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Properties
| Property Name | Value |
|---|
| TranscriptId | 598833 |
| Track | FilteredModels2 |
| ProteinId | 598747 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_19 | supercontig | scaffold_19:510546..512880 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7431 ID=mRNA_7431|Name=jgi.p|Nanoce1779_2|598747|organism=Nannochloropsis oceanica|type=mRNA|length=1531bp
CCTCCCAAGGCAACAATGGCCCAGCAGCCCCGGCTCCAAGTCCCACCCCT
CTTATTGAGCCTCCCAGCCCTTTTGTCTATAATTGGGGGAACGACCGTTC
GAATCAGATCGTGGGGATGGACCAAAACCGCCTGCAGTGCAAGAGCGGTG
GGACAGACGTCGATATCTTTATATTGGACACTGGTTGTAGGCCGGATCAT
GACGAATTTATGGGGCGGGCCACAACCGAGAGTGTGACCATGGACAACGG
GAGCAAGCCTTACGGATCGGGGAGAGATGGCCACGGGCATGGCACGCACT
GTGCGGGGACGGCTGCAGGCATCAATGTAGGGGTCGCGCGCGATGCCACG
GTCCGGTGTGTCAAGGTGTTGTCGGACTCGGGCTCGGGGCAGCTGTCGCA
TGTGGTGGCCGGGTTGAACTATGTGGGGAGGTGGAAGCAGGCAAACCCCA
ACAGGATGGTCGTGGTTTCCCTTTCCCTCGGCGCAGGTTTCACGCAAACT
ATCAACAATGCCGTCGACACTCTCACGCGGCTGGGCATCCCAGCGGTGGT
TGCAGCAGGAAATTCCAACGTTGATGCCTCCCAAACCAGCCCAGCTTCCT
CAGTGGGTGCCATCACTGTCGGGGCCTCCGGAAAGACCGATCAAAAAGAA
TCCTTTAGCAACTGGGGCCAAGTTGTCGACATTTACGCCCCTGGCGGAGG
CATCTACTCCGCTACACCCGATAGCCGCAGCTCATACACGTATATGAGTG
GCACCTCCATGGCTACTCCCATGGTGGCTGGTGGCGTGGCATGTGTCCTG
GCAGGCGCCCCGGGCAGGAGCTGCACGAATGCTGCGTTGATAGCCAAGTT
GAGTAATCCCCGTGTGGTCATTGAGCAGGGGGGTGCACTCCAGAAGAGAG
CTCGTCCAGATAGGCCTTTGTTCTACCTGCCTCCGGATGCGAATGTGCAA
TGCCCATAGAAGAAAAAAGATGTCTGCACCTCTTGGGAGAGCAACAGAGA
AGAAAAAAGGATAGAGGAATGAAATGAATGAAGATACTTTGCAAAGAGAG
CGTGTTAAGCATGAGGCCTAGTGAATGGGAGGGTGGACAGGAATGGTTGA
ACGCGGGCAGTTCGAAACGTGGGGATGGAGGTGGATGGGTTTGAACGAGA
AATATTGCAGGACTGGGATGCAGGAAAGCCGAGAATGTAATAATCTGATG
CTATGATGTGATAGGAAGAATAGGCCAGGAGAGTATGATGGAAGTGAAAG
AGATGTTTACGACCGGATATATTGAATTGACGGCTTGATTAGGAGGAGAG
GAAACAGAACGACACAGACAACAGATGTATATGCCCCCGGTACGGGGGAG
ATACTTGCAGAGGGTAACTTGCAAGCCCAAATTGGCAAAAACTAATCCCG
TAAATGGTTTACACAAACACGACACATTACATGAGAAAGGAATGAAGTAA
TGGCACAAAGTAGGATAAAGAAGGCGCGATGCAATTAAAAAAAGAAGTGG
GACAGGAAAGAACAGAAGTTTCCAAGAATCT back to topprotein sequence of jgi.p|Nanoce1779_2|598747 >mRNA_7431-protein ID=mRNA_7431-protein|Name=jgi.p|Nanoce1779_2|598747|organism=Nannochloropsis oceanica|type=polypeptide|length=281bp
MDQNRLQCKSGGTDVDIFILDTGCRPDHDEFMGRATTESVTMDNGSKPYG
SGRDGHGHGTHCAGTAAGINVGVARDATVRCVKVLSDSGSGQLSHVVAGL
NYVGRWKQANPNRMVVVSLSLGAGFTQTINNAVDTLTRLGIPAVVAAGNS
NVDASQTSPASSVGAITVGASGKTDQKESFSNWGQVVDIYAPGGGIYSAT
PDSRSSYTYMSGTSMATPMVAGGVACVLAGAPGRSCTNAALIAKLSNPRV
VIEQGGALQKRARPDRPLFYLPPDANVQCP* back to topmRNA from alignment at scaffold_19:510546..512880- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7431 ID=mRNA_7431|Name=jgi.p|Nanoce1779_2|598747|organism=Nannochloropsis oceanica|type=mRNA|length=2335bp|location=Sequence derived from alignment at scaffold_19:510546..512880- (Nannochloropsis oceanica)
CCTCCCAAGGCAACAATGGCCCAGCAGCCCCGGCTCCAAGTCCCACCCCT
CTTATTGAGCCTCCCAGCCCTTTTGTCTATAATTGGGGGAACGACCGTTC
GAATCAGATCGTGGGGATGGACCAAAACCGCCTGCAGTGCAAGAGCGGTG
GGACAGACGTCGATATCTTTATATTGGACACTGGTAGGAAAGGAAGGAGG
GGAGTGAGGGAGAGAGGGAGGGAGGGAGGGAGGGAAGAGGGAAGGGGGGA
TGAGGACGAAAATATAAAGAGGGGAAGTGGGTAAATGACGGTACTGTTAG
AATATCACAACCGGCGACGAAAGAGGGCGTCGATAATTAAGCAGAACATG
AAGGGGGGGGTAGCCGTGGATCCTCCATTCCCCCCCTCAGCTTCACATGC
CCGAGATATGAGTAGATACACTTTCCCCGCTCTCTTATTTTGTCTCACTC
TTCTATCCTCCTTCTTTCTCTCTTTTTGTCCCGGACGCCTATAGGTTGTA
GGCCGGATCATGACGAATTTATGGGGCGGGCCACAACCGAGAGTGTGACC
ATGGACAACGGGAGCAAGCCTTACGGATCGGGGAGAGATGGCCACGGGCA
TGGCACGCACTGTGCGGGGACGGCTGCAGGCATCAATGTAGGGGTCGCGC
GCGATGCCACGGTCCGGTGTGTCAAGGTGTTGTCGGACTCGGGCTCGGGG
CAGCTGTCGCATGTGGTGGCCGGGTTGAACTATGTGGGGAGGTGGAAGCA
GGTAGGATGTATGTATGTACGAATGTATGTTTGTGTTTCCATGTCCATGC
ATCCGGGCGCGCAGCTGCGGCAGAGGGAGGAAAGCATGAAAGATAGATGG
CCGATGTGTTTGTTGTAGCACTTTTGGTCCCTTTTTCCCCATCTTCGATC
TTATTGCGACACTCTTTCGCCAATTATCTGGTTATTTATTCACGTGTCAT
GTTCTATAATCTGATCCGCTGTTCATCCTTACTAATATAATTTTTTCCAT
CTTTCCGTCTTTTTTTTCATCTGCAGGCAAACCCCAACAGGATGGTCGTG
GTTTCCCTTTCCCTCGGCGCAGGTTTCACGCAAACTATCAACAATGCCGT
CGACACTCTCACGCGGCTGGGCATCCCAGCGGTGGTTGCAGCAGGAAATT
CCAACGTTGATGCCTCCCAAACCAGCCCAGCTTCCTCAGTGGGTGCCATC
ACTGTCGGGGCCTCCGGAAAGACCGATCAAAAAGAATGTAAGTTAGGGTT
CTTAAATTCTACGTTCCCATGGTGGTCAGTGGTTTGCTCTCAATATAGAG
CTGGTCGATAAACGCGTCAAATTTATGGCTTCAACGCCTGTATAAAGTAG
GGCAGGGATCTATTAGTGTATGCGTTACAATTACCGCACTTATCAACCAT
CAAATCGACAATTTACTTGATCATCCATAATCCCCTTCTTTCCATCTACT
CTCAGCCTTTAGCAACTGGGGCCAAGTTGTCGACATTTACGCCCCTGGCG
GAGGCATCTACTCCGCTACACCCGATAGCCGCAGCTCATACACGTATATG
AGTGGCACCTCCATGGCTACTCCCATGGTGGCTGGTGGCGTGGCATGTGT
CCTGGCAGGCGCCCCGGGCAGGAGCTGCACGAATGCTGCGTTGATAGCCA
AGTTGAGTAATCCCCGTGTGGTCATTGAGCAGGGGGGTGCACTCCAGAAG
AGAGCTCGTCCAGATAGGCCTTTGTTCTACCTGCCTCCGGATGCGAATGT
GCAATGCCCATAGAAGAAAAAAGATGTCTGCACCTCTTGGGAGAGCAACA
GAGAAGAAAAAAGGATAGAGGAATGAAATGAATGAAGATACTTTGCAAAG
AGAGCGTGTTAAGCATGAGGCCTAGTGAATGGGAGGGTGGACAGGAATGG
TTGAACGCGGGCAGTTCGAAACGTGGGGATGGAGGTGGATGGGTTTGAAC
GAGAAATATTGCAGGACTGGGATGCAGGAAAGCCGAGAATGTAATAATCT
GATGCTATGATGTGATAGGAAGAATAGGCCAGGAGAGTATGATGGAAGTG
AAAGAGATGTTTACGACCGGATATATTGAATTGACGGCTTGATTAGGAGG
AGAGGAAACAGAACGACACAGACAACAGATGTATATGCCCCCGGTACGGG
GGAGATACTTGCAGAGGGTAACTTGCAAGCCCAAATTGGCAAAAACTAAT
CCCGTAAATGGTTTACACAAACACGACACATTACATGAGAAAGGAATGAA
GTAATGGCACAAAGTAGGATAAAGAAGGCGCGATGCAATTAAAAAAAGAA
GTGGGACAGGAAAGAACAGAAGTTTCCAAGAATCT back to topCoding sequence (CDS) from alignment at scaffold_19:510546..512880- >mRNA_7431 ID=mRNA_7431|Name=jgi.p|Nanoce1779_2|598747|organism=Nannochloropsis oceanica|type=CDS|length=3372bp|location=Sequence derived from alignment at scaffold_19:510546..512880- (Nannochloropsis oceanica)
CCTTTAGCAACTGGGGCCAAGTTGTCGACATTTACGCCCCTGGCGGAGGC
ATCTACTCCGCTACACCCGATAGCCGCAGCTCATACACGTATATGAGTGG
CACCTCCATGGCTACTCCCATGGTGGCTGGTGGCGTGGCATGTGTCCTGG
CAGGCGCCCCGGGCAGGAGCTGCACGAATGCTGCGTTGATAGCCAAGTTG
AGTAATCCCCGTGTGGTCATTGAGCAGGGGGGTGCACTCCAGAAGAGAGC
TCGTCCAGATAGGCCTTTGTTCTACCTGCCTCCGGATGCGAATGTGCAAT
GCCCATAGGCAAACCCCAACAGGATGGTCGTGGTTTCCCTTTCCCTCGGC
GCAGGTTTCACGCAAACTATCAACAATGCCGTCGACACTCTCACGCGGCT
GGGCATCCCAGCGGTGGTTGCAGCAGGAAATTCCAACGTTGATGCCTCCC
AAACCAGCCCAGCTTCCTCAGTGGGTGCCATCACTGTCGGGGCCTCCGGA
AAGACCGATCAAAAAGAATGTTGTAGGCCGGATCATGACGAATTTATGGG
GCGGGCCACAACCGAGAGTGTGACCATGGACAACGGGAGCAAGCCTTACG
GATCGGGGAGAGATGGCCACGGGCATGGCACGCACTGTGCGGGGACGGCT
GCAGGCATCAATGTAGGGGTCGCGCGCGATGCCACGGTCCGGTGTGTCAA
GGTGTTGTCGGACTCGGGCTCGGGGCAGCTGTCGCATGTGGTGGCCGGGT
TGAACTATGTGGGGAGGTGGAAGCAGATGGACCAAAACCGCCTGCAGTGC
AAGAGCGGTGGGACAGACGTCGATATCTTTATATTGGACACTGCCTTTAG
CAACTGGGGCCAAGTTGTCGACATTTACGCCCCTGGCGGAGGCATCTACT
CCGCTACACCCGATAGCCGCAGCTCATACACGTATATGAGTGGCACCTCC
ATGGCTACTCCCATGGTGGCTGGTGGCGTGGCATGTGTCCTGGCAGGCGC
CCCGGGCAGGAGCTGCACGAATGCTGCGTTGATAGCCAAGTTGAGTAATC
CCCGTGTGGTCATTGAGCAGGGGGGTGCACTCCAGAAGAGAGCTCGTCCA
GATAGGCCTTTGTTCTACCTGCCTCCGGATGCGAATGTGCAATGCCCATA
GGCAAACCCCAACAGGATGGTCGTGGTTTCCCTTTCCCTCGGCGCAGGTT
TCACGCAAACTATCAACAATGCCGTCGACACTCTCACGCGGCTGGGCATC
CCAGCGGTGGTTGCAGCAGGAAATTCCAACGTTGATGCCTCCCAAACCAG
CCCAGCTTCCTCAGTGGGTGCCATCACTGTCGGGGCCTCCGGAAAGACCG
ATCAAAAAGAATGTTGTAGGCCGGATCATGACGAATTTATGGGGCGGGCC
ACAACCGAGAGTGTGACCATGGACAACGGGAGCAAGCCTTACGGATCGGG
GAGAGATGGCCACGGGCATGGCACGCACTGTGCGGGGACGGCTGCAGGCA
TCAATGTAGGGGTCGCGCGCGATGCCACGGTCCGGTGTGTCAAGGTGTTG
TCGGACTCGGGCTCGGGGCAGCTGTCGCATGTGGTGGCCGGGTTGAACTA
TGTGGGGAGGTGGAAGCAGATGGACCAAAACCGCCTGCAGTGCAAGAGCG
GTGGGACAGACGTCGATATCTTTATATTGGACACTGCCTTTAGCAACTGG
GGCCAAGTTGTCGACATTTACGCCCCTGGCGGAGGCATCTACTCCGCTAC
ACCCGATAGCCGCAGCTCATACACGTATATGAGTGGCACCTCCATGGCTA
CTCCCATGGTGGCTGGTGGCGTGGCATGTGTCCTGGCAGGCGCCCCGGGC
AGGAGCTGCACGAATGCTGCGTTGATAGCCAAGTTGAGTAATCCCCGTGT
GGTCATTGAGCAGGGGGGTGCACTCCAGAAGAGAGCTCGTCCAGATAGGC
CTTTGTTCTACCTGCCTCCGGATGCGAATGTGCAATGCCCATAGGCAAAC
CCCAACAGGATGGTCGTGGTTTCCCTTTCCCTCGGCGCAGGTTTCACGCA
AACTATCAACAATGCCGTCGACACTCTCACGCGGCTGGGCATCCCAGCGG
TGGTTGCAGCAGGAAATTCCAACGTTGATGCCTCCCAAACCAGCCCAGCT
TCCTCAGTGGGTGCCATCACTGTCGGGGCCTCCGGAAAGACCGATCAAAA
AGAATGTTGTAGGCCGGATCATGACGAATTTATGGGGCGGGCCACAACCG
AGAGTGTGACCATGGACAACGGGAGCAAGCCTTACGGATCGGGGAGAGAT
GGCCACGGGCATGGCACGCACTGTGCGGGGACGGCTGCAGGCATCAATGT
AGGGGTCGCGCGCGATGCCACGGTCCGGTGTGTCAAGGTGTTGTCGGACT
CGGGCTCGGGGCAGCTGTCGCATGTGGTGGCCGGGTTGAACTATGTGGGG
AGGTGGAAGCAGATGGACCAAAACCGCCTGCAGTGCAAGAGCGGTGGGAC
AGACGTCGATATCTTTATATTGGACACTGCCTTTAGCAACTGGGGCCAAG
TTGTCGACATTTACGCCCCTGGCGGAGGCATCTACTCCGCTACACCCGAT
AGCCGCAGCTCATACACGTATATGAGTGGCACCTCCATGGCTACTCCCAT
GGTGGCTGGTGGCGTGGCATGTGTCCTGGCAGGCGCCCCGGGCAGGAGCT
GCACGAATGCTGCGTTGATAGCCAAGTTGAGTAATCCCCGTGTGGTCATT
GAGCAGGGGGGTGCACTCCAGAAGAGAGCTCGTCCAGATAGGCCTTTGTT
CTACCTGCCTCCGGATGCGAATGTGCAATGCCCATAGGCAAACCCCAACA
GGATGGTCGTGGTTTCCCTTTCCCTCGGCGCAGGTTTCACGCAAACTATC
AACAATGCCGTCGACACTCTCACGCGGCTGGGCATCCCAGCGGTGGTTGC
AGCAGGAAATTCCAACGTTGATGCCTCCCAAACCAGCCCAGCTTCCTCAG
TGGGTGCCATCACTGTCGGGGCCTCCGGAAAGACCGATCAAAAAGAATGT
TGTAGGCCGGATCATGACGAATTTATGGGGCGGGCCACAACCGAGAGTGT
GACCATGGACAACGGGAGCAAGCCTTACGGATCGGGGAGAGATGGCCACG
GGCATGGCACGCACTGTGCGGGGACGGCTGCAGGCATCAATGTAGGGGTC
GCGCGCGATGCCACGGTCCGGTGTGTCAAGGTGTTGTCGGACTCGGGCTC
GGGGCAGCTGTCGCATGTGGTGGCCGGGTTGAACTATGTGGGGAGGTGGA
AGCAGATGGACCAAAACCGCCTGCAGTGCAAGAGCGGTGGGACAGACGTC
GATATCTTTATATTGGACACTG back to top
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