACAATGGCCTC
CAATTTGAGAGCGCAGGTCCCTCGGAGGGAGATAAGGGATACTACAAAGG
TGGGTGGGGGCGTGGGGGTTGGGGATGGAGGAAAAAAGGCGGGTGGAACA
GGAACTACAACAATAACTGGAATAACCAGAGGGGGTGGGGCCGCGGAGGC
TGGTAGAGACTAGGAGGCTGCTTGAATGTGATTCATCACGATGTTGGAAG
GGTGGGAGGAGAGAGAGACGCCAATGAGGCTACAACCGGCGCCATTTTTT
TTACTGTCCTCTCCATTGCTGTCTGAGGCCTCTACACAGAAATACAAACA
GAAAATGAGTGGAACCCCTCCAAAAAAAAGAGGCAGCATGCCCACACTTA
GGCCAGGGTAAAGAAAATGAAAGGGAAATAAAAAAGAAAGGAAAAGGAAA
AGAGGGAGGGGGAGGATTAAGGGAAAGAAGATAAAGAAGAGGGGTGCTAG
GATGATGATGAAAAGTGATAAGGGGAAGATATTGACACGTCAGAGGAATA
AAGAGAAAAACAGGGAGTCGACACCACTGGGGGTGGGACGACAAGAGAGA
AAGTGCGGAAGAAGAATAGGGAGGCTGTGTGTGATATGAAGGGATATTAA
TATTACATAATAAATAATTGGAAGCGTGGGTATGGATGTCGTTCTGCGAA
TGAGAGGCGCTGGCCTCTCATAGCAAGCACGCCCCTCAACGCCATATTTA
AGATTCAAAATTTATACTAAATGAACAAGTCATCATCCTTTCCGGCTGGG back to topprotein sequence of jgi.p|Nanoce1779_2|598802 >mRNA_7447-protein ID=mRNA_7447-protein|Name=jgi.p|Nanoce1779_2|598802|organism=Nannochloropsis oceanica|type=polypeptide|length=262bp
MAHVFCATSRLIYPSRAPPGAFTLHFTLVLFYDTSVTSILIMLKPCNMFE
FFLTDRSYYLYIPPPHKLHSQQQKRLLSNKAYMRFNNIILVLPFVLAAGN
PFFASGQETTSSLRGTNNKDIASTTNDDDKQIDKLGTAETIPVVPVEEPV
PPMEPMKAEREMEGGQKENTMVEGHEGGREKGGMGHNSKGEVVDNKGMDD
DMITEGDNGLQFESAGPSEGDKGYYKGGWGRGGWGWRKKGGWNRNYNNNW
NNQRGWGRGGW* back to topmRNA from alignment at scaffold_19:547612..549311- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7447 ID=mRNA_7447|Name=jgi.p|Nanoce1779_2|598802|organism=Nannochloropsis oceanica|type=mRNA|length=1700bp|location=Sequence derived from alignment at scaffold_19:547612..549311- (Nannochloropsis oceanica)
TTTACTCGTTTATTTGGCAAACTTTCGTTACCAAATTTTGGGCTCGTCTT
TTCTTTACGTTCTGCTGCTCTTTGTGTATATTGTTTGTACACTAATTGTA
TATCTTGTTTTTCATTTACTCTTGACCTTGTTGTCTGCACATTTCTGCTG
GATCGGTGACATTCTCAGACTGTCTAGCAGCTCAACCTCCTCCCCAAAAC
CTTTCTACCAACTTGTAATGCGTCGTGACACAAGTATGCATATCCTCCCC
TTTACTTAAGGTGACCTTTGCACTCACTCCCATGACTTAGTCCGATCTTT
CCCGCCCTGCATACCAGCGCATGGCACATGTCTTCTGCGCTACCTCCCGT
CTCATCTACCCCTCTCGTGCGCCACCCGGAGCCTTTACCCTTCACTTCAC
CCTCGTCCTTTTTTACGATACTTCTGTGACATCGATATTGATCATGCTAA
AGCCTTGTAATATGTTCGAGTTTTTTCTCACTGATAGGTCCTACTACCTC
TACATTCCGCCTCCCCACAAACTACACAGCCAACAACAAAAGCGACTACT
ATCAAACAAAGCCTACATGCGTTTCAACAATATCATCCTCGTCCTCCCCT
TTGTCCTTGCAGCGGGCAACCCCTTCTTCGCCAGCGGCCAAGAGACCACC
TCGAGCCTGCGTGGGACGAACAACAAGGACATTGCGAGTACCACCAATGA
CGATGACAAGCAAATTGATAAATTGGGCACCGCCGAGACGATCCCTGTCG
TCCCCGTCGAAGAGCCTGTCCCACCCATGGAGCCAATGAAGGCAGAGAGA
GAAATGGAAGGCGGGCAAAAGGAAAATACTATGGTTGAGGGCCACGAGGG
AGGAAGAGAGAAAGGGGGGATGGGGCACAACTCGAAGGGCGAGGTTGTCG
ACAACAAGGGGATGGACGACGACATGATCACCGAAGGCGACAATGGCCTC
CAATTTGAGAGCGCAGGTCCCTCGGAGGGAGATAAGGGATACTACAAAGG
TGGGTGGGGGCGTGGGGGTTGGGGATGGAGGAAAAAAGGCGGGTGGAACA
GGAACTACAACAATAACTGGAATAACCAGAGGGGGTGGGGCCGCGGAGGC
TGGTAGAGACTAGGAGGCTGCTTGAATGTGATTCATCACGATGTTGGAAG
GGTGGGAGGAGAGAGAGACGCCAATGAGGCTACAACCGGCGCCATTTTTT
TTACTGTCCTCTCCATTGCTGTCTGAGGCCTCTACACAGAAATACAAACA
GAAAATGAGTGGAACCCCTCCAAAAAAAAGAGGCAGCATGCCCACACTTA
GGCCAGGGTAAAGAAAATGAAAGGGAAATAAAAAAGAAAGGAAAAGGAAA
AGAGGGAGGGGGAGGATTAAGGGAAAGAAGATAAAGAAGAGGGGTGCTAG
GATGATGATGAAAAGTGATAAGGGGAAGATATTGACACGTCAGAGGAATA
AAGAGAAAAACAGGGAGTCGACACCACTGGGGGTGGGACGACAAGAGAGA
AAGTGCGGAAGAAGAATAGGGAGGCTGTGTGTGATATGAAGGGATATTAA
TATTACATAATAAATAATTGGAAGCGTGGGTATGGATGTCGTTCTGCGAA
TGAGAGGCGCTGGCCTCTCATAGCAAGCACGCCCCTCAACGCCATATTTA
AGATTCAAAATTTATACTAAATGAACAAGTCATCATCCTTTCCGGCTGGG
back to topCoding sequence (CDS) from alignment at scaffold_19:547612..549311- >mRNA_7447 ID=mRNA_7447|Name=jgi.p|Nanoce1779_2|598802|organism=Nannochloropsis oceanica|type=CDS|length=786bp|location=Sequence derived from alignment at scaffold_19:547612..549311- (Nannochloropsis oceanica)
ATGGCACATGTCTTCTGCGCTACCTCCCGTCTCATCTACCCCTCTCGTGC
GCCACCCGGAGCCTTTACCCTTCACTTCACCCTCGTCCTTTTTTACGATA
CTTCTGTGACATCGATATTGATCATGCTAAAGCCTTGTAATATGTTCGAG
TTTTTTCTCACTGATAGGTCCTACTACCTCTACATTCCGCCTCCCCACAA
ACTACACAGCCAACAACAAAAGCGACTACTATCAAACAAAGCCTACATGC
GTTTCAACAATATCATCCTCGTCCTCCCCTTTGTCCTTGCAGCGGGCAAC
CCCTTCTTCGCCAGCGGCCAAGAGACCACCTCGAGCCTGCGTGGGACGAA
CAACAAGGACATTGCGAGTACCACCAATGACGATGACAAGCAAATTGATA
AATTGGGCACCGCCGAGACGATCCCTGTCGTCCCCGTCGAAGAGCCTGTC
CCACCCATGGAGCCAATGAAGGCAGAGAGAGAAATGGAAGGCGGGCAAAA
GGAAAATACTATGGTTGAGGGCCACGAGGGAGGAAGAGAGAAAGGGGGGA
TGGGGCACAACTCGAAGGGCGAGGTTGTCGACAACAAGGGGATGGACGAC
GACATGATCACCGAAGGCGACAATGGCCTCCAATTTGAGAGCGCAGGTCC
CTCGGAGGGAGATAAGGGATACTACAAAGGTGGGTGGGGGCGTGGGGGTT
GGGGATGGAGGAAAAAAGGCGGGTGGAACAGGAACTACAACAATAACTGG
AATAACCAGAGGGGGTGGGGCCGCGGAGGCTGGTAG back to top
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