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Properties
| Property Name | Value |
|---|
| TranscriptId | 598490 |
| Track | FilteredModels2 |
| ProteinId | 598404 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_19 | supercontig | scaffold_19:296411..298741 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7350 ID=mRNA_7350|Name=jgi.p|Nanoce1779_2|598404|organism=Nannochloropsis oceanica|type=mRNA|length=2005bp
CAACAGCAACAGGACATGCAGAGGGATACTTTGCCCAAACGATACACGCA
TATGCACACTCCTTAGGCCTTTTTCTTCACAAAAAACACAGCAAGCAATC
ATGCTTGTTCAATTACGGGAAGCTACGGTCCTCGCTGCCGTCCTTTTGGG
CGCTTGGAGTGCTCAAGCCTTCATCCCGCGCATGCCCGCGGCCGCCTTGC
ATCAGCAGCAGCACCAGCAGCAGCGATGCGGGTCGTCCCTCTACTCCACA
GTATCGGATAACGTCCAGACCACAGTCGAAAAACGCGCAAACTCCTCCGT
CGGCCTCTTTGTCACCGTTCCGGGCACTCTCACTCGCAAGGCCTACGACC
AAGCTTGCAAACGCATGGTCGAAGAATCCAAACACGCCATCCCTGGCTTC
CGAAAAGGCCAACGCGTTCCGGAGCATATCCTGCTCAACGCCGTGGGTGG
CCCCCAAGTTATCATCAATGAAGCCCTGGACATCCTCTGTGAGGACGCCC
TGAAAACAGCAATCGACGAGTCAGATGTGAAAGCCGTTGGACAGGCCTCG
CTCGTCTCCCACCCCGAGACACTCATCGGACTCTTCAAGCCCGGCGAGCC
TATCGTTATGGAACTCACCGTGGACGTCTACCCGGAAGTAACATTCACTT
CCTCCTACAAAGGCCTCAAAATCACCGCCGAGCGTATTCCACTGGAAAAC
GAAAAGGTCAAACAGGCGCTGGATGCCTTGCGTAAGAAACGCGTGCGTCT
GGTCGAGACCCCGTCTGACTACGTTGCCAAGCTCGAGGACAGCGCCATCG
TGAACATGAAGGCCTATCAAATGCTTTCCGACGGTACACGTGGCCCGGAA
ATGCGCAATATCGCAGCAGGGGAAGAAGTAGAGGTCATTCTCGAAGAGGG
GCGTTTCTTGCCCGGAGTGGTGGAAGGTCTAGTGGGCACACGGGCGGGAG
ACAAGGTAACGGTTCCCGTTACATTCCCGGACAACATCCGCGACACGAAG
CTGGCAGGTCTGAAGGCGGAGTTCGATATAGAAGTGGTGAGCCTGAAGAA
CAGGGTGATTCCAGAAATCGACGAACAGTTTGCGGCGGACATTCGGGAGG
GCCTGACCCCGGAAGGGATCAAGCAAGAGGTGGTGGATGCTGTCAATGCC
GATGCGGAGGAACGCACAAAGATGAATCGGAACAAGGCCTTGGAATCGGC
CCTTCTGGAAATCACTCAGGCGGAGATTCCCGAGTGTTGGATCCAAGAGG
AGACTCGGAGGAAATTTGCCTTGATGATGCAGGAGGTCTCGACGCAGGGC
AAGTCGGAGGAAGAGGTGAAGAAAATGATTACCAAAGAGAATTTCGAAAA
GTACCGGGAAATTGCCTTGCCGGGAACGATCAAGACATTAATGTTGGGCG
TTGCCACAGCGAAGGTCGCGGAGGAGGAGGCGCTGGAAGTGGACCCGCTG
GAATTGCAGGATCAGATTGACCTGAGGAAATTGGAGGCGGAGAGGTCGGG
GATGGATGAGAAAGCATTGAGGAACCAGCTTGAAGCGAAGCTGCTGGCAG
ATATGGTGTTGGACTGTCTGGCGGAAAATGCGGACATAACATATGTGGAT
GTGAAAGAGGCGTAAAGGAGGCGGGAAAGGGAGGAGGGAGTTAGGGAGGG
AGGAACGGTTGTGCTTGATAGGAAAAAAGCACAAAGGGCGAAGAGGAGGG
AGAGAGGAGGGAAGAAAAGAGAGAGAAGGAGAGGGCTAGTGTTGAGCGAC
TCTGACGACTATGAAGACGATATAGTTTTTAAGCATTAACTTACATGTTC
ATGTTTCTTCTATGAGAAAGGCGACGAGAGTGGGGAGGAGGAAGAGAGGA
GGAGGATACGGAGGAGGAGGAGAGTGAAATAAAAAGCTTGAGAATGATTG
GGTACCGTATATGTGAGAGAATAAGAGGAAAGCGAAAGACAACGCAAAAT
CAGCACAAAGAAAAGGAAAATAAAAAATCCGACGAGGCACCATATGCAAG
CCAAA back to topprotein sequence of jgi.p|Nanoce1779_2|598404 >mRNA_7350-protein ID=mRNA_7350-protein|Name=jgi.p|Nanoce1779_2|598404|organism=Nannochloropsis oceanica|type=polypeptide|length=505bp
MLVQLREATVLAAVLLGAWSAQAFIPRMPAAALHQQQHQQQRCGSSLYST
VSDNVQTTVEKRANSSVGLFVTVPGTLTRKAYDQACKRMVEESKHAIPGF
RKGQRVPEHILLNAVGGPQVIINEALDILCEDALKTAIDESDVKAVGQAS
LVSHPETLIGLFKPGEPIVMELTVDVYPEVTFTSSYKGLKITAERIPLEN
EKVKQALDALRKKRVRLVETPSDYVAKLEDSAIVNMKAYQMLSDGTRGPE
MRNIAAGEEVEVILEEGRFLPGVVEGLVGTRAGDKVTVPVTFPDNIRDTK
LAGLKAEFDIEVVSLKNRVIPEIDEQFAADIREGLTPEGIKQEVVDAVNA
DAEERTKMNRNKALESALLEITQAEIPECWIQEETRRKFALMMQEVSTQG
KSEEEVKKMITKENFEKYREIALPGTIKTLMLGVATAKVAEEEALEVDPL
ELQDQIDLRKLEAERSGMDEKALRNQLEAKLLADMVLDCLAENADITYVD
VKEA* back to topmRNA from alignment at scaffold_19:296411..298741- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7350 ID=mRNA_7350|Name=jgi.p|Nanoce1779_2|598404|organism=Nannochloropsis oceanica|type=mRNA|length=2331bp|location=Sequence derived from alignment at scaffold_19:296411..298741- (Nannochloropsis oceanica)
CAACAGCAACAGGACATGCAGAGGGATACTTTGCCCAAACGATACACGCA
TATGCACACTCCTTAGGCCTTTTTCTTCACAAAAAACACAGCAAGCAATC
ATGCTTGTTCAATTACGGGAAGCTACGGTCCTCGCTGCCGTCCTTTTGGG
CGCTTGGAGTGCTCAAGCCTTCATCCCGCGCATGCCCGCGGCCGCCTTGC
ATCAGCAGCAGCACCAGCAGCAGCGATGCGGGTCGTCCCTCTACTCCACA
GTATCGGATAACGTCCAGACCACGTAAGTATCAAATTGAGAAAGGAGGGG
ACGTAAACTTTGCGTGGTTGTGGGGGCGGCATGGGATGGATGTAGTACTG
ATGTGTCAAATCACTGCCAAGTTGTACTTGACTAATCCTCATCTCCCACC
ACCGCCATTACGACTGTTGCACGTCTATCTTGTATATCTAACGAAATCTT
TGCGCACACATGCATACGCATGCATATGCGCATTATATAGACTCGCCCCT
TCTCCTCTTGTCTTTGTAGACAAGCCAAACTAGCCCTTTCTTCACGCACT
CATCTCTTCCTCCCTGCCCCCTTCCCTCCCGCCCACCTCTCATTAACAGA
GTCGAAAAACGCGCAAACTCCTCCGTCGGCCTCTTTGTCACCGTTCCGGG
CACTCTCACTCGCAAGGCCTACGACCAAGCTTGCAAACGCATGGTCGAAG
AATCCAAACACGCCATCCCTGGCTTCCGAAAAGGCCAACGCGTTCCGGAG
CATATCCTGCTCAACGCCGTGGGTGGCCCCCAAGTTATCATCAATGAAGC
CCTGGACATCCTCTGTGAGGACGCCCTGAAAACAGCAATCGACGAGTCAG
ATGTGAAAGCCGTTGGACAGGCCTCGCTCGTCTCCCACCCCGAGACACTC
ATCGGACTCTTCAAGCCCGGCGAGCCTATCGTTATGGAACTCACCGTGGA
CGTCTACCCGGAAGTAACATTCACTTCCTCCTACAAAGGCCTCAAAATCA
CCGCCGAGCGTATTCCACTGGAAAACGAAAAGGTCAAACAGGCGCTGGAT
GCCTTGCGTAAGAAACGCGTGCGTCTGGTCGAGACCCCGTCTGACTACGT
TGCCAAGCTCGAGGACAGCGCCATCGTGAACATGAAGGCCTATCAAATGC
TTTCCGACGGTACACGTGGCCCGGAAATGCGCAATATCGCAGCAGGGGAA
GAAGTAGAGGTCATTCTCGAAGAGGGGCGTTTCTTGCCCGGAGTGGTGGA
AGGTCTAGTGGGCACACGGGCGGGAGACAAGGTAACGGTTCCCGTTACAT
TCCCGGACAACATCCGCGACACGAAGCTGGCAGGTCTGAAGGCGGAGTTC
GATATAGAAGTGGTGAGCCTGAAGAACAGGGTGATTCCAGAAATCGACGA
ACAGTTTGCGGCGGACATTCGGGAGGGCCTGACCCCGGAAGGGATCAAGC
AAGAGGTGGTGGATGCTGTCAATGCCGATGCGGAGGAACGCACAAAGATG
AATCGGAACAAGGCCTTGGAATCGGCCCTTCTGGAAATCACTCAGGCGGA
GATTCCCGAGTGTTGGATCCAAGAGGAGACTCGGAGGAAATTTGCCTTGA
TGATGCAGGAGGTCTCGACGCAGGGCAAGTCGGAGGAAGAGGTGAAGAAA
ATGATTACCAAAGAGAATTTCGAAAAGTACCGGGAAATTGCCTTGCCGGG
AACGATCAAGACATTAATGTTGGGCGTTGCCACAGCGAAGGTCGCGGAGG
AGGAGGCGCTGGAAGTGGACCCGCTGGAATTGCAGGATCAGATTGACCTG
AGGAAATTGGAGGCGGAGAGGTCGGGGATGGATGAGAAAGCATTGAGGAA
CCAGCTTGAAGCGAAGCTGCTGGCAGATATGGTGTTGGACTGTCTGGCGG
AAAATGCGGACATAACATATGTGGATGTGAAAGAGGCGTAAAGGAGGCGG
GAAAGGGAGGAGGGAGTTAGGGAGGGAGGAACGGTTGTGCTTGATAGGAA
AAAAGCACAAAGGGCGAAGAGGAGGGAGAGAGGAGGGAAGAAAAGAGAGA
GAAGGAGAGGGCTAGTGTTGAGCGACTCTGACGACTATGAAGACGATATA
GTTTTTAAGCATTAACTTACATGTTCATGTTTCTTCTATGAGAAAGGCGA
CGAGAGTGGGGAGGAGGAAGAGAGGAGGAGGATACGGAGGAGGAGGAGAG
TGAAATAAAAAGCTTGAGAATGATTGGGTACCGTATATGTGAGAGAATAA
GAGGAAAGCGAAAGACAACGCAAAATCAGCACAAAGAAAAGGAAAATAAA
AAATCCGACGAGGCACCATATGCAAGCCAAA back to topCoding sequence (CDS) from alignment at scaffold_19:296411..298741- >mRNA_7350 ID=mRNA_7350|Name=jgi.p|Nanoce1779_2|598404|organism=Nannochloropsis oceanica|type=CDS|length=3030bp|location=Sequence derived from alignment at scaffold_19:296411..298741- (Nannochloropsis oceanica)
AGTCGAAAAACGCGCAAACTCCTCCGTCGGCCTCTTTGTCACCGTTCCGG
GCACTCTCACTCGCAAGGCCTACGACCAAGCTTGCAAACGCATGGTCGAA
GAATCCAAACACGCCATCCCTGGCTTCCGAAAAGGCCAACGCGTTCCGGA
GCATATCCTGCTCAACGCCGTGGGTGGCCCCCAAGTTATCATCAATGAAG
CCCTGGACATCCTCTGTGAGGACGCCCTGAAAACAGCAATCGACGAGTCA
GATGTGAAAGCCGTTGGACAGGCCTCGCTCGTCTCCCACCCCGAGACACT
CATCGGACTCTTCAAGCCCGGCGAGCCTATCGTTATGGAACTCACCGTGG
ACGTCTACCCGGAAGTAACATTCACTTCCTCCTACAAAGGCCTCAAAATC
ACCGCCGAGCGTATTCCACTGGAAAACGAAAAGGTCAAACAGGCGCTGGA
TGCCTTGCGTAAGAAACGCGTGCGTCTGGTCGAGACCCCGTCTGACTACG
TTGCCAAGCTCGAGGACAGCGCCATCGTGAACATGAAGGCCTATCAAATG
CTTTCCGACGGTACACGTGGCCCGGAAATGCGCAATATCGCAGCAGGGGA
AGAAGTAGAGGTCATTCTCGAAGAGGGGCGTTTCTTGCCCGGAGTGGTGG
AAGGTCTAGTGGGCACACGGGCGGGAGACAAGGTAACGGTTCCCGTTACA
TTCCCGGACAACATCCGCGACACGAAGCTGGCAGGTCTGAAGGCGGAGTT
CGATATAGAAGTGGTGAGCCTGAAGAACAGGGTGATTCCAGAAATCGACG
AACAGTTTGCGGCGGACATTCGGGAGGGCCTGACCCCGGAAGGGATCAAG
CAAGAGGTGGTGGATGCTGTCAATGCCGATGCGGAGGAACGCACAAAGAT
GAATCGGAACAAGGCCTTGGAATCGGCCCTTCTGGAAATCACTCAGGCGG
AGATTCCCGAGTGTTGGATCCAAGAGGAGACTCGGAGGAAATTTGCCTTG
ATGATGCAGGAGGTCTCGACGCAGGGCAAGTCGGAGGAAGAGGTGAAGAA
AATGATTACCAAAGAGAATTTCGAAAAGTACCGGGAAATTGCCTTGCCGG
GAACGATCAAGACATTAATGTTGGGCGTTGCCACAGCGAAGGTCGCGGAG
GAGGAGGCGCTGGAAGTGGACCCGCTGGAATTGCAGGATCAGATTGACCT
GAGGAAATTGGAGGCGGAGAGGTCGGGGATGGATGAGAAAGCATTGAGGA
ACCAGCTTGAAGCGAAGCTGCTGGCAGATATGGTGTTGGACTGTCTGGCG
GAAAATGCGGACATAACATATGTGGATGTGAAAGAGGCGTAAATGCTTGT
TCAATTACGGGAAGCTACGGTCCTCGCTGCCGTCCTTTTGGGCGCTTGGA
GTGCTCAAGCCTTCATCCCGCGCATGCCCGCGGCCGCCTTGCATCAGCAG
CAGCACCAGCAGCAGCGATGCGGGTCGTCCCTCTACTCCACAGTATCGGA
TAACGTCCAGACCACAGTCGAAAAACGCGCAAACTCCTCCGTCGGCCTCT
TTGTCACCGTTCCGGGCACTCTCACTCGCAAGGCCTACGACCAAGCTTGC
AAACGCATGGTCGAAGAATCCAAACACGCCATCCCTGGCTTCCGAAAAGG
CCAACGCGTTCCGGAGCATATCCTGCTCAACGCCGTGGGTGGCCCCCAAG
TTATCATCAATGAAGCCCTGGACATCCTCTGTGAGGACGCCCTGAAAACA
GCAATCGACGAGTCAGATGTGAAAGCCGTTGGACAGGCCTCGCTCGTCTC
CCACCCCGAGACACTCATCGGACTCTTCAAGCCCGGCGAGCCTATCGTTA
TGGAACTCACCGTGGACGTCTACCCGGAAGTAACATTCACTTCCTCCTAC
AAAGGCCTCAAAATCACCGCCGAGCGTATTCCACTGGAAAACGAAAAGGT
CAAACAGGCGCTGGATGCCTTGCGTAAGAAACGCGTGCGTCTGGTCGAGA
CCCCGTCTGACTACGTTGCCAAGCTCGAGGACAGCGCCATCGTGAACATG
AAGGCCTATCAAATGCTTTCCGACGGTACACGTGGCCCGGAAATGCGCAA
TATCGCAGCAGGGGAAGAAGTAGAGGTCATTCTCGAAGAGGGGCGTTTCT
TGCCCGGAGTGGTGGAAGGTCTAGTGGGCACACGGGCGGGAGACAAGGTA
ACGGTTCCCGTTACATTCCCGGACAACATCCGCGACACGAAGCTGGCAGG
TCTGAAGGCGGAGTTCGATATAGAAGTGGTGAGCCTGAAGAACAGGGTGA
TTCCAGAAATCGACGAACAGTTTGCGGCGGACATTCGGGAGGGCCTGACC
CCGGAAGGGATCAAGCAAGAGGTGGTGGATGCTGTCAATGCCGATGCGGA
GGAACGCACAAAGATGAATCGGAACAAGGCCTTGGAATCGGCCCTTCTGG
AAATCACTCAGGCGGAGATTCCCGAGTGTTGGATCCAAGAGGAGACTCGG
AGGAAATTTGCCTTGATGATGCAGGAGGTCTCGACGCAGGGCAAGTCGGA
GGAAGAGGTGAAGAAAATGATTACCAAAGAGAATTTCGAAAAGTACCGGG
AAATTGCCTTGCCGGGAACGATCAAGACATTAATGTTGGGCGTTGCCACA
GCGAAGGTCGCGGAGGAGGAGGCGCTGGAAGTGGACCCGCTGGAATTGCA
GGATCAGATTGACCTGAGGAAATTGGAGGCGGAGAGGTCGGGGATGGATG
AGAAAGCATTGAGGAACCAGCTTGAAGCGAAGCTGCTGGCAGATATGGTG
TTGGACTGTCTGGCGGAAAATGCGGACATAACATATGTGGATGTGAAAGA
GGCGTAAATGCTTGTTCAATTACGGGAAGCTACGGTCCTCGCTGCCGTCC
TTTTGGGCGCTTGGAGTGCTCAAGCCTTCATCCCGCGCATGCCCGCGGCC
GCCTTGCATCAGCAGCAGCACCAGCAGCAGCGATGCGGGTCGTCCCTCTA
CTCCACAGTATCGGATAACGTCCAGACCAC back to top
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