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Properties
| Property Name | Value |
|---|
| TranscriptId | 598730 |
| Track | FilteredModels2 |
| ProteinId | 598644 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_19 | supercontig | scaffold_19:436214..438719 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7407 ID=mRNA_7407|Name=jgi.p|Nanoce1779_2|598644|organism=Nannochloropsis oceanica|type=mRNA|length=2132bp
ACAGCAATGGGAGGCACCAACGCCAGCAGCAATAATCCCTTTCGGGCCGA
GCAAACGGCGCAGATGGGGGAGGAAGACAATGTCAGTTCGACGGCTGCTT
CAGCCACGCATCCGCACGCCCGCCTATGTGAACCCCCAGAGGCCTCGCTC
TGTCAAGCGCTGGCCGATAAGGAGGCTGCTTTGACACGACTTCAAGACCA
CGAGATCTTGGTCAAGGAGTTGGTGCAGACTATGGACAACATTATCAAAG
AGAAAGAGACCCTTCAAACCGAGCTTGACGCCGCTCGTCGCCAAACGCAA
GCCCAGGGCAACGGCACTGACGCGTCCACCCTCGCCCAAGCTATGGTCGC
GACTAATGCAACAGAGGTGCACATCACTTCGCTCGAGGCACAGCTTCAGA
ACTTGACTGCAGAAGGGCACACCGCGCGGGCAGAGATACTAAGACTGACG
CAAGAGCTGGCGACGGCCAAGGATGACGTACTTGGGCTCACGCGCTGGAA
TCGGCAGGAGATGAGGGACCGTCGAGAAGCGGAGCAGGAATCCGAGACCT
TGCGGGAGAGGGTGGCCCAGATGTCACGTCGCCTGCGTCGCGTGGCGGAA
CGAGCGCGGGAGGACACTCTAGACCAGCACACCGAGACGAGTGGCAATGT
AGTCCGCACTCACACAAGCAACACTACCACCACCACTGCCATCGACCTAG
GACAGCGGGGGCGAAAAGAAGAGCGACAGCAGGATCGGAAACAAGAGCGA
AAGCAGGGCCGAAAGCAGGAGCGACAGCAGGAGCGACAGCAGCAGCGTCA
AGAGGAGCGGCAGCAGCAGCAGCAGCAGCAGCCCTTGCTGCAGGCCAAGG
TGACGGACCTGGAGAACGAGCTACAGTATGCTTGCTGTCTCCGCGAGAGC
CTGGAGACTGCCGTCGTGGATGCACAGGAAAAACTGGATCAGTGTCAGGC
AGAACTCCGCACAGCGCTGGACCGTCTGACAGGTCTTGAGGCTTTGGTCG
AAACGCACGAGGCGGGTAAGAATCTGGTGGACGAGGCGCAAGGGGAGATT
GAGCGGTTGGAGCTTGCAAACCACGATCTGCAGCGGGAGATAATGGGGTT
GGAGGCCTTGCTTGAAGAAGCCCGCCAGATTACCGAGGTGGAGAAGCGTC
AAGTGACAATAATGGAGGTTGGGCTTGAGGAGGCCACGGCCAAGGCTCAG
GCGTCGGTGGACAAGATCATCCAGCTCAAGATGACGAAGGCTGATTTGAT
AGAACGGGTTTCGCACTTGGAAGTCGAACGTGCGCAAGATCAAGCTCGAA
TATCTCTCATGCAAGAGGAGCGGGATGACTGGCGAAAGCGCGCGGAAGAC
GAGGTGTACGAGTGGGTGGGGATCTCGGGCGAACCAGATGCTTATCCCGA
AGACAAACCGAAGGAGGTCACAGCGATGGCTGAGGTCACTGAGGCCATCG
TGGACGCACGTGATTACTCCGAGGTGGAAACCGCCGTCACGACGACAACG
ACGACGGGGGCCGCGGCTGCTGCGACTACGAGCACGCATCTGACTCCCCC
TAAGCGAGAGGAACTGGGAGGGCTTGACCCAGTGGAGGCGCTGATGAAGG
AAAATTTAGCCTTGCGCGCTCAGATTGAAGGACTGCGTCGGCGCGAAGCG
GAGGTGCAGTCATGGTCGGTGTGAGGAAAAGGTTATATTTATGTTTCCCA
AAGAAAAAAGTTATCCTGAAAGGCAGGGGAAAAGAGAGAGAAAGCAGGAG
AAAGAGAATCTCTGAGAGAAGGAGAGTTGAGAACATACAAGTGCACGGAC
CCGGAAATAAAGGAAAGTAGGGAGCGACGCTAGACAGCAGAGAAACTTGG
ACAGCAATTGCGGTGAATTCAGTGCAGGCGTATTTATTTGAGATGAAGAG
ATAAGTGGGTGGGAGTTTGTATCCCAGAACAGTCAGGGAGACTTATAGAG
AAGGTTGAGAAACTATAACTTTACGTAGAGTCAGACCAACAGGCGAAAAG
CGAAGTGACAAGGAAAGGAGTATTACAAAAAAACAGGGGATTAAAAAAAG
AGGGGAAACAATAAGACATGTAGGGAAAGAAGAGTGCGTTTGAATACAAC
TTAATGAATTTGAAAAAACTTGAAAAATCTCG back to topprotein sequence of jgi.p|Nanoce1779_2|598644 >mRNA_7407-protein ID=mRNA_7407-protein|Name=jgi.p|Nanoce1779_2|598644|organism=Nannochloropsis oceanica|type=polypeptide|length=556bp
MGGTNASSNNPFRAEQTAQMGEEDNVSSTAASATHPHARLCEPPEASLCQ
ALADKEAALTRLQDHEILVKELVQTMDNIIKEKETLQTELDAARRQTQAQ
GNGTDASTLAQAMVATNATEVHITSLEAQLQNLTAEGHTARAEILRLTQE
LATAKDDVLGLTRWNRQEMRDRREAEQESETLRERVAQMSRRLRRVAERA
REDTLDQHTETSGNVVRTHTSNTTTTTAIDLGQRGRKEERQQDRKQERKQ
GRKQERQQERQQQRQEERQQQQQQQPLLQAKVTDLENELQYACCLRESLE
TAVVDAQEKLDQCQAELRTALDRLTGLEALVETHEAGKNLVDEAQGEIER
LELANHDLQREIMGLEALLEEARQITEVEKRQVTIMEVGLEEATAKAQAS
VDKIIQLKMTKADLIERVSHLEVERAQDQARISLMQEERDDWRKRAEDEV
YEWVGISGEPDAYPEDKPKEVTAMAEVTEAIVDARDYSEVETAVTTTTTT
GAAAAATTSTHLTPPKREELGGLDPVEALMKENLALRAQIEGLRRREAEV
QSWSV* back to topmRNA from alignment at scaffold_19:436214..438719- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7407 ID=mRNA_7407|Name=jgi.p|Nanoce1779_2|598644|organism=Nannochloropsis oceanica|type=mRNA|length=2506bp|location=Sequence derived from alignment at scaffold_19:436214..438719- (Nannochloropsis oceanica)
ACAGCAATGGGAGGCACCAACGCCAGCAGCAATAATCCCTTTCGGGCCGA
GCAAACGGCGCAGATGGGGGAGGAAGACAATGTCAGTTCGACGGCTGCTT
CAGCCACGCATCCGCACGCCCGCCTATGTGAACCCCCAGAGGCCTCGCTC
TGTCAAGCGCTGGCCGATAAGGAGGCTGCTTTGACACGACTTCAAGACCA
CGAGATCTTGGTCAAGGAGTTGGTGCAGACTATGGACAACATTATCAAAG
AGAAAGGTGGGTGGCGCATGCTATTTGTTTTCTCTTCCAGTATGTACCGC
GAGAGTGTGTCTGTGTGTCGTTGAAGATGACAGCCGTTATTATCGAATGA
GGAAGTTGCAGCCTGCTGGTGAAAGGCGTAGAAGGAGACACGATAGGCGG
CCCCAGCAATCCATTAAGGCCTGTATTTCCGCCCCCACCCCATCCACCTC
TGTAAATTCTGCGCATGGATCATAAAAGTCCCATAACTTTATGAGCCCTA
CTCACATACTGTCCTTCAAGCTTACAATCCTTGTTATCTCACGTCAGATG
GATTCTTCCGCGAATTCGTCTCTCTCTGTGAGAGATATGGCTTATGTATT
GCCTTGTTCCACCGGTCTCATAAACAACAGAGACCCTTCAAACCGAGCTT
GACGCCGCTCGTCGCCAAACGCAAGCCCAGGGCAACGGCACTGACGCGTC
CACCCTCGCCCAAGCTATGGTCGCGACTAATGCAACAGAGGTGCACATCA
CTTCGCTCGAGGCACAGCTTCAGAACTTGACTGCAGAAGGGCACACCGCG
CGGGCAGAGATACTAAGACTGACGCAAGAGCTGGCGACGGCCAAGGATGA
CGTACTTGGGCTCACGCGCTGGAATCGGCAGGAGATGAGGGACCGTCGAG
AAGCGGAGCAGGAATCCGAGACCTTGCGGGAGAGGGTGGCCCAGATGTCA
CGTCGCCTGCGTCGCGTGGCGGAACGAGCGCGGGAGGACACTCTAGACCA
GCACACCGAGACGAGTGGCAATGTAGTCCGCACTCACACAAGCAACACTA
CCACCACCACTGCCATCGACCTAGGACAGCGGGGGCGAAAAGAAGAGCGA
CAGCAGGATCGGAAACAAGAGCGAAAGCAGGGCCGAAAGCAGGAGCGACA
GCAGGAGCGACAGCAGCAGCGTCAAGAGGAGCGGCAGCAGCAGCAGCAGC
AGCAGCCCTTGCTGCAGGCCAAGGTGACGGACCTGGAGAACGAGCTACAG
TATGCTTGCTGTCTCCGCGAGAGCCTGGAGACTGCCGTCGTGGATGCACA
GGAAAAACTGGATCAGTGTCAGGCAGAACTCCGCACAGCGCTGGACCGTC
TGACAGGTCTTGAGGCTTTGGTCGAAACGCACGAGGCGGGTAAGAATCTG
GTGGACGAGGCGCAAGGGGAGATTGAGCGGTTGGAGCTTGCAAACCACGA
TCTGCAGCGGGAGATAATGGGGTTGGAGGCCTTGCTTGAAGAAGCCCGCC
AGATTACCGAGGTGGAGAAGCGTCAAGTGACAATAATGGAGGTTGGGCTT
GAGGAGGCCACGGCCAAGGCTCAGGCGTCGGTGGACAAGATCATCCAGCT
CAAGATGACGAAGGCTGATTTGATAGAACGGGTTTCGCACTTGGAAGTCG
AACGTGCGCAAGATCAAGCTCGAATATCTCTCATGCAAGAGGAGCGGGAT
GACTGGCGAAAGCGCGCGGAAGACGAGGTGTACGAGTGGGTGGGGATCTC
GGGCGAACCAGATGCTTATCCCGAAGACAAACCGAAGGAGGTCACAGCGA
TGGCTGAGGTCACTGAGGCCATCGTGGACGCACGTGATTACTCCGAGGTG
GAAACCGCCGTCACGACGACAACGACGACGGGGGCCGCGGCTGCTGCGAC
TACGAGCACGCATCTGACTCCCCCTAAGCGAGAGGAACTGGGAGGGCTTG
ACCCAGTGGAGGCGCTGATGAAGGAAAATTTAGCCTTGCGCGCTCAGATT
GAAGGACTGCGTCGGCGCGAAGCGGAGGTGCAGTCATGGTCGGTGTGAGG
AAAAGGTTATATTTATGTTTCCCAAAGAAAAAAGTTATCCTGAAAGGCAG
GGGAAAAGAGAGAGAAAGCAGGAGAAAGAGAATCTCTGAGAGAAGGAGAG
TTGAGAACATACAAGTGCACGGACCCGGAAATAAAGGAAAGTAGGGAGCG
ACGCTAGACAGCAGAGAAACTTGGACAGCAATTGCGGTGAATTCAGTGCA
GGCGTATTTATTTGAGATGAAGAGATAAGTGGGTGGGAGTTTGTATCCCA
GAACAGTCAGGGAGACTTATAGAGAAGGTTGAGAAACTATAACTTTACGT
AGAGTCAGACCAACAGGCGAAAAGCGAAGTGACAAGGAAAGGAGTATTAC
AAAAAAACAGGGGATTAAAAAAAGAGGGGAAACAATAAGACATGTAGGGA
AAGAAGAGTGCGTTTGAATACAACTTAATGAATTTGAAAAAACTTGAAAA
ATCTCG back to topCoding sequence (CDS) from alignment at scaffold_19:436214..438719- >mRNA_7407 ID=mRNA_7407|Name=jgi.p|Nanoce1779_2|598644|organism=Nannochloropsis oceanica|type=CDS|length=3336bp|location=Sequence derived from alignment at scaffold_19:436214..438719- (Nannochloropsis oceanica)
AGACCCTTCAAACCGAGCTTGACGCCGCTCGTCGCCAAACGCAAGCCCAG
GGCAACGGCACTGACGCGTCCACCCTCGCCCAAGCTATGGTCGCGACTAA
TGCAACAGAGGTGCACATCACTTCGCTCGAGGCACAGCTTCAGAACTTGA
CTGCAGAAGGGCACACCGCGCGGGCAGAGATACTAAGACTGACGCAAGAG
CTGGCGACGGCCAAGGATGACGTACTTGGGCTCACGCGCTGGAATCGGCA
GGAGATGAGGGACCGTCGAGAAGCGGAGCAGGAATCCGAGACCTTGCGGG
AGAGGGTGGCCCAGATGTCACGTCGCCTGCGTCGCGTGGCGGAACGAGCG
CGGGAGGACACTCTAGACCAGCACACCGAGACGAGTGGCAATGTAGTCCG
CACTCACACAAGCAACACTACCACCACCACTGCCATCGACCTAGGACAGC
GGGGGCGAAAAGAAGAGCGACAGCAGGATCGGAAACAAGAGCGAAAGCAG
GGCCGAAAGCAGGAGCGACAGCAGGAGCGACAGCAGCAGCGTCAAGAGGA
GCGGCAGCAGCAGCAGCAGCAGCAGCCCTTGCTGCAGGCCAAGGTGACGG
ACCTGGAGAACGAGCTACAGTATGCTTGCTGTCTCCGCGAGAGCCTGGAG
ACTGCCGTCGTGGATGCACAGGAAAAACTGGATCAGTGTCAGGCAGAACT
CCGCACAGCGCTGGACCGTCTGACAGGTCTTGAGGCTTTGGTCGAAACGC
ACGAGGCGGGTAAGAATCTGGTGGACGAGGCGCAAGGGGAGATTGAGCGG
TTGGAGCTTGCAAACCACGATCTGCAGCGGGAGATAATGGGGTTGGAGGC
CTTGCTTGAAGAAGCCCGCCAGATTACCGAGGTGGAGAAGCGTCAAGTGA
CAATAATGGAGGTTGGGCTTGAGGAGGCCACGGCCAAGGCTCAGGCGTCG
GTGGACAAGATCATCCAGCTCAAGATGACGAAGGCTGATTTGATAGAACG
GGTTTCGCACTTGGAAGTCGAACGTGCGCAAGATCAAGCTCGAATATCTC
TCATGCAAGAGGAGCGGGATGACTGGCGAAAGCGCGCGGAAGACGAGGTG
TACGAGTGGGTGGGGATCTCGGGCGAACCAGATGCTTATCCCGAAGACAA
ACCGAAGGAGGTCACAGCGATGGCTGAGGTCACTGAGGCCATCGTGGACG
CACGTGATTACTCCGAGGTGGAAACCGCCGTCACGACGACAACGACGACG
GGGGCCGCGGCTGCTGCGACTACGAGCACGCATCTGACTCCCCCTAAGCG
AGAGGAACTGGGAGGGCTTGACCCAGTGGAGGCGCTGATGAAGGAAAATT
TAGCCTTGCGCGCTCAGATTGAAGGACTGCGTCGGCGCGAAGCGGAGGTG
CAGTCATGGTCGGTGTGAATGGGAGGCACCAACGCCAGCAGCAATAATCC
CTTTCGGGCCGAGCAAACGGCGCAGATGGGGGAGGAAGACAATGTCAGTT
CGACGGCTGCTTCAGCCACGCATCCGCACGCCCGCCTATGTGAACCCCCA
GAGGCCTCGCTCTGTCAAGCGCTGGCCGATAAGGAGGCTGCTTTGACACG
ACTTCAAGACCACGAGATCTTGGTCAAGGAGTTGGTGCAGACTATGGACA
ACATTATCAAAGAGAAAGAGACCCTTCAAACCGAGCTTGACGCCGCTCGT
CGCCAAACGCAAGCCCAGGGCAACGGCACTGACGCGTCCACCCTCGCCCA
AGCTATGGTCGCGACTAATGCAACAGAGGTGCACATCACTTCGCTCGAGG
CACAGCTTCAGAACTTGACTGCAGAAGGGCACACCGCGCGGGCAGAGATA
CTAAGACTGACGCAAGAGCTGGCGACGGCCAAGGATGACGTACTTGGGCT
CACGCGCTGGAATCGGCAGGAGATGAGGGACCGTCGAGAAGCGGAGCAGG
AATCCGAGACCTTGCGGGAGAGGGTGGCCCAGATGTCACGTCGCCTGCGT
CGCGTGGCGGAACGAGCGCGGGAGGACACTCTAGACCAGCACACCGAGAC
GAGTGGCAATGTAGTCCGCACTCACACAAGCAACACTACCACCACCACTG
CCATCGACCTAGGACAGCGGGGGCGAAAAGAAGAGCGACAGCAGGATCGG
AAACAAGAGCGAAAGCAGGGCCGAAAGCAGGAGCGACAGCAGGAGCGACA
GCAGCAGCGTCAAGAGGAGCGGCAGCAGCAGCAGCAGCAGCAGCCCTTGC
TGCAGGCCAAGGTGACGGACCTGGAGAACGAGCTACAGTATGCTTGCTGT
CTCCGCGAGAGCCTGGAGACTGCCGTCGTGGATGCACAGGAAAAACTGGA
TCAGTGTCAGGCAGAACTCCGCACAGCGCTGGACCGTCTGACAGGTCTTG
AGGCTTTGGTCGAAACGCACGAGGCGGGTAAGAATCTGGTGGACGAGGCG
CAAGGGGAGATTGAGCGGTTGGAGCTTGCAAACCACGATCTGCAGCGGGA
GATAATGGGGTTGGAGGCCTTGCTTGAAGAAGCCCGCCAGATTACCGAGG
TGGAGAAGCGTCAAGTGACAATAATGGAGGTTGGGCTTGAGGAGGCCACG
GCCAAGGCTCAGGCGTCGGTGGACAAGATCATCCAGCTCAAGATGACGAA
GGCTGATTTGATAGAACGGGTTTCGCACTTGGAAGTCGAACGTGCGCAAG
ATCAAGCTCGAATATCTCTCATGCAAGAGGAGCGGGATGACTGGCGAAAG
CGCGCGGAAGACGAGGTGTACGAGTGGGTGGGGATCTCGGGCGAACCAGA
TGCTTATCCCGAAGACAAACCGAAGGAGGTCACAGCGATGGCTGAGGTCA
CTGAGGCCATCGTGGACGCACGTGATTACTCCGAGGTGGAAACCGCCGTC
ACGACGACAACGACGACGGGGGCCGCGGCTGCTGCGACTACGAGCACGCA
TCTGACTCCCCCTAAGCGAGAGGAACTGGGAGGGCTTGACCCAGTGGAGG
CGCTGATGAAGGAAAATTTAGCCTTGCGCGCTCAGATTGAAGGACTGCGT
CGGCGCGAAGCGGAGGTGCAGTCATGGTCGGTGTGAATGGGAGGCACCAA
CGCCAGCAGCAATAATCCCTTTCGGGCCGAGCAAACGGCGCAGATGGGGG
AGGAAGACAATGTCAGTTCGACGGCTGCTTCAGCCACGCATCCGCACGCC
CGCCTATGTGAACCCCCAGAGGCCTCGCTCTGTCAAGCGCTGGCCGATAA
GGAGGCTGCTTTGACACGACTTCAAGACCACGAGATCTTGGTCAAGGAGT
TGGTGCAGACTATGGACAACATTATCAAAGAGAAAG back to top
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