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Properties
| Property Name | Value |
|---|
| TranscriptId | 652440 |
| Track | FilteredModels2 |
| ProteinId | 652354 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_19 | supercontig | scaffold_19:463493..465602 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7417 ID=mRNA_7417|Name=jgi.p|Nanoce1779_2|652354|organism=Nannochloropsis oceanica|type=mRNA|length=1793bp
CGAGACGTACAGTATGTTGTAGGCGCTCTGCTGGTGTCCGTTCAGGCTTT
TGCCGCTTCTTGAGGACGGCCATGATTTTGTTGCTACTTTTGCTCCTGCT
CCTTCTGTTCTGACACCTTCTATTGCTCCTACTACTCCGATTGAGTGGCA
CTGGGTGCTACTACCGACACGCTTATTCTGGTTGTGGGTCAAAAATGGAC
AGATATCCGAGATGAAATGACCTCCCCACCCCCTTCAGCTTGCCAATCCC
GGCCCCTCCTTACAAGGTTTGTTCTCCCCGTCCCTCCACGTCCAGCCAAT
GGATATAGGCCCGAGTCCTGGTCCTCGCTAGTTGCTTGGCTTGTATGGTG
TGAGTGTGGATATGCGTACGCGTGAGAAGGGAGAATGATTATGGCCACTC
CAGCCAAGCCAAAAACTCGCCGCCTCGCTCACAAACGGCATTCGTTGCCA
GCATTTGTCTCACTATCACCACACCATATTTATAATTTTGTTCGAAGTCA
TGGGTGCCGTCTTGTCCTTCCTCCCGGAGCCCCTTGAAATGCTGGTGGAA
GAATGGTGGGCGTGGTCCTTGAGTCTTTTGCAGTCTCTGATTGTGCGAGG
CGTAAGCTTGGTCACAGGCAAAGGCGAGCTCGAGCGAATCTGCGGCGGAG
ACCAACGGCACTCTTCCACCATGAGCAAACGATTCCTGCGTTCCCTCCGT
TTCTCCTCCTCTTCCTCACACGTCACGTCCAACCCTGCCTCTCCCTCCCT
GCTTTTTCGTCCCATGCCTTTCGACATCCCCACGGTGCTTGCCGCGCTGG
TCAGACAGCATCACATAACACCGTCCCTGCGCCCTGTCCGTGAAAACTTG
ACCCAGTGCCTGGAGGCCCTTAACTACGCCAACACAGTAGCTGCTCACGT
CATCGCCTTGTCTAAAACCCCTTTTGATTACTCAAATGACGGGCATCTCC
GCCTTTTGGTGGCACTCTGGAAAGCTCTTAAGCCGGATGTGGCGCTTCCT
GCATTACCAGCAAAAGCAGCAGCAGCAGGAGCAGCAGCCACAACAATGAC
AGCGCCAGGAAAGGCAGCTGACCGTGCCTCTACCTCACGATGGAACGAAC
TCGGATTTCAGGGCAAGGACCCTGCGACCGATCTGCGAGGAATGGGATTG
CTAGGCCTCGTGCAACTCGTTTACTACGCCGAGTCCTACCCAGAGAAGGC
TCGGTCCACACTGCTGGAAAGCGAGCATCCCCGACGCTGGTTCCCGTGGG
CGGTGGCCGGTATTAATGTAAGTAGTTTTGTCTTGGCGTTGTTGGTGGAT
GACAGGGCGTTGGACGGGAGGTTGGTCGAGGAGAGGGAGGAGGGGAAGGG
GGGAAAGGGGGTGAGGGAGGGAGGGATAGGCAAGGAGGGGTCGGTGGAGG
AGAGAGGGAGGAAGGGAGGGAAGGGGGGAGGGATGAAGGTCGTGAATGAG
GTATATTGCCGGGTGTGGGAGGAGATGGGAAGGGCTTGGGTGGAGGCGGA
TGCGGAGAACGTGATGGCCTTCCCAAGGGTGTGGGGGGAGGTGAAGAGGA
GGGAGAGGAAAAAGTGGAGGATGAGGGGGGAGGACCTGCTGGGGGATTTG
ATGCAGTGGTGAAGGAAAGGAGGGAATTTAAGAAGGAGGGATGGGAGGGA
AGGAAGGAGGAAGAGAAGAGGATGAAGGAGATGATGAAGATGAAGAAGAA
GAAGAAGAATGATGATATGGCGACATAAGTCTAACGCATTATCTCTTGGT
TCCCTCGTCTTCTCATTTCCCCCCCTTACCTTATCTCATCCTT back to topprotein sequence of jgi.p|Nanoce1779_2|652354 >mRNA_7417-protein ID=mRNA_7417-protein|Name=jgi.p|Nanoce1779_2|652354|organism=Nannochloropsis oceanica|type=polypeptide|length=371bp
MGAVLSFLPEPLEMLVEEWWAWSLSLLQSLIVRGVSLVTGKGELERICGG
DQRHSSTMSKRFLRSLRFSSSSSHVTSNPASPSLLFRPMPFDIPTVLAAL
VRQHHITPSLRPVRENLTQCLEALNYANTVAAHVIALSKTPFDYSNDGHL
RLLVALWKALKPDVALPALPAKAAAAGAAATTMTAPGKAADRASTSRWNE
LGFQGKDPATDLRGMGLLGLVQLVYYAESYPEKARSTLLESEHPRRWFPW
AVAGINVSSFVLALLVDDRALDGRLVEEREEGKGGKGVREGGIGKEGSVE
ERGRKGGKGGGMKVVNEVYCRVWEEMGRAWVEADAENVMAFPRVWGEVKR
RERKKWRMRGEDLLGDLMQW* back to topmRNA from alignment at scaffold_19:463493..465602- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7417 ID=mRNA_7417|Name=jgi.p|Nanoce1779_2|652354|organism=Nannochloropsis oceanica|type=mRNA|length=2110bp|location=Sequence derived from alignment at scaffold_19:463493..465602- (Nannochloropsis oceanica)
CGAGACGTACAGTATGTTGTAGGCGCTCTGCTGGTGTCCGTTCAGGCTTT
TGCCGCTTCTTGAGGACGGCCATGATTTTGTTGCTACTTTTGCTCCTGCT
CCTTCTGTTCTGACACCTTCTATTGCTCCTACTACTCCGATTGAGTGGCA
CTGGGTGCTACTACCGACACGCTTATTCTGGTTGTGGGTCAAAAATGGAC
AGATATCCGAGATGAAATGACCTCCCCACCCCCTTCAGCTTGCCAATCCC
GGCCCCTCCTTACAAGGTTTGTTCTCCCCGTCCCTCCACGTCCAGCCAAT
GGATATAGGCCCGAGTCCTGGTCCTCGCTAGTTGCTTGGCTTGTATGGTG
TGAGTGTGGATATGCGTACGCGTGAGAAGGGAGAATGATTATGGCCACTC
CAGCCAAGCCAAAAACTCGCCGCCTCGCTCACAAACGGCATTCGTTGCCA
GCATTTGTCTCACTATCACCACACCATATTTATAATTTTGTTCGAAGTCA
TGGGTGCCGTCTTGTCCTTCCTCCCGGAGCCCCTTGAAATGCTGGTGGAA
GAATGGTGGGCGTGGTCCTTGAGTCTTTTGCAGTCTCTGATTGTGCGAGG
CGTAAGCTTGGTCACAGGTAAGAGGCAAGTCGAGGCAGCAAGAGGGTTGG
GGAGGAAGGCATGGAATAAGGGAGGAAGAGGTGTACGTGCTCCTCCATGT
ACACGTCCAGTCGTGCGGAGTATGGGTACTCCCCCTCTTTATCTACCCTT
CCAAGGCTCACCTACCCCACCCTAACCACAGGCAAAGGCGAGCTCGAGCG
AATCTGCGGCGGAGACCAACGGCACTCTTCCACCATGAGCAAACGATTCC
TGCGTTCCCTCCGTTTCTCCTCCTCTTCCTCACACGTCACGTCCAACCCT
GCCTCTCCCTCCCTGCTTTTTCGTCCCATGCCTTTCGACATCCCCACGGT
GCTTGCCGCGCTGGTCAGACAGCATCACATAACACCGTCCCTGCGCCCTG
TCCGTGAAAACTTGACCCAGGTACGTGCTACATATCATTTCTACAGCCAG
TCATCGTCATCTCTGCTGCTGCTACTTCGTCTGCTAGGTCCTGGTATGCA
TGCATGCCTCCTTCCACATTCATCCACCTCTGTCCCCTTTTCCTTCATCT
CCTCTCTCCCTTCCTCCCTCTAGTGCCTGGAGGCCCTTAACTACGCCAAC
ACAGTAGCTGCTCACGTCATCGCCTTGTCTAAAACCCCTTTTGATTACTC
AAATGACGGGCATCTCCGCCTTTTGGTGGCACTCTGGAAAGCTCTTAAGC
CGGATGTGGCGCTTCCTGCATTACCAGCAAAAGCAGCAGCAGCAGGAGCA
GCAGCCACAACAATGACAGCGCCAGGAAAGGCAGCTGACCGTGCCTCTAC
CTCACGATGGAACGAACTCGGATTTCAGGGCAAGGACCCTGCGACCGATC
TGCGAGGAATGGGATTGCTAGGCCTCGTGCAACTCGTTTACTACGCCGAG
TCCTACCCAGAGAAGGCTCGGTCCACACTGCTGGAAAGCGAGCATCCCCG
ACGCTGGTTCCCGTGGGCGGTGGCCGGTATTAATGTAAGTAGTTTTGTCT
TGGCGTTGTTGGTGGATGACAGGGCGTTGGACGGGAGGTTGGTCGAGGAG
AGGGAGGAGGGGAAGGGGGGAAAGGGGGTGAGGGAGGGAGGGATAGGCAA
GGAGGGGTCGGTGGAGGAGAGAGGGAGGAAGGGAGGGAAGGGGGGAGGGA
TGAAGGTCGTGAATGAGGTATATTGCCGGGTGTGGGAGGAGATGGGAAGG
GCTTGGGTGGAGGCGGATGCGGAGAACGTGATGGCCTTCCCAAGGGTGTG
GGGGGAGGTGAAGAGGAGGGAGAGGAAAAAGTGGAGGATGAGGGGGGAGG
ACCTGCTGGGGGATTTGATGCAGTGGTGAAGGAAAGGAGGGAATTTAAGA
AGGAGGGATGGGAGGGAAGGAAGGAGGAAGAGAAGAGGATGAAGGAGATG
ATGAAGATGAAGAAGAAGAAGAAGAATGATGATATGGCGACATAAGTCTA
ACGCATTATCTCTTGGTTCCCTCGTCTTCTCATTTCCCCCCCTTACCTTA
TCTCATCCTT back to topCoding sequence (CDS) from alignment at scaffold_19:463493..465602- >mRNA_7417 ID=mRNA_7417|Name=jgi.p|Nanoce1779_2|652354|organism=Nannochloropsis oceanica|type=CDS|length=3339bp|location=Sequence derived from alignment at scaffold_19:463493..465602- (Nannochloropsis oceanica)
TGCCTGGAGGCCCTTAACTACGCCAACACAGTAGCTGCTCACGTCATCGC
CTTGTCTAAAACCCCTTTTGATTACTCAAATGACGGGCATCTCCGCCTTT
TGGTGGCACTCTGGAAAGCTCTTAAGCCGGATGTGGCGCTTCCTGCATTA
CCAGCAAAAGCAGCAGCAGCAGGAGCAGCAGCCACAACAATGACAGCGCC
AGGAAAGGCAGCTGACCGTGCCTCTACCTCACGATGGAACGAACTCGGAT
TTCAGGGCAAGGACCCTGCGACCGATCTGCGAGGAATGGGATTGCTAGGC
CTCGTGCAACTCGTTTACTACGCCGAGTCCTACCCAGAGAAGGCTCGGTC
CACACTGCTGGAAAGCGAGCATCCCCGACGCTGGTTCCCGTGGGCGGTGG
CCGGTATTAATGTAAGTAGTTTTGTCTTGGCGTTGTTGGTGGATGACAGG
GCGTTGGACGGGAGGTTGGTCGAGGAGAGGGAGGAGGGGAAGGGGGGAAA
GGGGGTGAGGGAGGGAGGGATAGGCAAGGAGGGGTCGGTGGAGGAGAGAG
GGAGGAAGGGAGGGAAGGGGGGAGGGATGAAGGTCGTGAATGAGGTATAT
TGCCGGGTGTGGGAGGAGATGGGAAGGGCTTGGGTGGAGGCGGATGCGGA
GAACGTGATGGCCTTCCCAAGGGTGTGGGGGGAGGTGAAGAGGAGGGAGA
GGAAAAAGTGGAGGATGAGGGGGGAGGACCTGCTGGGGGATTTGATGCAG
TGGTGAGCAAAGGCGAGCTCGAGCGAATCTGCGGCGGAGACCAACGGCAC
TCTTCCACCATGAGCAAACGATTCCTGCGTTCCCTCCGTTTCTCCTCCTC
TTCCTCACACGTCACGTCCAACCCTGCCTCTCCCTCCCTGCTTTTTCGTC
CCATGCCTTTCGACATCCCCACGGTGCTTGCCGCGCTGGTCAGACAGCAT
CACATAACACCGTCCCTGCGCCCTGTCCGTGAAAACTTGACCCAGATGGG
TGCCGTCTTGTCCTTCCTCCCGGAGCCCCTTGAAATGCTGGTGGAAGAAT
GGTGGGCGTGGTCCTTGAGTCTTTTGCAGTCTCTGATTGTGCGAGGCGTA
AGCTTGGTCACAGTGCCTGGAGGCCCTTAACTACGCCAACACAGTAGCTG
CTCACGTCATCGCCTTGTCTAAAACCCCTTTTGATTACTCAAATGACGGG
CATCTCCGCCTTTTGGTGGCACTCTGGAAAGCTCTTAAGCCGGATGTGGC
GCTTCCTGCATTACCAGCAAAAGCAGCAGCAGCAGGAGCAGCAGCCACAA
CAATGACAGCGCCAGGAAAGGCAGCTGACCGTGCCTCTACCTCACGATGG
AACGAACTCGGATTTCAGGGCAAGGACCCTGCGACCGATCTGCGAGGAAT
GGGATTGCTAGGCCTCGTGCAACTCGTTTACTACGCCGAGTCCTACCCAG
AGAAGGCTCGGTCCACACTGCTGGAAAGCGAGCATCCCCGACGCTGGTTC
CCGTGGGCGGTGGCCGGTATTAATGTAAGTAGTTTTGTCTTGGCGTTGTT
GGTGGATGACAGGGCGTTGGACGGGAGGTTGGTCGAGGAGAGGGAGGAGG
GGAAGGGGGGAAAGGGGGTGAGGGAGGGAGGGATAGGCAAGGAGGGGTCG
GTGGAGGAGAGAGGGAGGAAGGGAGGGAAGGGGGGAGGGATGAAGGTCGT
GAATGAGGTATATTGCCGGGTGTGGGAGGAGATGGGAAGGGCTTGGGTGG
AGGCGGATGCGGAGAACGTGATGGCCTTCCCAAGGGTGTGGGGGGAGGTG
AAGAGGAGGGAGAGGAAAAAGTGGAGGATGAGGGGGGAGGACCTGCTGGG
GGATTTGATGCAGTGGTGAGCAAAGGCGAGCTCGAGCGAATCTGCGGCGG
AGACCAACGGCACTCTTCCACCATGAGCAAACGATTCCTGCGTTCCCTCC
GTTTCTCCTCCTCTTCCTCACACGTCACGTCCAACCCTGCCTCTCCCTCC
CTGCTTTTTCGTCCCATGCCTTTCGACATCCCCACGGTGCTTGCCGCGCT
GGTCAGACAGCATCACATAACACCGTCCCTGCGCCCTGTCCGTGAAAACT
TGACCCAGATGGGTGCCGTCTTGTCCTTCCTCCCGGAGCCCCTTGAAATG
CTGGTGGAAGAATGGTGGGCGTGGTCCTTGAGTCTTTTGCAGTCTCTGAT
TGTGCGAGGCGTAAGCTTGGTCACAGTGCCTGGAGGCCCTTAACTACGCC
AACACAGTAGCTGCTCACGTCATCGCCTTGTCTAAAACCCCTTTTGATTA
CTCAAATGACGGGCATCTCCGCCTTTTGGTGGCACTCTGGAAAGCTCTTA
AGCCGGATGTGGCGCTTCCTGCATTACCAGCAAAAGCAGCAGCAGCAGGA
GCAGCAGCCACAACAATGACAGCGCCAGGAAAGGCAGCTGACCGTGCCTC
TACCTCACGATGGAACGAACTCGGATTTCAGGGCAAGGACCCTGCGACCG
ATCTGCGAGGAATGGGATTGCTAGGCCTCGTGCAACTCGTTTACTACGCC
GAGTCCTACCCAGAGAAGGCTCGGTCCACACTGCTGGAAAGCGAGCATCC
CCGACGCTGGTTCCCGTGGGCGGTGGCCGGTATTAATGTAAGTAGTTTTG
TCTTGGCGTTGTTGGTGGATGACAGGGCGTTGGACGGGAGGTTGGTCGAG
GAGAGGGAGGAGGGGAAGGGGGGAAAGGGGGTGAGGGAGGGAGGGATAGG
CAAGGAGGGGTCGGTGGAGGAGAGAGGGAGGAAGGGAGGGAAGGGGGGAG
GGATGAAGGTCGTGAATGAGGTATATTGCCGGGTGTGGGAGGAGATGGGA
AGGGCTTGGGTGGAGGCGGATGCGGAGAACGTGATGGCCTTCCCAAGGGT
GTGGGGGGAGGTGAAGAGGAGGGAGAGGAAAAAGTGGAGGATGAGGGGGG
AGGACCTGCTGGGGGATTTGATGCAGTGGTGAGCAAAGGCGAGCTCGAGC
GAATCTGCGGCGGAGACCAACGGCACTCTTCCACCATGAGCAAACGATTC
CTGCGTTCCCTCCGTTTCTCCTCCTCTTCCTCACACGTCACGTCCAACCC
TGCCTCTCCCTCCCTGCTTTTTCGTCCCATGCCTTTCGACATCCCCACGG
TGCTTGCCGCGCTGGTCAGACAGCATCACATAACACCGTCCCTGCGCCCT
GTCCGTGAAAACTTGACCCAGATGGGTGCCGTCTTGTCCTTCCTCCCGGA
GCCCCTTGAAATGCTGGTGGAAGAATGGTGGGCGTGGTCCTTGAGTCTTT
TGCAGTCTCTGATTGTGCGAGGCGTAAGCTTGGTCACAG back to top
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