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Properties
| Property Name | Value |
|---|
| TranscriptId | 132373 |
| Track | FilteredModels2 |
| ProteinId | 132287 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_19 | supercontig | scaffold_19:331063..332783 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7362 ID=mRNA_7362|Name=jgi.p|Nanoce1779_2|132287|organism=Nannochloropsis oceanica|type=mRNA|length=1158bp
TCGCTGAGTCCGCCGAGCTTGCCTTCTCTTTCTTTCTCCCTCCCTACAGC
AAGAGGATTCCCAGCCTCTTCTACCTCGGTGTCGGGAATGGCAGTTCAGG
AAAAGGAAGAGGAGGAGGAAGATGTAGAGGAAAAGGAAGAGGACTACGAG
AAGGAGAGAAGGGAGCAGCAGATGCTCAAGGCGAAGGAGGATGGACGAGC
GAGGGAGGTGCGGACAAAAAGAGAGAATGGGGTGGCGCCTATGATGCAGG
AGGACGAGGGGATAGGCGGCGAGGGAGAGGGGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGAAGGAGGAGGAGGAGGAAGCATC
CTATAAATCGGATGACAGCGTGCAGAACGAGGACGATGAGCAAGAAAGCA
TAGGGGAAGAGATCGATTTGGACTCTCAAGGCACGCCAGCCTTGCAGCTG
AACGTCACATTTGCTCTTCAGTCTGGCAAAGGCGATGGGGAGGGAGGGAG
GCGGGGAGGGATTGAGGGCGAAGAGCAGGATGGAAGGGCGTCGCCGGACC
GAGGAATGAAGAGACAAGGAGTAGATCAAACAGGCTTGCCGGATGAAATT
GATTCGAGCGAGGAAAGGAAGGTGGTAGCAGCAGCGACGAGTGCAGGAGC
AGTAGCGGCAGCAGCAGCAATTTATGGGGGGGGACAAGAAAGAGGAGGAG
GAAGAGGAGCGGCGATGCAGTCTCGTCACCTTACAGTTGCGCAGCGGCAA
AAGACTCGGTCGTCGAGTATACGGAATGAGACTCAGATTGATTTGACTCT
TGACTAAAGCGGGGTTTGGGAGGGAGGGATGGAGAGGAAAGTGGGAATAA
GAATGGCGCGGGGCTCGAACTGTAGTAATAGAAACATGTCTAGACACTCA
GCATGAGAACTTTAATACTTCGAAATTTAATAGGAAATTAGTACATTACG
TGAGAAATGACCATGACGAACATAGAGAGACGACAAGAAAAGCAAGGGTC
CTCCCAAGATCAGCAAGCAAGCACTCGAGGAAGCACTCAACTATGAGCAA
AATCTGTGGTGTCAAACGACGTTGCCTCTTGTATGGCATTGGTGCGGCAC
TAGTGCCCGCCATTGTGATTGCATCTTTAGTAGGGGTCTATTACCCCAGG
GGTGAGTG back to topprotein sequence of jgi.p|Nanoce1779_2|132287 >mRNA_7362-protein ID=mRNA_7362-protein|Name=jgi.p|Nanoce1779_2|132287|organism=Nannochloropsis oceanica|type=polypeptide|length=240bp
MAVQEKEEEEEDVEEKEEDYEKERREQQMLKAKEDGRAREVRTKRENGVA
PMMQEDEGIGGEGEGEEEEEEEEEEEEEEEKEEEEEASYKSDDSVQNEDD
EQESIGEEIDLDSQGTPALQLNVTFALQSGKGDGEGGRRGGIEGEEQDGR
ASPDRGMKRQGVDQTGLPDEIDSSEERKVVAAATSAGAVAAAAAIYGGGQ
ERGGGRGAAMQSRHLTVAQRQKTRSSSIRNETQIDLTLD* back to topmRNA from alignment at scaffold_19:331063..332783+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7362 ID=mRNA_7362|Name=jgi.p|Nanoce1779_2|132287|organism=Nannochloropsis oceanica|type=mRNA|length=1721bp|location=Sequence derived from alignment at scaffold_19:331063..332783+ (Nannochloropsis oceanica)
TCGCTGAGTCCGCCGAGCTTGCCTTCTCTTTCTTTCTCCCTCCCTACAGC
AAGAGGATTCCCAGCCTCTTCTACCTCGGTGTCGGGAATGGCAGTTCAGG
AAAAGGAAGAGGAGGAGGAAGATGTAGAGGAAAAGGAAGAGGACTACGAG
AAGGAGAGAAGGGAGCAGCAGATGCTCAAGGCGAAGGAGGATGGACGAGC
GAGGGAGGTGCGGACAAAAAGAGAGAATGGGGTGGCGCCTATGATGCAGG
AGGACGAGGGGATAGGCGGCGAGGGAGAGGGGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGAAGGAGGAGGAGGAGGAAGCATC
CTATAAATCGGATGACAGCGTGCAGAACGAGGACGATGAGCAAGAAAGCA
TAGGGGAAGAGATCGATTTGGACTCTCAAGGCACGCCAGCCTTGCAGCTG
AACGTCACATTTGCTCTTCAGTCTGGCAAAGGCGATGGGGAGGGAGGGAG
GCGGGGAGGGATTGAGGGCGAAGAGCAGGATGGAAGGGCGTCGCCGGACC
GAGGAATGAAGAGACAAGGAGTAGATCAAACAGGCTTGCCGGATGAAATT
GATTCGAGCGAGGAAAGGAAGGTGGTAGCAGCAGCGACGAGTGCAGGAGC
AGTAGCGGCAGCAGCAGCAATTTATGGGGGGGGACAAGAAAGAGGAGGAG
GAAGAGGAGCGGCGATGCAGTCTCGTCACCTTACAGTTGCGCAGCGGCAA
AAGACTCGGTCGTCGAGTATACGGAATGAGACTCAGATTGATTTGACTCT
TGACTAAAGCGGGGTTTGGGAGGGAGGGATGGAGAGGAAAGTGGGAATAA
GAATGGCGCGGGGCTCGAACTGTAGTAATAGAAACATGTCTAGACACTCA
GCATGAGAACTTTAATACTTCGAAATTTAATAGGAAATTAGTACATTACG
TGAGAAATGACCATGACGAACATAGAGAGGTAGGTACTCAGAATGGACCT
AAAGCACTTGAAGGCAATCCAACTTGTAACAAAATGAAGGTGAGACCTGA
CGAGCGTCTTTTAGACGCGTAGTCTTATTTGCCTATTTTTATCCTTTTCC
ATACATTTTACCCTGTATGTCTCTGCAGCTGCAGCACTTTCTTTTTCATT
CAAACATTCGAAAACGTGCACGCCGTTAATTTGATTCAACGTAAAATTCT
CTCAACGGCCTTTCTTGCTTCCGTCCGTCTGTCTCGTTTCGTTGCCTATT
GATAAGAGGGACATATGCATCCCGGCACGCGATCTTTGCATCTTGCACGT
ATGCGAGTTGTCCCTGTTTTGTCATGGACGGGGTGGGGTGTTCAAGTGCT
GCCTGAATGCGACGTATCCTCAAACATCCGAGGAACAAGCTACACCTTAC
AAAGTAAAGTAGACTATCCCTCTCATGGAAGAAGACGAGTAAAACGACAA
GGCACACCATCAGCTTCTCTACAACTGTGCAAAATTATTCATCTCTCAAG
CCCATTGACAACTAATTGACATGCAAATTATAAACTTCACAGACGACAAG
AAAAGCAAGGGTCCTCCCAAGATCAGCAAGCAAGCACTCGAGGAAGCACT
CAACTATGAGCAAAATCTGTGGTGTCAAACGACGTTGCCTCTTGTATGGC
ATTGGTGCGGCACTAGTGCCCGCCATTGTGATTGCATCTTTAGTAGGGGT
CTATTACCCCAGGGGTGAGTG back to topCoding sequence (CDS) from alignment at scaffold_19:331063..332783+ >mRNA_7362 ID=mRNA_7362|Name=jgi.p|Nanoce1779_2|132287|organism=Nannochloropsis oceanica|type=CDS|length=720bp|location=Sequence derived from alignment at scaffold_19:331063..332783+ (Nannochloropsis oceanica)
ATGGCAGTTCAGGAAAAGGAAGAGGAGGAGGAAGATGTAGAGGAAAAGGA
AGAGGACTACGAGAAGGAGAGAAGGGAGCAGCAGATGCTCAAGGCGAAGG
AGGATGGACGAGCGAGGGAGGTGCGGACAAAAAGAGAGAATGGGGTGGCG
CCTATGATGCAGGAGGACGAGGGGATAGGCGGCGAGGGAGAGGGGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGAAGGAGGAGG
AGGAGGAAGCATCCTATAAATCGGATGACAGCGTGCAGAACGAGGACGAT
GAGCAAGAAAGCATAGGGGAAGAGATCGATTTGGACTCTCAAGGCACGCC
AGCCTTGCAGCTGAACGTCACATTTGCTCTTCAGTCTGGCAAAGGCGATG
GGGAGGGAGGGAGGCGGGGAGGGATTGAGGGCGAAGAGCAGGATGGAAGG
GCGTCGCCGGACCGAGGAATGAAGAGACAAGGAGTAGATCAAACAGGCTT
GCCGGATGAAATTGATTCGAGCGAGGAAAGGAAGGTGGTAGCAGCAGCGA
CGAGTGCAGGAGCAGTAGCGGCAGCAGCAGCAATTTATGGGGGGGGACAA
GAAAGAGGAGGAGGAAGAGGAGCGGCGATGCAGTCTCGTCACCTTACAGT
TGCGCAGCGGCAAAAGACTCGGTCGTCGAGTATACGGAATGAGACTCAGA
TTGATTTGACTCTTGACTAA back to top
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