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Properties
| Property Name | Value |
|---|
| TranscriptId | 598848 |
| Track | FilteredModels2 |
| ProteinId | 598762 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_19 | supercontig | scaffold_19:517318..519414 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7434 ID=mRNA_7434|Name=jgi.p|Nanoce1779_2|598762|organism=Nannochloropsis oceanica|type=mRNA|length=943bp
AAATAACAGTTGAATGTCCAGCGGTATCAGCAGCCGTGGCGCCCGCAAGG
GCGGTGGGGGGAGCGGGGGAGGAGGCAAGAAGGAAATGGACCCTGCAGCA
CTTTCCCTGAAGGCCTCCAACATAAAGGCAGCCGAGACGCTGATTGCCGA
GGGAATGCCTGAGCGCATCTTGGAGCTGCACAAGATGCACGAGTCCCTCC
GTGCGGCCCGTCATGCGTCGGAAGCAGCGACAGCCGCCGCCCAAGAAGAA
AAAAAGGAAGAAATAGAAGATGGCAAAGGCGTGTTACCTACCTCCCTCCC
TTCCCTTCCAACCTCCTCGTCCTCCCCTTCCGTCTCAACCGGCACCGGGG
AAGGCGGGAAAGAGGGCGGGAAGGAGAAGGATGGGATTGTCCACGTCAAC
CCGGAAGTTTTCGCGCTCTTTCAGCGGGTGAAGGGGCTGGTGCTGCGGCT
GGTGGAGGACCTAGGAGTGCTTAAGCTCTTCGTCCGCCTGGCCTCCCCCG
CCATTGCCGACGGTTCCTTCAACAGTTCCGTACAAGAAGACGTCCTCGAG
GTCATCTCCTCTTCCCGTAGCGCCGGCCTGATGGTCCTCCAGCACATCTG
CAAATACTTCTTGGAAAGGGCGCATTACGTGGTGAAGAGCAAAAGGTACC
CCCTGGTGTCGGATTTTCGCAAGGCCGTGGAGCAGATGGACAAACAGCAG
ATACTGTCCCTGTCAGAGAGTGTGATGGGCATCCGCAATTCTTACCTCCT
CATCCACGACAAAATCACTAAAAACCAAGACCGGCTGAAGCAAGCGTCCA
AGCCCGAGAGACACTCTTCCCACATGGTGTGCTAGAGACGGAGGGAGAGA
GAGAGGGACGGGAGGGAGGGAGGGAGGGAGGGAGAGGGAAGGAGGAGCGA
AAGTAAGTGGTATGTACATGATACGTACGTGCGTGTATGTGGC back to topprotein sequence of jgi.p|Nanoce1779_2|598762 >mRNA_7434-protein ID=mRNA_7434-protein|Name=jgi.p|Nanoce1779_2|598762|organism=Nannochloropsis oceanica|type=polypeptide|length=274bp
MSSGISSRGARKGGGGSGGGGKKEMDPAALSLKASNIKAAETLIAEGMPE
RILELHKMHESLRAARHASEAATAAAQEEKKEEIEDGKGVLPTSLPSLPT
SSSSPSVSTGTGEGGKEGGKEKDGIVHVNPEVFALFQRVKGLVLRLVEDL
GVLKLFVRLASPAIADGSFNSSVQEDVLEVISSSRSAGLMVLQHICKYFL
ERAHYVVKSKRYPLVSDFRKAVEQMDKQQILSLSESVMGIRNSYLLIHDK
ITKNQDRLKQASKPERHSSHMVC* back to topmRNA from alignment at scaffold_19:517318..519414- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7434 ID=mRNA_7434|Name=jgi.p|Nanoce1779_2|598762|organism=Nannochloropsis oceanica|type=mRNA|length=2097bp|location=Sequence derived from alignment at scaffold_19:517318..519414- (Nannochloropsis oceanica)
AAATAACAGTTGAATGTCCAGCGGTATCAGCAGCCGTGGCGCCCGCAAGG
GCGGTGGGGGGAGCGGGGGAGGAGGCAAGAAGGAAATGGACCCTGCAGCA
CTTTCCCTGAAGGTCAGAGACAAGGAAGGAGGGAGGGAGGGAGGGAGGGA
GGGGTGAAGGGACAACGTATCTCTTTTTCAATTTTGACGATACGCGTGAT
ATGCTTGCTTGTCCGCATCTCTACGCCTCGTAAGTCTCAGCCCATGCCAA
AAACCCCACCCACCCACCCCTGCTCTCTTTCCTCCTTTCCTTCCTTCCCT
CCCTCCCTCCTTGCCCTCCCTTCAGGCCTCCAACATAAAGGCAGCCGAGA
CGCTGATTGCCGAGGGAATGCCTGAGCGCATCTTGGAGCTGCACAAGATG
CACGAGGTGAGGGCGGGGAGGGATGGAAGGACGGACGGGGAGAGCCTGCT
CGTTCCTCGTGTGTCTTTTGTCTTCCTCCTTCCCTCTGCATTCACTCATA
CACAAGCCACTCTCTCCTCCCCTGTCTAGTCCCTCCGTGCGGCCCGTCAT
GCGTCGGAAGCAGCGACAGCCGCCGCCCAAGAAGAAAAAAAGGAAGAAAT
AGAAGATGGCAAAGGCGTGTTACCTACCTCCCTCCCTTCCCTTCCAACCT
CCTCGTCCTCCCCTTCCGTCTCAACCGGCACCGGGGAAGGCGGGAAAGAG
GGCGGGAAGGAGAAGGATGGGATTGTCCACGTCAACCCGGAAGTTTTCGC
GCTCTTTCAGCGGGTGAAGGGGCTGGTGCTGCGGCTGGTGGAGGACCTAG
GAGTGCTTAAGTGAGGGCGGGAGGGAACGAGGGCGGGCGGGCGGGCGGGC
GGGCGGGAGAGAGGGAGGGAGAGAGGGAGAGAGAAGCCATGTTTTTGCTC
CTTTAGAGCCGTAGTATCAAATACAGGCTTTGAGATTCAAATCTCACTCA
GTTTATCTGCTTGCGTCCTCTGCCCTCCCTCCCTCCCTACATCCCAGGCT
CTTCGTCCGCCTGGCCTCCCCCGCCATTGCCGACGGTTCCTTCAACAGTT
CCGTACAAGAAGACGTCCTCGAGGTAGGCTCTTCCTCCCTCCTTCCCTCC
CCCCCTCCTTCCATTCTTCTCATTCCTCCGACCACCCATCGACCCCCCAC
CTCCCTCCCTCTCTCCCTCCCTCCCGCCCTGCCTGTCCAGGTCATCTCCT
CTTCCCGTAGCGCCGGCCTGATGGTCCTCCAGCACATCTGCAAATACTTC
TTGGAAAGGGCGCATTACGTGGTGAAGGTGAGGGAGGGAGGGAGGGAGGG
GAGGGTGGGAGGGGAGGGTGGCTTGTGGGCGAGTAAAGGAACGTTGTGTC
GTTTTTATGGGCCGGGCGAAGTGGATATAACGGGACGAAGAGGGAGGGAG
GGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGACAG
CTTTGAAGCCCTGTTTTTACGCTTCTGTCTCCATTTTCGTTCCCGTGTCC
TTCAAAAGTCAATGTCTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCTCTCCCTCCCTTATTTCGTCGTTTGACCAGTACCCTCCCTCCCTCCCT
CCCTCCCTAGAGCAAAAGGTACCCCCTGGTGTCGGATTTTCGCAAGGCCG
TGGAGCAGATGGACAAACAGCAGATACTGTCCCTGTCAGAGAGTGTGATG
GTAGGGAGGGAGGGAGGGAGGGAAGGTGAGGGGTGACACCTAACCTAATT
CTGATCCACAGCGTTCTGAAACACACTCATATTCGTCCCTCCCTTCCCTC
CTTCCCTCCTTCCCTCCTTCCCTCTGAAACTCTCTTGCTTGCTCCCCCCC
CTTTCACCCTCCCTCCGTCCCTCCCTCCCAGGGCATCCGCAATTCTTACC
TCCTCATCCACGACAAAATCACTAAAAACCAAGACCGGCTGAAGCAAGCG
TCCAAGCCCGAGAGACACTCTTCCCACATGGTGTGCTAGAGACGGAGGGA
GAGAGAGAGGGACGGGAGGGAGGGAGGGAGGGAGGGAGAGGGAAGGAGGA
GCGAAAGTAAGTGGTATGTACATGATACGTACGTGCGTGTATGTGGC back to topCoding sequence (CDS) from alignment at scaffold_19:517318..519414- >mRNA_7434 ID=mRNA_7434|Name=jgi.p|Nanoce1779_2|598762|organism=Nannochloropsis oceanica|type=CDS|length=5754bp|location=Sequence derived from alignment at scaffold_19:517318..519414- (Nannochloropsis oceanica)
GGCATCCGCAATTCTTACCTCCTCATCCACGACAAAATCACTAAAAACCA
AGACCGGCTGAAGCAAGCGTCCAAGCCCGAGAGACACTCTTCCCACATGG
TGTGCTAGAGCAAAAGGTACCCCCTGGTGTCGGATTTTCGCAAGGCCGTG
GAGCAGATGGACAAACAGCAGATACTGTCCCTGTCAGAGAGTGTGATGGT
CATCTCCTCTTCCCGTAGCGCCGGCCTGATGGTCCTCCAGCACATCTGCA
AATACTTCTTGGAAAGGGCGCATTACGTGGTGAAGGCTCTTCGTCCGCCT
GGCCTCCCCCGCCATTGCCGACGGTTCCTTCAACAGTTCCGTACAAGAAG
ACGTCCTCGAGTCCCTCCGTGCGGCCCGTCATGCGTCGGAAGCAGCGACA
GCCGCCGCCCAAGAAGAAAAAAAGGAAGAAATAGAAGATGGCAAAGGCGT
GTTACCTACCTCCCTCCCTTCCCTTCCAACCTCCTCGTCCTCCCCTTCCG
TCTCAACCGGCACCGGGGAAGGCGGGAAAGAGGGCGGGAAGGAGAAGGAT
GGGATTGTCCACGTCAACCCGGAAGTTTTCGCGCTCTTTCAGCGGGTGAA
GGGGCTGGTGCTGCGGCTGGTGGAGGACCTAGGAGTGCTTAAGCCTCCAA
CATAAAGGCAGCCGAGACGCTGATTGCCGAGGGAATGCCTGAGCGCATCT
TGGAGCTGCACAAGATGCACGAGATGTCCAGCGGTATCAGCAGCCGTGGC
GCCCGCAAGGGCGGTGGGGGGAGCGGGGGAGGAGGCAAGAAGGAAATGGA
CCCTGCAGCACTTTCCCTGAAGGGCATCCGCAATTCTTACCTCCTCATCC
ACGACAAAATCACTAAAAACCAAGACCGGCTGAAGCAAGCGTCCAAGCCC
GAGAGACACTCTTCCCACATGGTGTGCTAGAGCAAAAGGTACCCCCTGGT
GTCGGATTTTCGCAAGGCCGTGGAGCAGATGGACAAACAGCAGATACTGT
CCCTGTCAGAGAGTGTGATGGTCATCTCCTCTTCCCGTAGCGCCGGCCTG
ATGGTCCTCCAGCACATCTGCAAATACTTCTTGGAAAGGGCGCATTACGT
GGTGAAGGCTCTTCGTCCGCCTGGCCTCCCCCGCCATTGCCGACGGTTCC
TTCAACAGTTCCGTACAAGAAGACGTCCTCGAGTCCCTCCGTGCGGCCCG
TCATGCGTCGGAAGCAGCGACAGCCGCCGCCCAAGAAGAAAAAAAGGAAG
AAATAGAAGATGGCAAAGGCGTGTTACCTACCTCCCTCCCTTCCCTTCCA
ACCTCCTCGTCCTCCCCTTCCGTCTCAACCGGCACCGGGGAAGGCGGGAA
AGAGGGCGGGAAGGAGAAGGATGGGATTGTCCACGTCAACCCGGAAGTTT
TCGCGCTCTTTCAGCGGGTGAAGGGGCTGGTGCTGCGGCTGGTGGAGGAC
CTAGGAGTGCTTAAGCCTCCAACATAAAGGCAGCCGAGACGCTGATTGCC
GAGGGAATGCCTGAGCGCATCTTGGAGCTGCACAAGATGCACGAGATGTC
CAGCGGTATCAGCAGCCGTGGCGCCCGCAAGGGCGGTGGGGGGAGCGGGG
GAGGAGGCAAGAAGGAAATGGACCCTGCAGCACTTTCCCTGAAGGGCATC
CGCAATTCTTACCTCCTCATCCACGACAAAATCACTAAAAACCAAGACCG
GCTGAAGCAAGCGTCCAAGCCCGAGAGACACTCTTCCCACATGGTGTGCT
AGAGCAAAAGGTACCCCCTGGTGTCGGATTTTCGCAAGGCCGTGGAGCAG
ATGGACAAACAGCAGATACTGTCCCTGTCAGAGAGTGTGATGGTCATCTC
CTCTTCCCGTAGCGCCGGCCTGATGGTCCTCCAGCACATCTGCAAATACT
TCTTGGAAAGGGCGCATTACGTGGTGAAGGCTCTTCGTCCGCCTGGCCTC
CCCCGCCATTGCCGACGGTTCCTTCAACAGTTCCGTACAAGAAGACGTCC
TCGAGTCCCTCCGTGCGGCCCGTCATGCGTCGGAAGCAGCGACAGCCGCC
GCCCAAGAAGAAAAAAAGGAAGAAATAGAAGATGGCAAAGGCGTGTTACC
TACCTCCCTCCCTTCCCTTCCAACCTCCTCGTCCTCCCCTTCCGTCTCAA
CCGGCACCGGGGAAGGCGGGAAAGAGGGCGGGAAGGAGAAGGATGGGATT
GTCCACGTCAACCCGGAAGTTTTCGCGCTCTTTCAGCGGGTGAAGGGGCT
GGTGCTGCGGCTGGTGGAGGACCTAGGAGTGCTTAAGCCTCCAACATAAA
GGCAGCCGAGACGCTGATTGCCGAGGGAATGCCTGAGCGCATCTTGGAGC
TGCACAAGATGCACGAGATGTCCAGCGGTATCAGCAGCCGTGGCGCCCGC
AAGGGCGGTGGGGGGAGCGGGGGAGGAGGCAAGAAGGAAATGGACCCTGC
AGCACTTTCCCTGAAGGGCATCCGCAATTCTTACCTCCTCATCCACGACA
AAATCACTAAAAACCAAGACCGGCTGAAGCAAGCGTCCAAGCCCGAGAGA
CACTCTTCCCACATGGTGTGCTAGAGCAAAAGGTACCCCCTGGTGTCGGA
TTTTCGCAAGGCCGTGGAGCAGATGGACAAACAGCAGATACTGTCCCTGT
CAGAGAGTGTGATGGTCATCTCCTCTTCCCGTAGCGCCGGCCTGATGGTC
CTCCAGCACATCTGCAAATACTTCTTGGAAAGGGCGCATTACGTGGTGAA
GGCTCTTCGTCCGCCTGGCCTCCCCCGCCATTGCCGACGGTTCCTTCAAC
AGTTCCGTACAAGAAGACGTCCTCGAGTCCCTCCGTGCGGCCCGTCATGC
GTCGGAAGCAGCGACAGCCGCCGCCCAAGAAGAAAAAAAGGAAGAAATAG
AAGATGGCAAAGGCGTGTTACCTACCTCCCTCCCTTCCCTTCCAACCTCC
TCGTCCTCCCCTTCCGTCTCAACCGGCACCGGGGAAGGCGGGAAAGAGGG
CGGGAAGGAGAAGGATGGGATTGTCCACGTCAACCCGGAAGTTTTCGCGC
TCTTTCAGCGGGTGAAGGGGCTGGTGCTGCGGCTGGTGGAGGACCTAGGA
GTGCTTAAGCCTCCAACATAAAGGCAGCCGAGACGCTGATTGCCGAGGGA
ATGCCTGAGCGCATCTTGGAGCTGCACAAGATGCACGAGATGTCCAGCGG
TATCAGCAGCCGTGGCGCCCGCAAGGGCGGTGGGGGGAGCGGGGGAGGAG
GCAAGAAGGAAATGGACCCTGCAGCACTTTCCCTGAAGGGCATCCGCAAT
TCTTACCTCCTCATCCACGACAAAATCACTAAAAACCAAGACCGGCTGAA
GCAAGCGTCCAAGCCCGAGAGACACTCTTCCCACATGGTGTGCTAGAGCA
AAAGGTACCCCCTGGTGTCGGATTTTCGCAAGGCCGTGGAGCAGATGGAC
AAACAGCAGATACTGTCCCTGTCAGAGAGTGTGATGGTCATCTCCTCTTC
CCGTAGCGCCGGCCTGATGGTCCTCCAGCACATCTGCAAATACTTCTTGG
AAAGGGCGCATTACGTGGTGAAGGCTCTTCGTCCGCCTGGCCTCCCCCGC
CATTGCCGACGGTTCCTTCAACAGTTCCGTACAAGAAGACGTCCTCGAGT
CCCTCCGTGCGGCCCGTCATGCGTCGGAAGCAGCGACAGCCGCCGCCCAA
GAAGAAAAAAAGGAAGAAATAGAAGATGGCAAAGGCGTGTTACCTACCTC
CCTCCCTTCCCTTCCAACCTCCTCGTCCTCCCCTTCCGTCTCAACCGGCA
CCGGGGAAGGCGGGAAAGAGGGCGGGAAGGAGAAGGATGGGATTGTCCAC
GTCAACCCGGAAGTTTTCGCGCTCTTTCAGCGGGTGAAGGGGCTGGTGCT
GCGGCTGGTGGAGGACCTAGGAGTGCTTAAGCCTCCAACATAAAGGCAGC
CGAGACGCTGATTGCCGAGGGAATGCCTGAGCGCATCTTGGAGCTGCACA
AGATGCACGAGATGTCCAGCGGTATCAGCAGCCGTGGCGCCCGCAAGGGC
GGTGGGGGGAGCGGGGGAGGAGGCAAGAAGGAAATGGACCCTGCAGCACT
TTCCCTGAAGGGCATCCGCAATTCTTACCTCCTCATCCACGACAAAATCA
CTAAAAACCAAGACCGGCTGAAGCAAGCGTCCAAGCCCGAGAGACACTCT
TCCCACATGGTGTGCTAGAGCAAAAGGTACCCCCTGGTGTCGGATTTTCG
CAAGGCCGTGGAGCAGATGGACAAACAGCAGATACTGTCCCTGTCAGAGA
GTGTGATGGTCATCTCCTCTTCCCGTAGCGCCGGCCTGATGGTCCTCCAG
CACATCTGCAAATACTTCTTGGAAAGGGCGCATTACGTGGTGAAGGCTCT
TCGTCCGCCTGGCCTCCCCCGCCATTGCCGACGGTTCCTTCAACAGTTCC
GTACAAGAAGACGTCCTCGAGTCCCTCCGTGCGGCCCGTCATGCGTCGGA
AGCAGCGACAGCCGCCGCCCAAGAAGAAAAAAAGGAAGAAATAGAAGATG
GCAAAGGCGTGTTACCTACCTCCCTCCCTTCCCTTCCAACCTCCTCGTCC
TCCCCTTCCGTCTCAACCGGCACCGGGGAAGGCGGGAAAGAGGGCGGGAA
GGAGAAGGATGGGATTGTCCACGTCAACCCGGAAGTTTTCGCGCTCTTTC
AGCGGGTGAAGGGGCTGGTGCTGCGGCTGGTGGAGGACCTAGGAGTGCTT
AAGCCTCCAACATAAAGGCAGCCGAGACGCTGATTGCCGAGGGAATGCCT
GAGCGCATCTTGGAGCTGCACAAGATGCACGAGATGTCCAGCGGTATCAG
CAGCCGTGGCGCCCGCAAGGGCGGTGGGGGGAGCGGGGGAGGAGGCAAGA
AGGAAATGGACCCTGCAGCACTTTCCCTGAAGGGCATCCGCAATTCTTAC
CTCCTCATCCACGACAAAATCACTAAAAACCAAGACCGGCTGAAGCAAGC
GTCCAAGCCCGAGAGACACTCTTCCCACATGGTGTGCTAGAGCAAAAGGT
ACCCCCTGGTGTCGGATTTTCGCAAGGCCGTGGAGCAGATGGACAAACAG
CAGATACTGTCCCTGTCAGAGAGTGTGATGGTCATCTCCTCTTCCCGTAG
CGCCGGCCTGATGGTCCTCCAGCACATCTGCAAATACTTCTTGGAAAGGG
CGCATTACGTGGTGAAGGCTCTTCGTCCGCCTGGCCTCCCCCGCCATTGC
CGACGGTTCCTTCAACAGTTCCGTACAAGAAGACGTCCTCGAGTCCCTCC
GTGCGGCCCGTCATGCGTCGGAAGCAGCGACAGCCGCCGCCCAAGAAGAA
AAAAAGGAAGAAATAGAAGATGGCAAAGGCGTGTTACCTACCTCCCTCCC
TTCCCTTCCAACCTCCTCGTCCTCCCCTTCCGTCTCAACCGGCACCGGGG
AAGGCGGGAAAGAGGGCGGGAAGGAGAAGGATGGGATTGTCCACGTCAAC
CCGGAAGTTTTCGCGCTCTTTCAGCGGGTGAAGGGGCTGGTGCTGCGGCT
GGTGGAGGACCTAGGAGTGCTTAAGCCTCCAACATAAAGGCAGCCGAGAC
GCTGATTGCCGAGGGAATGCCTGAGCGCATCTTGGAGCTGCACAAGATGC
ACGAGATGTCCAGCGGTATCAGCAGCCGTGGCGCCCGCAAGGGCGGTGGG
GGGAGCGGGGGAGGAGGCAAGAAGGAAATGGACCCTGCAGCACTTTCCCT
GAAG back to top
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