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Properties
| Property Name | Value |
|---|
| TranscriptId | 598870 |
| Track | FilteredModels2 |
| ProteinId | 598784 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_19 | supercontig | scaffold_19:531371..533006 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7443 ID=mRNA_7443|Name=jgi.p|Nanoce1779_2|598784|organism=Nannochloropsis oceanica|type=mRNA|length=1636bp
GGAGGAGGGGAGGGAGGAGGAGGAGGGGGAGGAGGAGGGATGCCGGACCT
GGCAAGTTTGATGAGTGCGTTCGGTGGTGGTGGTGGTGGTGGTGGTGGAG
GAGGAGGAGGAGAGGGCGGAGGACCGTCGTCGGGGTGGGATAGTGGGGAG
GATGGGGAGAAGGGGGGAAGGGGGGGAGAGCAGTGAGCAAATTTAAGGAA
GTGGGTAAATGGCCGGGGAGGAGCGGAGATACAGAAAAGGAAGGGGGAAA
AGAAAGGAGAAGGGGCAAGGAAAGAAGCCGTCTTGCAGGTGGAAGAAAAA
GAAGTAGGACGAAGGGGTGGAGGAGGAGGAGAATGAAAGGAGGAGGACGA
TGACGAAGAAAAAAGAAAAAACCGAAGACGATGTCCCAGGACTCCATCCA
CCCTGCGATCCTCCGGCAATCCTGAAAAGCACAATATCGCTTGCTTGTAA
ATCATTTATGCTATCACAATTAGCTAATCTGTGCTAATGTTCTTATGTAT
GACCAGTCGACACCATTCCACAGCGTCATTCTTGGTGTACACCCCACCCT
AAGCCCTACGGGATGCACTACCGTCTTCAGCCTCCTGGCCAACCCCACAC
AACTGACGCAGCTTCTTTCGCTATCCCCTTCTTCTTATCCGTCTTGCTCT
GGTCCCACCTGGTGGCTGTGGCCCCTCAACCCGCCTGCCGAAGCCTGCAC
TTGTCCCGAAGTTGGCAACCGTAGACTTACCTTTAGTGGCGTGTGGGACA
GCCTGGACTGGTCTGAACCGTTCATGATCCGCAGGGCAACAATGGCCGCA
ACACGTCGGCCATCTCTCCTGCCGCCTGATTCCCCATTCCCGGTCTTCCA
TCTGTTCTCCTTACCCGGTGGTGCTATCGTCAAAGAGAATTGGTCGAAGA
CCACAGGTGGAAGGCCTTGTCTTCCATTCTCTCTCGCATCCAAGATGAGG
TCTGTAAATGCTACCTCAAACCCCGTAGCCTTCCCCTCCCCCTGCCGCAT
TTTCTCTCCATTCCTCGTCTCTCCCAATGCGGGCTGCGCTTTATTCCGGT
GCGACGAACTCTCGTTGCCCGTGCTGTTTGTCACGTCGCCTGCTCCGCAG
CCCCCGGTTAGGTCAACCGGTTGTTCCCGCCCATGCCTAGTCTTCTCCTG
CTTTGCCTCCTGGCCATCGGACATTCTGCTCCTCTCCCCTCTATCCCCTT
CCTGTCTGGGGGGAAACGTTTCGATCTCTTCCACATCAGCTGATCCCCGT
GAAACTCCTCCACCATGCATGCCGACTCTCCCGACAGCCTGCTTCGAGGC
GTTGCTTCCGTTCAGATGCACCGCTTAATATCTCAGCTCATCTAGTACCA
CACCTTCGGTACATTTAACCACATATGCTATGTCAAGCAGGTCTTGTTAG
GCATTAGCTGCTCTCGGGCCCAGCAAACCGCGTGTGCCACCCATACGCGC
TGCAACACAGACGCAGACGCAGAGAGTGGGAGGTCAGGCAACTTTGTGGA
CCACCCAAAACATACGATTAATGTCGAAATACGCTAGAGGAAAAAGTATT
CTAGTGCGTGGCTAGAGTTTTAGATTTGTAAGCCAGAATGAAAAAGATTT
GCTAAACCTATTCCAGGTAGTCCGCCGAGACTGTGT back to topprotein sequence of jgi.p|Nanoce1779_2|598784 >mRNA_7443-protein ID=mRNA_7443-protein|Name=jgi.p|Nanoce1779_2|598784|organism=Nannochloropsis oceanica|type=polypeptide|length=278bp
MYDQSTPFHSVILGVHPTLSPTGCTTVFSLLANPTQLTQLLSLSPSSYPS
CSGPTWWLWPLNPPAEACTCPEVGNRRLTFSGVWDSLDWSEPFMIRRATM
AATRRPSLLPPDSPFPVFHLFSLPGGAIVKENWSKTTGGRPCLPFSLASK
MRSVNATSNPVAFPSPCRIFSPFLVSPNAGCALFRCDELSLPVLFVTSPA
PQPPVRSTGCSRPCLVFSCFASWPSDILLLSPLSPSCLGGNVSISSTSAD
PRETPPPCMPTLPTACFEALLPFRCTA* back to topmRNA from alignment at scaffold_19:531371..533006- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7443 ID=mRNA_7443|Name=jgi.p|Nanoce1779_2|598784|organism=Nannochloropsis oceanica|type=mRNA|length=1636bp|location=Sequence derived from alignment at scaffold_19:531371..533006- (Nannochloropsis oceanica)
GGAGGAGGGGAGGGAGGAGGAGGAGGGGGAGGAGGAGGGATGCCGGACCT
GGCAAGTTTGATGAGTGCGTTCGGTGGTGGTGGTGGTGGTGGTGGTGGAG
GAGGAGGAGGAGAGGGCGGAGGACCGTCGTCGGGGTGGGATAGTGGGGAG
GATGGGGAGAAGGGGGGAAGGGGGGGAGAGCAGTGAGCAAATTTAAGGAA
GTGGGTAAATGGCCGGGGAGGAGCGGAGATACAGAAAAGGAAGGGGGAAA
AGAAAGGAGAAGGGGCAAGGAAAGAAGCCGTCTTGCAGGTGGAAGAAAAA
GAAGTAGGACGAAGGGGTGGAGGAGGAGGAGAATGAAAGGAGGAGGACGA
TGACGAAGAAAAAAGAAAAAACCGAAGACGATGTCCCAGGACTCCATCCA
CCCTGCGATCCTCCGGCAATCCTGAAAAGCACAATATCGCTTGCTTGTAA
ATCATTTATGCTATCACAATTAGCTAATCTGTGCTAATGTTCTTATGTAT
GACCAGTCGACACCATTCCACAGCGTCATTCTTGGTGTACACCCCACCCT
AAGCCCTACGGGATGCACTACCGTCTTCAGCCTCCTGGCCAACCCCACAC
AACTGACGCAGCTTCTTTCGCTATCCCCTTCTTCTTATCCGTCTTGCTCT
GGTCCCACCTGGTGGCTGTGGCCCCTCAACCCGCCTGCCGAAGCCTGCAC
TTGTCCCGAAGTTGGCAACCGTAGACTTACCTTTAGTGGCGTGTGGGACA
GCCTGGACTGGTCTGAACCGTTCATGATCCGCAGGGCAACAATGGCCGCA
ACACGTCGGCCATCTCTCCTGCCGCCTGATTCCCCATTCCCGGTCTTCCA
TCTGTTCTCCTTACCCGGTGGTGCTATCGTCAAAGAGAATTGGTCGAAGA
CCACAGGTGGAAGGCCTTGTCTTCCATTCTCTCTCGCATCCAAGATGAGG
TCTGTAAATGCTACCTCAAACCCCGTAGCCTTCCCCTCCCCCTGCCGCAT
TTTCTCTCCATTCCTCGTCTCTCCCAATGCGGGCTGCGCTTTATTCCGGT
GCGACGAACTCTCGTTGCCCGTGCTGTTTGTCACGTCGCCTGCTCCGCAG
CCCCCGGTTAGGTCAACCGGTTGTTCCCGCCCATGCCTAGTCTTCTCCTG
CTTTGCCTCCTGGCCATCGGACATTCTGCTCCTCTCCCCTCTATCCCCTT
CCTGTCTGGGGGGAAACGTTTCGATCTCTTCCACATCAGCTGATCCCCGT
GAAACTCCTCCACCATGCATGCCGACTCTCCCGACAGCCTGCTTCGAGGC
GTTGCTTCCGTTCAGATGCACCGCTTAATATCTCAGCTCATCTAGTACCA
CACCTTCGGTACATTTAACCACATATGCTATGTCAAGCAGGTCTTGTTAG
GCATTAGCTGCTCTCGGGCCCAGCAAACCGCGTGTGCCACCCATACGCGC
TGCAACACAGACGCAGACGCAGAGAGTGGGAGGTCAGGCAACTTTGTGGA
CCACCCAAAACATACGATTAATGTCGAAATACGCTAGAGGAAAAAGTATT
CTAGTGCGTGGCTAGAGTTTTAGATTTGTAAGCCAGAATGAAAAAGATTT
GCTAAACCTATTCCAGGTAGTCCGCCGAGACTGTGT back to topCoding sequence (CDS) from alignment at scaffold_19:531371..533006- >mRNA_7443 ID=mRNA_7443|Name=jgi.p|Nanoce1779_2|598784|organism=Nannochloropsis oceanica|type=CDS|length=834bp|location=Sequence derived from alignment at scaffold_19:531371..533006- (Nannochloropsis oceanica)
ATGTATGACCAGTCGACACCATTCCACAGCGTCATTCTTGGTGTACACCC
CACCCTAAGCCCTACGGGATGCACTACCGTCTTCAGCCTCCTGGCCAACC
CCACACAACTGACGCAGCTTCTTTCGCTATCCCCTTCTTCTTATCCGTCT
TGCTCTGGTCCCACCTGGTGGCTGTGGCCCCTCAACCCGCCTGCCGAAGC
CTGCACTTGTCCCGAAGTTGGCAACCGTAGACTTACCTTTAGTGGCGTGT
GGGACAGCCTGGACTGGTCTGAACCGTTCATGATCCGCAGGGCAACAATG
GCCGCAACACGTCGGCCATCTCTCCTGCCGCCTGATTCCCCATTCCCGGT
CTTCCATCTGTTCTCCTTACCCGGTGGTGCTATCGTCAAAGAGAATTGGT
CGAAGACCACAGGTGGAAGGCCTTGTCTTCCATTCTCTCTCGCATCCAAG
ATGAGGTCTGTAAATGCTACCTCAAACCCCGTAGCCTTCCCCTCCCCCTG
CCGCATTTTCTCTCCATTCCTCGTCTCTCCCAATGCGGGCTGCGCTTTAT
TCCGGTGCGACGAACTCTCGTTGCCCGTGCTGTTTGTCACGTCGCCTGCT
CCGCAGCCCCCGGTTAGGTCAACCGGTTGTTCCCGCCCATGCCTAGTCTT
CTCCTGCTTTGCCTCCTGGCCATCGGACATTCTGCTCCTCTCCCCTCTAT
CCCCTTCCTGTCTGGGGGGAAACGTTTCGATCTCTTCCACATCAGCTGAT
CCCCGTGAAACTCCTCCACCATGCATGCCGACTCTCCCGACAGCCTGCTT
CGAGGCGTTGCTTCCGTTCAGATGCACCGCTTAA back to top
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