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Properties
| Property Name | Value |
|---|
| TranscriptId | 652434 |
| Track | FilteredModels2 |
| ProteinId | 652348 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_19 | supercontig | scaffold_19:457843..459315 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7414 ID=mRNA_7414|Name=jgi.p|Nanoce1779_2|652348|organism=Nannochloropsis oceanica|type=mRNA|length=1473bp
CTGCAAGTCGCTTGGTGACTTTTTGGACAGTGTCGTCTAGGGTGAAATTA
TAGAACTTGTCGTGACTGATCCCATTGGGAGAAGCGACGACAACCTCCCC
ACCTGCAAAGCGAAGCTATTTAATTAAAATGCAGTGTCGGCCAGCTCAGG
GGTGCAGTATTACTGAATCTATACATGGTAGTTAGGACAAAGGCAGAAGC
ATGCTGCCGCACGCTATCACAGCACGTCTCAGTGTCCCGGCCAAACGATT
CAGCGATGCAGCGTCACGGCGGTCACACGCTTTTTCCCCACTACCTTACG
ATCACCACAAATTGTTACAGGCAGCACCATGCTTCTTCTCCGTAGCGGCA
CCAGGAGCAGCAGCAGCGCCCGGACTGTAAATTCTCGATTCTTCCGGCTT
CCTGCAGCCCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACGAAACAT
AGTACTGATGCAACGGAAGCCCTGTACGAGTACCCACAAGAACAGCAGCG
CCACCTGCTTCCTTTCCTCCCTCCCTTGTACCTATTCCTCTACTCTACGC
GGTATCTCCTTTTCCTCCTCCTCCTCCTTCCCCTCCTCCTCTTCCTCCCC
CTCCTCCGTAACCTTTTCCACATCATCCTTCTCCGATATGGGCAATAATG
CCTTCCCTACCAATCAGAGGAGTGACCCTGACTTCGTCGTCTTTGGCGAG
AACTGCATGCTCAAGTTTCGCCTGACCACCTACCAACAACCCGGGGGGGG
GGTGGGCGGTGGTGGTGGTGGCGCTCCACCTGGAGGAGGAGGCGGAGGAG
GAGGCACTCTTAACTACAAGAACAATGCGCGGTTGCTCGTAGAATTTACG
AAGAAGGGCCCAAGTGGTGCGTATGAATGGAAGGGGACAAAAAGGCTCTC
CCTGACGGCAGAGGAGATCGGGCTTATGCTTGACAGTGGCCCGACAGAAG
AGCTCATATTCCGTCGTTCAGGGGGCGGAGGAGGAGGGGGAGGGGGAGGG
ATGCCGATGCCACCGAGGGAGATAAAGATCATCCCCACATCGACGGGGGA
TTGGATCTTCCATTTCTCGATGGAGGCGGAGGAGATGTTCGAGGTGACTG
TGACGAGGGGAAGGAAGGCGATTTTGAAACGATTAATACAGATGAGCCTG
CCTGCTATTTTTGGTTGGGGAGGAGGAGGAGGAGGAGGGGGAGCGGGAGG
AGGAACAGCAGCAGCGCCTCTAGGAGGAGGATTAGGAGGAGGAGGAGGGA
TGGGTAGGGGGGGAGGGATAGGGGTTGCAGGGATAGGAGGTGGAGGGATG
GGAGGAGGGGGTGAGAGGGGAGGAGGAATGACGCCTTTTTAGAGTGGAGG
GGAGGGAGGAAAGGAATATCTATACGAGTATGTGTCATTTATAATATATA
TTTGTATAAAATTAGGGTCGGAAAGATGAAGGCGTATGGGTGGGCGAACG
AGCCGAGGAGAGGGAGTCGAGAG back to topprotein sequence of jgi.p|Nanoce1779_2|652348 >mRNA_7414-protein ID=mRNA_7414-protein|Name=jgi.p|Nanoce1779_2|652348|organism=Nannochloropsis oceanica|type=polypeptide|length=338bp
MLLLRSGTRSSSSARTVNSRFFRLPAAQQQQQQQQQQQRNIVLMQRKPCT
STHKNSSATCFLSSLPCTYSSTLRGISFSSSSSFPSSSSSPSSVTFSTSS
FSDMGNNAFPTNQRSDPDFVVFGENCMLKFRLTTYQQPGGGVGGGGGGAP
PGGGGGGGGTLNYKNNARLLVEFTKKGPSGAYEWKGTKRLSLTAEEIGLM
LDSGPTEELIFRRSGGGGGGGGGGMPMPPREIKIIPTSTGDWIFHFSMEA
EEMFEVTVTRGRKAILKRLIQMSLPAIFGWGGGGGGGGAGGGTAAAPLGG
GLGGGGGMGRGGGIGVAGIGGGGMGGGGERGGGMTPF* back to topmRNA from alignment at scaffold_19:457843..459315+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7414 ID=mRNA_7414|Name=jgi.p|Nanoce1779_2|652348|organism=Nannochloropsis oceanica|type=mRNA|length=1473bp|location=Sequence derived from alignment at scaffold_19:457843..459315+ (Nannochloropsis oceanica)
CTGCAAGTCGCTTGGTGACTTTTTGGACAGTGTCGTCTAGGGTGAAATTA
TAGAACTTGTCGTGACTGATCCCATTGGGAGAAGCGACGACAACCTCCCC
ACCTGCAAAGCGAAGCTATTTAATTAAAATGCAGTGTCGGCCAGCTCAGG
GGTGCAGTATTACTGAATCTATACATGGTAGTTAGGACAAAGGCAGAAGC
ATGCTGCCGCACGCTATCACAGCACGTCTCAGTGTCCCGGCCAAACGATT
CAGCGATGCAGCGTCACGGCGGTCACACGCTTTTTCCCCACTACCTTACG
ATCACCACAAATTGTTACAGGCAGCACCATGCTTCTTCTCCGTAGCGGCA
CCAGGAGCAGCAGCAGCGCCCGGACTGTAAATTCTCGATTCTTCCGGCTT
CCTGCAGCCCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACGAAACAT
AGTACTGATGCAACGGAAGCCCTGTACGAGTACCCACAAGAACAGCAGCG
CCACCTGCTTCCTTTCCTCCCTCCCTTGTACCTATTCCTCTACTCTACGC
GGTATCTCCTTTTCCTCCTCCTCCTCCTTCCCCTCCTCCTCTTCCTCCCC
CTCCTCCGTAACCTTTTCCACATCATCCTTCTCCGATATGGGCAATAATG
CCTTCCCTACCAATCAGAGGAGTGACCCTGACTTCGTCGTCTTTGGCGAG
AACTGCATGCTCAAGTTTCGCCTGACCACCTACCAACAACCCGGGGGGGG
GGTGGGCGGTGGTGGTGGTGGCGCTCCACCTGGAGGAGGAGGCGGAGGAG
GAGGCACTCTTAACTACAAGAACAATGCGCGGTTGCTCGTAGAATTTACG
AAGAAGGGCCCAAGTGGTGCGTATGAATGGAAGGGGACAAAAAGGCTCTC
CCTGACGGCAGAGGAGATCGGGCTTATGCTTGACAGTGGCCCGACAGAAG
AGCTCATATTCCGTCGTTCAGGGGGCGGAGGAGGAGGGGGAGGGGGAGGG
ATGCCGATGCCACCGAGGGAGATAAAGATCATCCCCACATCGACGGGGGA
TTGGATCTTCCATTTCTCGATGGAGGCGGAGGAGATGTTCGAGGTGACTG
TGACGAGGGGAAGGAAGGCGATTTTGAAACGATTAATACAGATGAGCCTG
CCTGCTATTTTTGGTTGGGGAGGAGGAGGAGGAGGAGGGGGAGCGGGAGG
AGGAACAGCAGCAGCGCCTCTAGGAGGAGGATTAGGAGGAGGAGGAGGGA
TGGGTAGGGGGGGAGGGATAGGGGTTGCAGGGATAGGAGGTGGAGGGATG
GGAGGAGGGGGTGAGAGGGGAGGAGGAATGACGCCTTTTTAGAGTGGAGG
GGAGGGAGGAAAGGAATATCTATACGAGTATGTGTCATTTATAATATATA
TTTGTATAAAATTAGGGTCGGAAAGATGAAGGCGTATGGGTGGGCGAACG
AGCCGAGGAGAGGGAGTCGAGAG back to topCoding sequence (CDS) from alignment at scaffold_19:457843..459315+ >mRNA_7414 ID=mRNA_7414|Name=jgi.p|Nanoce1779_2|652348|organism=Nannochloropsis oceanica|type=CDS|length=1014bp|location=Sequence derived from alignment at scaffold_19:457843..459315+ (Nannochloropsis oceanica)
ATGCTTCTTCTCCGTAGCGGCACCAGGAGCAGCAGCAGCGCCCGGACTGT
AAATTCTCGATTCTTCCGGCTTCCTGCAGCCCAGCAGCAGCAGCAGCAGC
AGCAGCAACAGCAACGAAACATAGTACTGATGCAACGGAAGCCCTGTACG
AGTACCCACAAGAACAGCAGCGCCACCTGCTTCCTTTCCTCCCTCCCTTG
TACCTATTCCTCTACTCTACGCGGTATCTCCTTTTCCTCCTCCTCCTCCT
TCCCCTCCTCCTCTTCCTCCCCCTCCTCCGTAACCTTTTCCACATCATCC
TTCTCCGATATGGGCAATAATGCCTTCCCTACCAATCAGAGGAGTGACCC
TGACTTCGTCGTCTTTGGCGAGAACTGCATGCTCAAGTTTCGCCTGACCA
CCTACCAACAACCCGGGGGGGGGGTGGGCGGTGGTGGTGGTGGCGCTCCA
CCTGGAGGAGGAGGCGGAGGAGGAGGCACTCTTAACTACAAGAACAATGC
GCGGTTGCTCGTAGAATTTACGAAGAAGGGCCCAAGTGGTGCGTATGAAT
GGAAGGGGACAAAAAGGCTCTCCCTGACGGCAGAGGAGATCGGGCTTATG
CTTGACAGTGGCCCGACAGAAGAGCTCATATTCCGTCGTTCAGGGGGCGG
AGGAGGAGGGGGAGGGGGAGGGATGCCGATGCCACCGAGGGAGATAAAGA
TCATCCCCACATCGACGGGGGATTGGATCTTCCATTTCTCGATGGAGGCG
GAGGAGATGTTCGAGGTGACTGTGACGAGGGGAAGGAAGGCGATTTTGAA
ACGATTAATACAGATGAGCCTGCCTGCTATTTTTGGTTGGGGAGGAGGAG
GAGGAGGAGGGGGAGCGGGAGGAGGAACAGCAGCAGCGCCTCTAGGAGGA
GGATTAGGAGGAGGAGGAGGGATGGGTAGGGGGGGAGGGATAGGGGTTGC
AGGGATAGGAGGTGGAGGGATGGGAGGAGGGGGTGAGAGGGGAGGAGGAA
TGACGCCTTTTTAG back to top
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