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Properties
| Property Name | Value |
|---|
| TranscriptId | 598863 |
| Track | FilteredModels2 |
| ProteinId | 598777 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_19 | supercontig | scaffold_19:526507..528202 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7440 ID=mRNA_7440|Name=jgi.p|Nanoce1779_2|598777|organism=Nannochloropsis oceanica|type=mRNA|length=912bp
ACAGGTTCATATCACCCGCAACAACAACAACAACACACGCACGACAACCA
TGTCCTGTCGCATCTACGTTGGCAATTTGCCTATGGACGTTCGAGAGCGA
GAGCTTGACGATCTTTTTTACAAGTACGGGCGCATCCGTGGCATTGACAT
TAAACGGCCTAATCGCCCCCCCGCCTATGCCTTCGTCGCTTTCGAGGATC
CTCGGGACGCTAAGGATGCTGTCTACTACCGAGACAATTACGACTTTGAC
GGGGGCCGTATCCGCGTGGAGCTGGCTAATGAGGCCCCTCGTCGACGGGA
TGGAGGCTTCGGCGGTGGGCGTGGTGGAGGGCGCTCTCGCACTGACTTCC
GGCTGGAGGTGACGGATCTCCCCGACAGGACATCTTGGCAAGACCTCAAG
GATTACTTCAAGGCCGTGGGGGAGGTGCTGTACGCGGACGTGAACAGGGA
CGGGGAGGGTGTGGTGGAGTTTGCAAATAAAGATGACATGTTCGCTGCCA
AGCGGAAGCTCGATGGCACGGTTTTCAAGAACCCTTTTGACTCTCGCGAG
ATCCGGGTCAGGTTGCCCAAGGGGAGCACTCTCCGATCCTCCTCCCGCAG
CAAGAGCCGGAGCCACAGTCGATCGCGCTCCCCCCCTTCCTCCCGCCGTC
GCTCCCGCTCACCCCTCTCTCGATCACGATCTCCGCCTTCCAAGAAAAAG
GGGGGAAGGGGCACAGACGACGAGGAGGAGGGAAGAGGGGGGGAGGGAAA
GAAGGCCGGGAGGAAGATGAGCGAGGCGTCGGCGGGGGATAGCAGCCCGG
AGAGGAGCCCGAGGAAGGGGAAGAAAGAGGAGGAGGAGGAGGAGGGAGGG
CCCAGGGATGAGATTTAAGTGAGAAGGAGGAGGATCAGGACGCAGAGAGA
AAGGAGCAGGGG back to topprotein sequence of jgi.p|Nanoce1779_2|598777 >mRNA_7440-protein ID=mRNA_7440-protein|Name=jgi.p|Nanoce1779_2|598777|organism=Nannochloropsis oceanica|type=polypeptide|length=273bp
MSCRIYVGNLPMDVRERELDDLFYKYGRIRGIDIKRPNRPPAYAFVAFED
PRDAKDAVYYRDNYDFDGGRIRVELANEAPRRRDGGFGGGRGGGRSRTDF
RLEVTDLPDRTSWQDLKDYFKAVGEVLYADVNRDGEGVVEFANKDDMFAA
KRKLDGTVFKNPFDSREIRVRLPKGSTLRSSSRSKSRSHSRSRSPPSSRR
RSRSPLSRSRSPPSKKKGGRGTDDEEEGRGGEGKKAGRKMSEASAGDSSP
ERSPRKGKKEEEEEEGGPRDEI* back to topmRNA from alignment at scaffold_19:526507..528202+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7440 ID=mRNA_7440|Name=jgi.p|Nanoce1779_2|598777|organism=Nannochloropsis oceanica|type=mRNA|length=1696bp|location=Sequence derived from alignment at scaffold_19:526507..528202+ (Nannochloropsis oceanica)
ACAGGTTCATATCACCCGCAACAACAACAACAACACACGCACGACAACCA
TGTCCTGTCGCATCTACGTTGGTACGTTTCCTCCTTCCCTCCACTCTTTC
CTCTTAGTTCCCTCCCTCATCACCTTCCCTCTGCAAGACCCGACTTCCCC
TCTCATCTTTCCATCCCTCTATCCTATTCTACCTCCAGGCAATTTGCCTA
TGGACGTTCGAGAGCGAGAGCTTGACGATCTTTTTTACAAGTACGGGCGC
ATCCGTGGCATTGACATTAAACGGCCTAATCGGTATTCATGAAGGAAGGG
AGGGGGCGATGGAGGGGAAGTAAGGTCCGATGAACGCAGCCATTGTTCTG
GATTTCTTACATCCATCTCAGTCTGGCAATTAATGGACTCATTACAGGCC
ATGCATGTCTTTCTTGGTCTGACAAACCTACCATCCATCCCCCCTCCCCT
TCCTAGCCCCCCCGCCTATGCCTTCGTCGCTTTCGAGGATCCTCGGGACG
CTAAGGATGCTGTCTACTACCGAGACAATTACGACTTTGACGGGGGCCGT
ATCCGCGTGGAGCTGGCTAATGAGGCCCCTCGTCGACGGGATGGAGGTAT
GCCTTCCTTCCATCCTTCCCTCCCTCCCTCCCTCCCTCCCTCTTACCGTG
GGGATGGCCCGCTTTACTCATCCTTCTCAATTATTCCCATCCCTCCCTCC
CTGTCTGTCTGTTGGTGGCAGGCTTCGGCGGTGGGCGTGGTGGAGGGCGC
TCTCGCACTGACTTCCGGCTGGAGGTGACGGATCTCCCCGACAGGACATC
TTGGCAAGACCTCAAGGTACCTCCCTCCCTTCCTCCCTCCCTTCCTCCCT
TCTTCCCTCCCTCCCTCTCTCCCTCCCTTCTTCCCTTCTATGGATGAGGT
GTTCCACGCCGACGTGAAGAGGGACGCGGCGACTGTCTCCACACACCTTC
CCCTTCCTTCCGCCCTCCCTCCCTCTTACACCTGCCCCCCCTTTCCCCTT
CTCTCCTTCCCTCCCTCTTACACCTCCCCGCCCTCCTCCCCCCTCCAGGA
TTACTTCAAGGCCGTGGGGGAGGTGCTGTACGCGGACGTGAACAGGGACG
GGGAGGGTGTGGTGGAGTTTGCAAATAAAGATGACATGTTCGCTGCCAAG
CGGAAGCTCGATGGCACGGTTTTCAAGAACCCTTTTGACTCTCGCGAGGT
ACGCCCTCGCTCCCTCCCTCCCTCCCTTCCCCCCAGCCTCCCTCCCTCCC
TCCTTCCAGCCCTCTTTCTGCAGCACACGCCAGAGCCCCAACACCTTTAC
CCTCCCTCCGTCCCTCCCTCCCTCCCTCCCTCAGATCCGGGTCAGGTTGC
CCAAGGGGAGCACTCTCCGATCCTCCTCCCGCAGCAAGAGCCGGAGCCAC
AGTCGATCGCGCTCCCCCCCTTCCTCCCGCCGTCGCTCCCGCTCACCCCT
CTCTCGATCACGATCTCCGCCTTCCAAGAAAAAGGGGGGAAGGGGCACAG
ACGACGAGGAGGAGGGAAGAGGGGGGGAGGGAAAGAAGGCCGGGAGGAAG
ATGAGCGAGGCGTCGGCGGGGGATAGCAGCCCGGAGAGGAGCCCGAGGAA
GGGGAAGAAAGAGGAGGAGGAGGAGGAGGGAGGGCCCAGGGATGAGATTT
AAGTGAGAAGGAGGAGGATCAGGACGCAGAGAGAAAGGAGCAGGGG back to topCoding sequence (CDS) from alignment at scaffold_19:526507..528202+ >mRNA_7440 ID=mRNA_7440|Name=jgi.p|Nanoce1779_2|598777|organism=Nannochloropsis oceanica|type=CDS|length=4914bp|location=Sequence derived from alignment at scaffold_19:526507..528202+ (Nannochloropsis oceanica)
ATGTCCTGTCGCATCTACGTTGGCAATTTGCCTATGGACGTTCGAGAGCG
AGAGCTTGACGATCTTTTTTACAAGTACGGGCGCATCCGTGGCATTGACA
TTAAACGGCCTAATCGCCCCCCCGCCTATGCCTTCGTCGCTTTCGAGGAT
CCTCGGGACGCTAAGGATGCTGTCTACTACCGAGACAATTACGACTTTGA
CGGGGGCCGTATCCGCGTGGAGCTGGCTAATGAGGCCCCTCGTCGACGGG
ATGGAGGCTTCGGCGGTGGGCGTGGTGGAGGGCGCTCTCGCACTGACTTC
CGGCTGGAGGTGACGGATCTCCCCGACAGGACATCTTGGCAAGACCTCAA
GGATTACTTCAAGGCCGTGGGGGAGGTGCTGTACGCGGACGTGAACAGGG
ACGGGGAGGGTGTGGTGGAGTTTGCAAATAAAGATGACATGTTCGCTGCC
AAGCGGAAGCTCGATGGCACGGTTTTCAAGAACCCTTTTGACTCTCGCGA
GATCCGGGTCAGGTTGCCCAAGGGGAGCACTCTCCGATCCTCCTCCCGCA
GCAAGAGCCGGAGCCACAGTCGATCGCGCTCCCCCCCTTCCTCCCGCCGT
CGCTCCCGCTCACCCCTCTCTCGATCACGATCTCCGCCTTCCAAGAAAAA
GGGGGGAAGGGGCACAGACGACGAGGAGGAGGGAAGAGGGGGGGAGGGAA
AGAAGGCCGGGAGGAAGATGAGCGAGGCGTCGGCGGGGGATAGCAGCCCG
GAGAGGAGCCCGAGGAAGGGGAAGAAAGAGGAGGAGGAGGAGGAGGGAGG
GCCCAGGGATGAGATTTAAATGTCCTGTCGCATCTACGTTGGCAATTTGC
CTATGGACGTTCGAGAGCGAGAGCTTGACGATCTTTTTTACAAGTACGGG
CGCATCCGTGGCATTGACATTAAACGGCCTAATCGCCCCCCCGCCTATGC
CTTCGTCGCTTTCGAGGATCCTCGGGACGCTAAGGATGCTGTCTACTACC
GAGACAATTACGACTTTGACGGGGGCCGTATCCGCGTGGAGCTGGCTAAT
GAGGCCCCTCGTCGACGGGATGGAGGCTTCGGCGGTGGGCGTGGTGGAGG
GCGCTCTCGCACTGACTTCCGGCTGGAGGTGACGGATCTCCCCGACAGGA
CATCTTGGCAAGACCTCAAGGATTACTTCAAGGCCGTGGGGGAGGTGCTG
TACGCGGACGTGAACAGGGACGGGGAGGGTGTGGTGGAGTTTGCAAATAA
AGATGACATGTTCGCTGCCAAGCGGAAGCTCGATGGCACGGTTTTCAAGA
ACCCTTTTGACTCTCGCGAGATCCGGGTCAGGTTGCCCAAGGGGAGCACT
CTCCGATCCTCCTCCCGCAGCAAGAGCCGGAGCCACAGTCGATCGCGCTC
CCCCCCTTCCTCCCGCCGTCGCTCCCGCTCACCCCTCTCTCGATCACGAT
CTCCGCCTTCCAAGAAAAAGGGGGGAAGGGGCACAGACGACGAGGAGGAG
GGAAGAGGGGGGGAGGGAAAGAAGGCCGGGAGGAAGATGAGCGAGGCGTC
GGCGGGGGATAGCAGCCCGGAGAGGAGCCCGAGGAAGGGGAAGAAAGAGG
AGGAGGAGGAGGAGGGAGGGCCCAGGGATGAGATTTAAATGTCCTGTCGC
ATCTACGTTGGCAATTTGCCTATGGACGTTCGAGAGCGAGAGCTTGACGA
TCTTTTTTACAAGTACGGGCGCATCCGTGGCATTGACATTAAACGGCCTA
ATCGCCCCCCCGCCTATGCCTTCGTCGCTTTCGAGGATCCTCGGGACGCT
AAGGATGCTGTCTACTACCGAGACAATTACGACTTTGACGGGGGCCGTAT
CCGCGTGGAGCTGGCTAATGAGGCCCCTCGTCGACGGGATGGAGGCTTCG
GCGGTGGGCGTGGTGGAGGGCGCTCTCGCACTGACTTCCGGCTGGAGGTG
ACGGATCTCCCCGACAGGACATCTTGGCAAGACCTCAAGGATTACTTCAA
GGCCGTGGGGGAGGTGCTGTACGCGGACGTGAACAGGGACGGGGAGGGTG
TGGTGGAGTTTGCAAATAAAGATGACATGTTCGCTGCCAAGCGGAAGCTC
GATGGCACGGTTTTCAAGAACCCTTTTGACTCTCGCGAGATCCGGGTCAG
GTTGCCCAAGGGGAGCACTCTCCGATCCTCCTCCCGCAGCAAGAGCCGGA
GCCACAGTCGATCGCGCTCCCCCCCTTCCTCCCGCCGTCGCTCCCGCTCA
CCCCTCTCTCGATCACGATCTCCGCCTTCCAAGAAAAAGGGGGGAAGGGG
CACAGACGACGAGGAGGAGGGAAGAGGGGGGGAGGGAAAGAAGGCCGGGA
GGAAGATGAGCGAGGCGTCGGCGGGGGATAGCAGCCCGGAGAGGAGCCCG
AGGAAGGGGAAGAAAGAGGAGGAGGAGGAGGAGGGAGGGCCCAGGGATGA
GATTTAAATGTCCTGTCGCATCTACGTTGGCAATTTGCCTATGGACGTTC
GAGAGCGAGAGCTTGACGATCTTTTTTACAAGTACGGGCGCATCCGTGGC
ATTGACATTAAACGGCCTAATCGCCCCCCCGCCTATGCCTTCGTCGCTTT
CGAGGATCCTCGGGACGCTAAGGATGCTGTCTACTACCGAGACAATTACG
ACTTTGACGGGGGCCGTATCCGCGTGGAGCTGGCTAATGAGGCCCCTCGT
CGACGGGATGGAGGCTTCGGCGGTGGGCGTGGTGGAGGGCGCTCTCGCAC
TGACTTCCGGCTGGAGGTGACGGATCTCCCCGACAGGACATCTTGGCAAG
ACCTCAAGGATTACTTCAAGGCCGTGGGGGAGGTGCTGTACGCGGACGTG
AACAGGGACGGGGAGGGTGTGGTGGAGTTTGCAAATAAAGATGACATGTT
CGCTGCCAAGCGGAAGCTCGATGGCACGGTTTTCAAGAACCCTTTTGACT
CTCGCGAGATCCGGGTCAGGTTGCCCAAGGGGAGCACTCTCCGATCCTCC
TCCCGCAGCAAGAGCCGGAGCCACAGTCGATCGCGCTCCCCCCCTTCCTC
CCGCCGTCGCTCCCGCTCACCCCTCTCTCGATCACGATCTCCGCCTTCCA
AGAAAAAGGGGGGAAGGGGCACAGACGACGAGGAGGAGGGAAGAGGGGGG
GAGGGAAAGAAGGCCGGGAGGAAGATGAGCGAGGCGTCGGCGGGGGATAG
CAGCCCGGAGAGGAGCCCGAGGAAGGGGAAGAAAGAGGAGGAGGAGGAGG
AGGGAGGGCCCAGGGATGAGATTTAAATGTCCTGTCGCATCTACGTTGGC
AATTTGCCTATGGACGTTCGAGAGCGAGAGCTTGACGATCTTTTTTACAA
GTACGGGCGCATCCGTGGCATTGACATTAAACGGCCTAATCGCCCCCCCG
CCTATGCCTTCGTCGCTTTCGAGGATCCTCGGGACGCTAAGGATGCTGTC
TACTACCGAGACAATTACGACTTTGACGGGGGCCGTATCCGCGTGGAGCT
GGCTAATGAGGCCCCTCGTCGACGGGATGGAGGCTTCGGCGGTGGGCGTG
GTGGAGGGCGCTCTCGCACTGACTTCCGGCTGGAGGTGACGGATCTCCCC
GACAGGACATCTTGGCAAGACCTCAAGGATTACTTCAAGGCCGTGGGGGA
GGTGCTGTACGCGGACGTGAACAGGGACGGGGAGGGTGTGGTGGAGTTTG
CAAATAAAGATGACATGTTCGCTGCCAAGCGGAAGCTCGATGGCACGGTT
TTCAAGAACCCTTTTGACTCTCGCGAGATCCGGGTCAGGTTGCCCAAGGG
GAGCACTCTCCGATCCTCCTCCCGCAGCAAGAGCCGGAGCCACAGTCGAT
CGCGCTCCCCCCCTTCCTCCCGCCGTCGCTCCCGCTCACCCCTCTCTCGA
TCACGATCTCCGCCTTCCAAGAAAAAGGGGGGAAGGGGCACAGACGACGA
GGAGGAGGGAAGAGGGGGGGAGGGAAAGAAGGCCGGGAGGAAGATGAGCG
AGGCGTCGGCGGGGGATAGCAGCCCGGAGAGGAGCCCGAGGAAGGGGAAG
AAAGAGGAGGAGGAGGAGGAGGGAGGGCCCAGGGATGAGATTTAAATGTC
CTGTCGCATCTACGTTGGCAATTTGCCTATGGACGTTCGAGAGCGAGAGC
TTGACGATCTTTTTTACAAGTACGGGCGCATCCGTGGCATTGACATTAAA
CGGCCTAATCGCCCCCCCGCCTATGCCTTCGTCGCTTTCGAGGATCCTCG
GGACGCTAAGGATGCTGTCTACTACCGAGACAATTACGACTTTGACGGGG
GCCGTATCCGCGTGGAGCTGGCTAATGAGGCCCCTCGTCGACGGGATGGA
GGCTTCGGCGGTGGGCGTGGTGGAGGGCGCTCTCGCACTGACTTCCGGCT
GGAGGTGACGGATCTCCCCGACAGGACATCTTGGCAAGACCTCAAGGATT
ACTTCAAGGCCGTGGGGGAGGTGCTGTACGCGGACGTGAACAGGGACGGG
GAGGGTGTGGTGGAGTTTGCAAATAAAGATGACATGTTCGCTGCCAAGCG
GAAGCTCGATGGCACGGTTTTCAAGAACCCTTTTGACTCTCGCGAGATCC
GGGTCAGGTTGCCCAAGGGGAGCACTCTCCGATCCTCCTCCCGCAGCAAG
AGCCGGAGCCACAGTCGATCGCGCTCCCCCCCTTCCTCCCGCCGTCGCTC
CCGCTCACCCCTCTCTCGATCACGATCTCCGCCTTCCAAGAAAAAGGGGG
GAAGGGGCACAGACGACGAGGAGGAGGGAAGAGGGGGGGAGGGAAAGAAG
GCCGGGAGGAAGATGAGCGAGGCGTCGGCGGGGGATAGCAGCCCGGAGAG
GAGCCCGAGGAAGGGGAAGAAAGAGGAGGAGGAGGAGGAGGGAGGGCCCA
GGGATGAGATTTAA back to top
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