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Properties
Property Name | Value |
TranscriptId | 132343 |
Track | FilteredModels2 |
ProteinId | 132257 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_19 | supercontig | scaffold_19:322420..325355 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7359 ID=mRNA_7359|Name=jgi.p|Nanoce1779_2|132257|organism=Nannochloropsis oceanica|type=mRNA|length=2800bp TGTGGTCCCCTGTGCATGTCTGCAGTAGCTAGCTAAGACGTCAATGGACT AGCCCAACGCACCCCCTCTCAAATCAACGACGTCGCTCTGGCGTCCGTTG ACTTGATGCACCAACGTCGCCGCAGACTAACTGTCTAGGTGGCCCTACCC AGCACTCGTTGGTAAACCAACAAAGTTAGAACAAAATGAGTATATTTCTG CTTGCCAGTATGCGACACCATGATGCGACTGCGTTTTCAATCGAAAGAGG CTCCTTTGCCTGACCACGAATACCACCACCACACGAGCCCCACTAACAAA CCTTTCTTTCCCACCACAAACCCTCGCACAACAGGCTGAATAGAGAAAAA GGAAATGAAAAAGATCACATATTTCGCCTCGCCCCGCACTGACAGCATCG GCGGGGACAGCGCCAAGAAGCAGAGGAAACCATCCTTCTCTCTCGCCCCT ACCTCCGGTACCACCCCCAGAGGCAATGAAAGCTTGGACTTAACGGCCGA CGTCCGTGAAGTCCTCTACGACGGAGGCAACAGCCATAGCAACCACAATA TCAACAGTAGCATCAGTCCCCGCAGCATCAATAGCCCCCGCAAGCTCCCT CCTGCCTTGACCAGCATTGCCTCCCCTCCTTCCCCCCCCTCTCCTAAGGA AAAACGCGGCAAGATCGACTTCTCTCTGCTCAGCTCCTTGTCACCCGGTC GGAAGAAAAGCAGCACTAGCTGCTGCAGCCGTAGCAGCAGTAATAGCAGC CCAACCATTACCCTCAAGGCTGCCACTTCTAGCGCTCCCGCTGGTGCGGG GAATCTGACCGACCAAATGCCTTCCTCCCCTGTCTCCTTCCTCCCCACTT TCAACAGTATTACACACCCCTCCTCCTCCTTTGTACCCGCTGGAGGCACC CCACCCAATACTGCCCGCTCTCCTCGCACTCACAGTAATACCGCTGCCAC CATCCTTTCCTCCCCTTCCTCCTCCTCCTCCTCCACCCGCTCTCCACACC GCCAGCGCGCAGAGGGTCTCAGGGGACTTCTTGGTTACTCCTCCCCCTCC CCCCCCTCCGACTCCCCCATCCACCTCGCTGCCCGTCAAGGCGATATCTC TCTCCTTCAGACTCTTCTTGCCTCCAACCCCTCCTTAGCTGCTGCCTTGG GACATGCCTCAGTGACACCCTTAATGCTCGCCGCTGGAGCAGGAGAGGAA GAGACCGTGAAATTCTTGCTAGATCTAGGGAGGGAAGGAGAGAAGAGTGG ACGGGTGCTAGTGGATGTTCTCAAGAGTGATGCAGGAAAGAAGACAGCAC TGCATCATGCGGCCATGGGAAACTTAGATTCGCCTGGAGTGGCACTGCTG CTCCTTGGGAAGCAGCAGCAGCATCAACAGTTGTTAGAAGCTGTGGACGT CGAGGGGAGGACGGCGTTGCACTACGCTGCTGTCAACGGACATTTAAAAA TGCTACGTGTGTTGTTAAGTGGAGAGAAGGGGGGAGTAAGTCCTCTTTCC TTGGTGATGGATAATGAGGGTTTGGACCCGCTACAATTTTTGTTGTCCAA AGTAGGAGGAGAGGGTGGCAAGATGTCGGCGGCGCATCGCACGGAAGTGG TCCGTACATTGCAGGACGCACAGGAGCGGGCGAAAAGGAAGAGCAACAGT AACAGCAGTGGGGATGGGAATGAGATGGAGGGCAGGAGTCCGGGGTGGGG GGGTGCGACGACGTGTGTATGGGATTGTGTGGCCCGCTTGTGTGGGGAGG CAGTGGCAGACGCGGAGGACGAGGAAGAGGAAGAAATCGTGCAGCCGATT GAACACCAGCTCCTCCGAATTTTCCGCGCTGCAGATATCTCTCAAGAAGC CAGTGACGTGTATCTAGATAACCTTCGCCGTCACGGCTACGATAACTTAA TTTCCCTTCATGCCATCGCCGCCGATCGCTTCAAAATGACCTTAGGGAAA TACGTCCCCGACCGGCAAGACCGCAAAAGAATCCTCAAAGCCCTTCATGA TGATGACGGGAATGGAAGTGGTCACATTTGTTCCAACCTCAAGCACTTAC CTGTTGGAGAGTATCTAAAGCATCTATTAAGTGTGCCTGATGAGATGGCG GGGCGTTACGCAGAGGGCTTGGGAGGGATGAACGTGCACACGGGCGCTCA GTTGTGTCAGGCATCCTACGATGAAGTAGAGTTGAATTTGGCTGGGATCT TATTGCAAGGGCACAAAAAGGCGTTGAAGATTTTATTGAAGACAAGCGCA GCAGCGTCGCCGCTAGCATAGGGGGTGGCATTTGGTGGGGTGGTATGAGA TATAAATGTGTGTGTGTACGTGTGTGTGGGTGTGGGTGGGTGGATGTGTG GGTGTGGGTGGGTGGATGTGTGGGTGTGTGGGTGTGTCAAGTGAATGACG AAAATGGATACGTGCAAGAGATGTCCGAGTATAAGTCTGATTATTGGAAA AGAATCGTTATTTCGTGTTTGCTGTGCGTGTTTGTTCCGACATGGACGAC CCGAGGCCGAGTGAGATGGGTGGGGAGGTTTTGGGGGAGGGAGGAGGGAA TGTTCCCCCTATTTGAGTTCTATATTCATGGTACGTGAATCTAAAGTCCA AGAGAGAGGAAAGTTTATATAAATATATATAATATTATCGAAGAAATCAA TGCGCGAGGAATGTCGCCTATATGAATGCGATTGATTTTGGTCGGAAAAT GAGCTCGTACAGCAAAGCACAAACGCGCTCGCCAATCCGTTGGTATCGCC CGTGAAAAGGAAGAAAAGCACGAGCACACATACACAACACACACACACCC back to topprotein sequence of jgi.p|Nanoce1779_2|132257 >mRNA_7359-protein ID=mRNA_7359-protein|Name=jgi.p|Nanoce1779_2|132257|organism=Nannochloropsis oceanica|type=polypeptide|length=639bp MKKITYFASPRTDSIGGDSAKKQRKPSFSLAPTSGTTPRGNESLDLTADV REVLYDGGNSHSNHNINSSISPRSINSPRKLPPALTSIASPPSPPSPKEK RGKIDFSLLSSLSPGRKKSSTSCCSRSSSNSSPTITLKAATSSAPAGAGN LTDQMPSSPVSFLPTFNSITHPSSSFVPAGGTPPNTARSPRTHSNTAATI LSSPSSSSSSTRSPHRQRAEGLRGLLGYSSPSPPSDSPIHLAARQGDISL LQTLLASNPSLAAALGHASVTPLMLAAGAGEEETVKFLLDLGREGEKSGR VLVDVLKSDAGKKTALHHAAMGNLDSPGVALLLLGKQQQHQQLLEAVDVE GRTALHYAAVNGHLKMLRVLLSGEKGGVSPLSLVMDNEGLDPLQFLLSKV GGEGGKMSAAHRTEVVRTLQDAQERAKRKSNSNSSGDGNEMEGRSPGWGG ATTCVWDCVARLCGEAVADAEDEEEEEIVQPIEHQLLRIFRAADISQEAS DVYLDNLRRHGYDNLISLHAIAADRFKMTLGKYVPDRQDRKRILKALHDD DGNGSGHICSNLKHLPVGEYLKHLLSVPDEMAGRYAEGLGGMNVHTGAQL CQASYDEVELNLAGILLQGHKKALKILLKTSAAASPLA* back to topmRNA from alignment at scaffold_19:322420..325355+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7359 ID=mRNA_7359|Name=jgi.p|Nanoce1779_2|132257|organism=Nannochloropsis oceanica|type=mRNA|length=2936bp|location=Sequence derived from alignment at scaffold_19:322420..325355+ (Nannochloropsis oceanica) TGTGGTCCCCTGTGCATGTCTGCAGTAGCTAGCTAAGACGTCAATGGACT
AGCCCAACGCACCCCCTCTCAAATCAACGACGTCGCTCTGGCGTCCGTTG
ACTTGATGCACCAACGTCGCCGCAGACTAACTGTCTAGGTGGCCCTACCC
AGCACTCGTTGGTAAACCAACAAAGTTAGAACAAAATGAGTATATTTCTG
CTTGCCAGTATGCGACACCATGATGCGACTGCGTTTTCAATCGAAAGAGG
CTCCTTTGCCTGACCACGAATACCACCACCACACGAGCCCCACTAACAAA
CCTTTCTTTCCCACCACAAACCCTCGCACAACAGGCTGAATAGAGAAAAA
GGAAATGAAAAAGATCACATATTTCGCCTCGCCCCGCACTGACAGCATCG
GCGGGGACAGCGCCAAGAAGCAGAGGAAACCATCCTTCTCTCTCGCCCCT
ACCTCCGGTACCACCCCCAGAGGCAATGAAAGCTTGGACTTAACGGCCGA
CGTCCGTGAAGTCCTCTACGACGGAGGCAACAGCCATAGCAACCACAATA
TCAACAGTAGCATCAGTCCCCGCAGCATCAATAGCCCCCGCAAGCTCCCT
CCTGCCTTGACCAGCATTGCCTCCCCTCCTTCCCCCCCCTCTCCTAAGGA
AAAACGCGGCAAGATCGACTTCTCTCTGCTCAGCTCCTTGTCACCCGGTC
GGAAGAAAAGCAGCACTAGCTGCTGCAGCCGTAGCAGCAGTAATAGCAGC
CCAACCATTACCCTCAAGGCTGCCACTTCTAGCGCTCCCGCTGGTGCGGG
GAATCTGACCGACCAAATGCCTTCCTCCCCTGTCTCCTTCCTCCCCACTT
TCAACAGTATTACACACCCCTCCTCCTCCTTTGTACCCGCTGGAGGCACC
CCACCCAATACTGCCCGCTCTCCTCGCACTCACAGTAATACCGCTGCCAC
CATCCTTTCCTCCCCTTCCTCCTCCTCCTCCTCCACCCGCTCTCCACACC
GCCAGCGCGCAGAGGGTCTCAGGGGACTTCTTGGTTACTCCTCCCCCTCC
CCCCCCTCCGACTCCCCCATCCACCTCGCTGCCCGTCAAGGCGATATCTC
TCTCCTTCAGACTCTTCTTGCCTCCAACCCCTCCTTAGCTGCTGCCTTGG
GACATGCCTCAGTGACACCCTTAATGCTCGCCGCTGGAGCAGGAGAGGAA
GAGACCGTGAAATTCTTGCTAGATCTAGGGAGGGAAGGAGAGAAGAGTGG
ACGGGTGCTAGTGGATGTTCTCAAGAGTGATGCAGGAAAGAAGACAGCAC
TGCATCATGCGGCCATGGGAAACTTAGATTCGCCTGGAGTGGCACTGCTG
CTCCTTGGGAAGCAGCAGCAGCATCAACAGTTGTTAGAAGCTGTGGACGT
CGAGGGGAGGACGGCGTTGCACTACGCTGCTGTCAACGGACATTTAAAAA
TGCTACGTGTGTTGTTAAGTGGAGAGAAGGGGGGAGTAAGTCCTCTTTCC
TTGGTGATGGATAATGAGGGTTTGGACCCGCTACAATTTTTGTTGTCCAA
AGTAGGAGGAGAGGGTGGCAAGATGTCGGCGGCGCATCGCACGGAAGTGG
TCCGTACATTGCAGGACGCACAGGAGCGGGCGAAAAGGAAGAGCAACAGT
AACAGCAGTGGGGATGGGAATGAGATGGAGGGCAGGAGTCCGGGGTGGGG
GGGTGCGACGACGTGTGTATGGGATTGTGTGGCCCGCTTGTGTGGGGAGG
CAGTGGCAGACGCGGAGGACGAGGAAGAGGAAGAAATCGTGCAGCGTAAG
TTTCTGTGTAGTTATGTGGTCTGTGAGCGATGTATATTTTCTCTTCTATT
TTTCTGCTGTCGCTATCTCGTCTTCCATATCAACTCATCCGCCCTCCCTC
CCTTCCTCCCTCCCTCTCTTCCTCCTCACAGCGATTGAACACCAGCTCCT
CCGAATTTTCCGCGCTGCAGATATCTCTCAAGAAGCCAGTGACGTGTATC
TAGATAACCTTCGCCGTCACGGCTACGATAACTTAATTTCCCTTCATGCC
ATCGCCGCCGATCGCTTCAAAATGACCTTAGGGAAATACGTCCCCGACCG
GCAAGACCGCAAAAGAATCCTCAAAGCCCTTCATGATGATGACGGGAATG
GAAGTGGTCACATTTGTTCCAACCTCAAGCACTTACCTGTTGGAGAGTAT
CTAAAGCATCTATTAAGTGTGCCTGATGAGATGGCGGGGCGTTACGCAGA
GGGCTTGGGAGGGATGAACGTGCACACGGGCGCTCAGTTGTGTCAGGCAT
CCTACGATGAAGTAGAGTTGAATTTGGCTGGGATCTTATTGCAAGGGCAC
AAAAAGGCGTTGAAGATTTTATTGAAGACAAGCGCAGCAGCGTCGCCGCT
AGCATAGGGGGTGGCATTTGGTGGGGTGGTATGAGATATAAATGTGTGTG
TGTACGTGTGTGTGGGTGTGGGTGGGTGGATGTGTGGGTGTGGGTGGGTG
GATGTGTGGGTGTGTGGGTGTGTCAAGTGAATGACGAAAATGGATACGTG
CAAGAGATGTCCGAGTATAAGTCTGATTATTGGAAAAGAATCGTTATTTC
GTGTTTGCTGTGCGTGTTTGTTCCGACATGGACGACCCGAGGCCGAGTGA
GATGGGTGGGGAGGTTTTGGGGGAGGGAGGAGGGAATGTTCCCCCTATTT
GAGTTCTATATTCATGGTACGTGAATCTAAAGTCCAAGAGAGAGGAAAGT
TTATATAAATATATATAATATTATCGAAGAAATCAATGCGCGAGGAATGT
CGCCTATATGAATGCGATTGATTTTGGTCGGAAAATGAGCTCGTACAGCA
AAGCACAAACGCGCTCGCCAATCCGTTGGTATCGCCCGTGAAAAGGAAGA
AAAGCACGAGCACACATACACAACACACACACACCC back to topCoding sequence (CDS) from alignment at scaffold_19:322420..325355+ >mRNA_7359 ID=mRNA_7359|Name=jgi.p|Nanoce1779_2|132257|organism=Nannochloropsis oceanica|type=CDS|length=3834bp|location=Sequence derived from alignment at scaffold_19:322420..325355+ (Nannochloropsis oceanica) ATGAAAAAGATCACATATTTCGCCTCGCCCCGCACTGACAGCATCGGCGG GGACAGCGCCAAGAAGCAGAGGAAACCATCCTTCTCTCTCGCCCCTACCT CCGGTACCACCCCCAGAGGCAATGAAAGCTTGGACTTAACGGCCGACGTC CGTGAAGTCCTCTACGACGGAGGCAACAGCCATAGCAACCACAATATCAA CAGTAGCATCAGTCCCCGCAGCATCAATAGCCCCCGCAAGCTCCCTCCTG CCTTGACCAGCATTGCCTCCCCTCCTTCCCCCCCCTCTCCTAAGGAAAAA CGCGGCAAGATCGACTTCTCTCTGCTCAGCTCCTTGTCACCCGGTCGGAA GAAAAGCAGCACTAGCTGCTGCAGCCGTAGCAGCAGTAATAGCAGCCCAA CCATTACCCTCAAGGCTGCCACTTCTAGCGCTCCCGCTGGTGCGGGGAAT CTGACCGACCAAATGCCTTCCTCCCCTGTCTCCTTCCTCCCCACTTTCAA CAGTATTACACACCCCTCCTCCTCCTTTGTACCCGCTGGAGGCACCCCAC CCAATACTGCCCGCTCTCCTCGCACTCACAGTAATACCGCTGCCACCATC CTTTCCTCCCCTTCCTCCTCCTCCTCCTCCACCCGCTCTCCACACCGCCA GCGCGCAGAGGGTCTCAGGGGACTTCTTGGTTACTCCTCCCCCTCCCCCC CCTCCGACTCCCCCATCCACCTCGCTGCCCGTCAAGGCGATATCTCTCTC CTTCAGACTCTTCTTGCCTCCAACCCCTCCTTAGCTGCTGCCTTGGGACA TGCCTCAGTGACACCCTTAATGCTCGCCGCTGGAGCAGGAGAGGAAGAGA CCGTGAAATTCTTGCTAGATCTAGGGAGGGAAGGAGAGAAGAGTGGACGG GTGCTAGTGGATGTTCTCAAGAGTGATGCAGGAAAGAAGACAGCACTGCA TCATGCGGCCATGGGAAACTTAGATTCGCCTGGAGTGGCACTGCTGCTCC TTGGGAAGCAGCAGCAGCATCAACAGTTGTTAGAAGCTGTGGACGTCGAG GGGAGGACGGCGTTGCACTACGCTGCTGTCAACGGACATTTAAAAATGCT ACGTGTGTTGTTAAGTGGAGAGAAGGGGGGAGTAAGTCCTCTTTCCTTGG TGATGGATAATGAGGGTTTGGACCCGCTACAATTTTTGTTGTCCAAAGTA GGAGGAGAGGGTGGCAAGATGTCGGCGGCGCATCGCACGGAAGTGGTCCG TACATTGCAGGACGCACAGGAGCGGGCGAAAAGGAAGAGCAACAGTAACA GCAGTGGGGATGGGAATGAGATGGAGGGCAGGAGTCCGGGGTGGGGGGGT GCGACGACGTGTGTATGGGATTGTGTGGCCCGCTTGTGTGGGGAGGCAGT GGCAGACGCGGAGGACGAGGAAGAGGAAGAAATCGTGCAGCCGATTGAAC ACCAGCTCCTCCGAATTTTCCGCGCTGCAGATATCTCTCAAGAAGCCAGT GACGTGTATCTAGATAACCTTCGCCGTCACGGCTACGATAACTTAATTTC CCTTCATGCCATCGCCGCCGATCGCTTCAAAATGACCTTAGGGAAATACG TCCCCGACCGGCAAGACCGCAAAAGAATCCTCAAAGCCCTTCATGATGAT GACGGGAATGGAAGTGGTCACATTTGTTCCAACCTCAAGCACTTACCTGT TGGAGAGTATCTAAAGCATCTATTAAGTGTGCCTGATGAGATGGCGGGGC GTTACGCAGAGGGCTTGGGAGGGATGAACGTGCACACGGGCGCTCAGTTG TGTCAGGCATCCTACGATGAAGTAGAGTTGAATTTGGCTGGGATCTTATT GCAAGGGCACAAAAAGGCGTTGAAGATTTTATTGAAGACAAGCGCAGCAG CGTCGCCGCTAGCATAGATGAAAAAGATCACATATTTCGCCTCGCCCCGC ACTGACAGCATCGGCGGGGACAGCGCCAAGAAGCAGAGGAAACCATCCTT CTCTCTCGCCCCTACCTCCGGTACCACCCCCAGAGGCAATGAAAGCTTGG ACTTAACGGCCGACGTCCGTGAAGTCCTCTACGACGGAGGCAACAGCCAT AGCAACCACAATATCAACAGTAGCATCAGTCCCCGCAGCATCAATAGCCC CCGCAAGCTCCCTCCTGCCTTGACCAGCATTGCCTCCCCTCCTTCCCCCC CCTCTCCTAAGGAAAAACGCGGCAAGATCGACTTCTCTCTGCTCAGCTCC TTGTCACCCGGTCGGAAGAAAAGCAGCACTAGCTGCTGCAGCCGTAGCAG CAGTAATAGCAGCCCAACCATTACCCTCAAGGCTGCCACTTCTAGCGCTC CCGCTGGTGCGGGGAATCTGACCGACCAAATGCCTTCCTCCCCTGTCTCC TTCCTCCCCACTTTCAACAGTATTACACACCCCTCCTCCTCCTTTGTACC CGCTGGAGGCACCCCACCCAATACTGCCCGCTCTCCTCGCACTCACAGTA ATACCGCTGCCACCATCCTTTCCTCCCCTTCCTCCTCCTCCTCCTCCACC CGCTCTCCACACCGCCAGCGCGCAGAGGGTCTCAGGGGACTTCTTGGTTA CTCCTCCCCCTCCCCCCCCTCCGACTCCCCCATCCACCTCGCTGCCCGTC AAGGCGATATCTCTCTCCTTCAGACTCTTCTTGCCTCCAACCCCTCCTTA GCTGCTGCCTTGGGACATGCCTCAGTGACACCCTTAATGCTCGCCGCTGG AGCAGGAGAGGAAGAGACCGTGAAATTCTTGCTAGATCTAGGGAGGGAAG GAGAGAAGAGTGGACGGGTGCTAGTGGATGTTCTCAAGAGTGATGCAGGA AAGAAGACAGCACTGCATCATGCGGCCATGGGAAACTTAGATTCGCCTGG AGTGGCACTGCTGCTCCTTGGGAAGCAGCAGCAGCATCAACAGTTGTTAG AAGCTGTGGACGTCGAGGGGAGGACGGCGTTGCACTACGCTGCTGTCAAC GGACATTTAAAAATGCTACGTGTGTTGTTAAGTGGAGAGAAGGGGGGAGT AAGTCCTCTTTCCTTGGTGATGGATAATGAGGGTTTGGACCCGCTACAAT TTTTGTTGTCCAAAGTAGGAGGAGAGGGTGGCAAGATGTCGGCGGCGCAT CGCACGGAAGTGGTCCGTACATTGCAGGACGCACAGGAGCGGGCGAAAAG GAAGAGCAACAGTAACAGCAGTGGGGATGGGAATGAGATGGAGGGCAGGA GTCCGGGGTGGGGGGGTGCGACGACGTGTGTATGGGATTGTGTGGCCCGC TTGTGTGGGGAGGCAGTGGCAGACGCGGAGGACGAGGAAGAGGAAGAAAT CGTGCAGCCGATTGAACACCAGCTCCTCCGAATTTTCCGCGCTGCAGATA TCTCTCAAGAAGCCAGTGACGTGTATCTAGATAACCTTCGCCGTCACGGC TACGATAACTTAATTTCCCTTCATGCCATCGCCGCCGATCGCTTCAAAAT GACCTTAGGGAAATACGTCCCCGACCGGCAAGACCGCAAAAGAATCCTCA AAGCCCTTCATGATGATGACGGGAATGGAAGTGGTCACATTTGTTCCAAC CTCAAGCACTTACCTGTTGGAGAGTATCTAAAGCATCTATTAAGTGTGCC TGATGAGATGGCGGGGCGTTACGCAGAGGGCTTGGGAGGGATGAACGTGC ACACGGGCGCTCAGTTGTGTCAGGCATCCTACGATGAAGTAGAGTTGAAT TTGGCTGGGATCTTATTGCAAGGGCACAAAAAGGCGTTGAAGATTTTATT GAAGACAAGCGCAGCAGCGTCGCCGCTAGCATAG back to top
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