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Properties
| Property Name | Value |
|---|
| TranscriptId | 626114 |
| Track | FilteredModels2 |
| ProteinId | 626028 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_19 | supercontig | scaffold_19:283423..285647 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7346 ID=mRNA_7346|Name=jgi.p|Nanoce1779_2|626028|organism=Nannochloropsis oceanica|type=mRNA|length=1853bp
GCACCACCGAGAGCCGCACGTAGAGAGCCACCTCACTTCCGATTCCCACT
CACACTACATGGACACGCAAGTCCAAGGTACATCGAAAGCACAAGCACAT
TACTACGTGCTTGTGCTCTTTCCTGCACCTTGTGGTCATAATCCCCGTCA
TTGACCTTGTCCTTTCCTTCCACACCTGACTAGGCTACTCTCTTACTCCT
TCGAGGAGCAGCAGCAGCAGCAGCGGCGGCAGCAAGGAGCTACAGCAACT
ACAGCAAGCGGCGATTACTAGTACTTCCATCATAGCAACAGGAGTTTCAG
CAGCCAATATGAGAAAACAACAAAGACCAGTTGACGGCCCCGCCGTCCCG
TCCCTGCTACTCCTCAGCCTCCTCCTGGGCTCCTTCCACCAAAGCACCGC
CTTCCTCCCCTCTTCTAACCTCCGCTTCTTCTCCTCCTCCTCCTCCTCTT
CCTCGTACAATTCCTATCTCCAACCATTCATTTCCCTCCTCCCCTCCTAC
TCCTCCCCTTCTCCGTCCCTCCGTCCCTCGACCCGCCTCTACGCCTCGTC
CCTCCCCCGCGACTACTACGAGCGCCTCGGTGTCACCCGTGCTGCCAAGC
GCGAAGAAATCAAAAAAGCCTATAGAAAACTCGCATTGAAGTACCACCCC
GACGTGTGTAAAGAAGAAGATGCTTCCGAGAAATTCAAGGAGGTAAAAGA
GGCGTATGAGGCCCTGATTGATGATCAGAAGAGACAGATGGGGGAGGGAG
GGGGGGGAGGGAGGGGGGGGCCGGGGGCAGCGGGACCCGGGGCGAGGAGG
AGGACAGCAGGGCCTCGGGCGGGGGATGATTTGCGGGTGGACTTGAGCAT
CCCGTTGAGGACGAGTGTGTTTGGGGGTCAGGAGAAGCTCCGAATCAACC
ACTTGGAGACATGTGGGACGTGCACGGGCTCGGGTGTCAAGCCCGGGAGC
AAGGTAAACACGTGTAAGACCTGCCGTGGCAGCGGCGTAGTTACCCAGGT
GACTCGCACGCCTCTAGGGAACTTCCAGACCCAGAGTGTGTGTCCGGAAT
GCGGGGGGGCTGGCCAGGTGGTTGAAGAGTACTGTGGTACCTGCTCGGGG
CAAGGACGATTGGAGAAGACAAAGCAGATTAAGGTTGACATACCAGCGGG
GGTGAATGACGGGCAGAAGCTGCGCGTGAAGGGGGAGGGGGACGCGGGGG
CCAAGGGGGGGGAGAATGGGGACCTGTATATCTTCATCGGGGTAGAGAAA
GACCCGGTGTTTCGGAGGGACGGGACGGACATTTATTCGGACATAAAAGT
CAGTTACATCGATGCCATTCTGGGGACCAAAGTGAAGGTGGGCGTGATTG
ACGGGGATGCGGAGATTGCAATCAAGGAAGGGACGCAGGCCGGGGCGGTG
TTGAGATTGAAGGGGCGGGGGGTGCCTAAGTTGATGAGCGGCGAGGGGGG
GGCACGGGGGGATCATTACTTTACGGTGGGCGTTGAGATCCCCACGACCT
TGTCGGAGGAAGAGAGGGAGCTGGTGGAGGGTTTGAGGAAGGAGAGAAAG
GAGAAGGCGAAGGGGGACGGGGAGGGGAAGGGAGGCTTCTTCAATTTCAT
ATGATGAGGGGGGAGGAGGGAGAGGGGAGGGGGGGGAGGAGAAACTAGGA
TGTGGTTTGAAAAGGACGAATGACGATAAATATGTGATGAGGACGACTCT
GAGGAGGAGGAGGAAGAGATGGAGGTCCAAAGGGACAGAACGGGAGAGTA
CAAGAAAACAGGGGAGGGGTTGAGGGAGGGGATTAGAGGGCCACAGGCGT
GGATTGAGTCGGGAAAGCAATGAAAGTTAAAAAAACACGTGATCTGAATC
AAC back to topprotein sequence of jgi.p|Nanoce1779_2|626028 >mRNA_7346-protein ID=mRNA_7346-protein|Name=jgi.p|Nanoce1779_2|626028|organism=Nannochloropsis oceanica|type=polypeptide|length=432bp
MRKQQRPVDGPAVPSLLLLSLLLGSFHQSTAFLPSSNLRFFSSSSSSSSY
NSYLQPFISLLPSYSSPSPSLRPSTRLYASSLPRDYYERLGVTRAAKREE
IKKAYRKLALKYHPDVCKEEDASEKFKEVKEAYEALIDDQKRQMGEGGGG
GRGGPGAAGPGARRRTAGPRAGDDLRVDLSIPLRTSVFGGQEKLRINHLE
TCGTCTGSGVKPGSKVNTCKTCRGSGVVTQVTRTPLGNFQTQSVCPECGG
AGQVVEEYCGTCSGQGRLEKTKQIKVDIPAGVNDGQKLRVKGEGDAGAKG
GENGDLYIFIGVEKDPVFRRDGTDIYSDIKVSYIDAILGTKVKVGVIDGD
AEIAIKEGTQAGAVLRLKGRGVPKLMSGEGGARGDHYFTVGVEIPTTLSE
EERELVEGLRKERKEKAKGDGEGKGGFFNFI* back to topmRNA from alignment at scaffold_19:283423..285647- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7346 ID=mRNA_7346|Name=jgi.p|Nanoce1779_2|626028|organism=Nannochloropsis oceanica|type=mRNA|length=2225bp|location=Sequence derived from alignment at scaffold_19:283423..285647- (Nannochloropsis oceanica)
GCACCACCGAGAGCCGCACGTAGAGAGCCACCTCACTTCCGATTCCCACT
CACACTACATGGACACGCAAGTCCAAGGTACATCGAAAGCACAAGCACAT
TACTACGTGCTTGTGCTCTTTCCTGCACCTTGTGGTCATAATCCCCGTCA
TTGACCTTGTCCTTTCCTTCCACACCTGACTAGGCTACTCTCTTACTCCT
TCGAGGAGCAGCAGCAGCAGCAGCGGCGGCAGCAAGGAGCTACAGCAACT
ACAGCAAGCGGCGATTACTAGTACTTCCATCATAGCAACAGGAGTTTCAG
CAGCCAATATGAGAAAACAACAAAGACCAGTTGACGGCCCCGCCGTCCCG
TCCCTGCTACTCCTCAGCCTCCTCCTGGGCTCCTTCCACCAAAGCACCGC
CTTCCTCCCCTCTTCTAACCTCCGCTTCTTCTCCTCCTCCTCCTCCTCTT
CCTCGTACAATTCCTATCTCCAACCATTCATTTCCCTCCTCCCCTCCTAC
TCCTCCCCTTCTCCGTCCCTCCGTCCCTCGACCCGCCTCTACGCCTCGTC
CCTCCCCCGCGACTACTACGAGCGCCTCGGTGTCACCCGTGCTGCCAAGC
GCGAAGAAATCAAAAAAGCCTATAGAAAACTCGCATTGAAGTACCACCCC
GACGTGTGTAAAGAAGAAGATGCTTCCGAGAAATTCAAGGAGGTAAAAGA
GGCGTATGAGGCCCTGATTGATGATCAGAAGAGACAGATGTACGACCAAT
TTGGGGAGGCAGGGGTGAAACGAGGGGCCGGCGGAGGAGGAGGGTCTCCT
TTCGGTGGCGCGGGCTTTGGAGGGGAGGTTGACTTGGGTGATATTTTTGA
GACCTTTTTCGGGGGGCAGGGGGGAGGGAGGGGGGGGAGGGAGGGGGGGG
CCGGGGGCAGCGGGACCCGGGGCGAGGAGGAGGACAGCAGGGCCTCGGGC
GGGGGATGATTTGCGGGTGGACTTGAGCATCCCGTTGAGGACGAGTGTGT
TTGGGGGTCAGGAGAAGCTCCGAATCAACCACTTGGAGACATGTGGGACG
TGCACGGTGAGGAGGGAAAGATGGATGGGGGGAGGGAGGGAAAGAGGGAG
GGAGGGAAAGAGGGAGGGTGAGTGGGTGTGCCGATTGGATGTGGATGTGA
ATATGGTAGTTGGTGGGTGGGTCGATGTATTTCATGAGCTCAAATTAAGT
AAAAGAAACATGGTAATGAGAAAAACCAAAAGAAATCTACGTGCTCACTC
ACCAATCTTATGTTTTCCTCTCCCGCTCTTTCTTCTACCTACCCACAGGG
CTCGGGTGTCAAGCCCGGGAGCAAGGTAAACACGTGTAAGACCTGCCGTG
GCAGCGGCGTAGTTACCCAGGTGACTCGCACGCCTCTAGGGAACTTCCAG
ACCCAGAGTGTGTGTCCGGAATGCGGGGGGGCTGGCCAGGTGGTTGAAGA
GTACTGTGGTACCTGCTCGGGGCAAGGACGATTGGAGAAGACAAAGCAGA
TTAAGGTTGACATACCAGCGGGGGTGAATGACGGGCAGAAGCTGCGCGTG
AAGGGGGAGGGGGACGCGGGGGCCAAGGGGGGGGAGAATGGGGACCTGTA
TATCTTCATCGGGGTAGAGAAAGACCCGGTGTTTCGGAGGGACGGGACGG
ACATTTATTCGGACATAAAAGTCAGTTACATCGATGCCATTCTGGGGACC
AAAGTGAAGGTGGGCGTGATTGACGGGGATGCGGAGATTGCAATCAAGGA
AGGGACGCAGGCCGGGGCGGTGTTGAGATTGAAGGGGCGGGGGGTGCCTA
AGTTGATGAGCGGCGAGGGGGGGGCACGGGGGGATCATTACTTTACGGTG
GGCGTTGAGATCCCCACGACCTTGTCGGAGGAAGAGAGGGAGCTGGTGGA
GGGTTTGAGGAAGGAGAGAAAGGAGAAGGCGAAGGGGGACGGGGAGGGGA
AGGGAGGCTTCTTCAATTTCATATGATGAGGGGGGAGGAGGGAGAGGGGA
GGGGGGGGAGGAGAAACTAGGATGTGGTTTGAAAAGGACGAATGACGATA
AATATGTGATGAGGACGACTCTGAGGAGGAGGAGGAAGAGATGGAGGTCC
AAAGGGACAGAACGGGAGAGTACAAGAAAACAGGGGAGGGGTTGAGGGAG
GGGATTAGAGGGCCACAGGCGTGGATTGAGTCGGGAAAGCAATGAAAGTT
AAAAAAACACGTGATCTGAATCAAC back to topCoding sequence (CDS) from alignment at scaffold_19:283423..285647- >mRNA_7346 ID=mRNA_7346|Name=jgi.p|Nanoce1779_2|626028|organism=Nannochloropsis oceanica|type=CDS|length=3888bp|location=Sequence derived from alignment at scaffold_19:283423..285647- (Nannochloropsis oceanica)
GGCTCGGGTGTCAAGCCCGGGAGCAAGGTAAACACGTGTAAGACCTGCCG
TGGCAGCGGCGTAGTTACCCAGGTGACTCGCACGCCTCTAGGGAACTTCC
AGACCCAGAGTGTGTGTCCGGAATGCGGGGGGGCTGGCCAGGTGGTTGAA
GAGTACTGTGGTACCTGCTCGGGGCAAGGACGATTGGAGAAGACAAAGCA
GATTAAGGTTGACATACCAGCGGGGGTGAATGACGGGCAGAAGCTGCGCG
TGAAGGGGGAGGGGGACGCGGGGGCCAAGGGGGGGGAGAATGGGGACCTG
TATATCTTCATCGGGGTAGAGAAAGACCCGGTGTTTCGGAGGGACGGGAC
GGACATTTATTCGGACATAAAAGTCAGTTACATCGATGCCATTCTGGGGA
CCAAAGTGAAGGTGGGCGTGATTGACGGGGATGCGGAGATTGCAATCAAG
GAAGGGACGCAGGCCGGGGCGGTGTTGAGATTGAAGGGGCGGGGGGTGCC
TAAGTTGATGAGCGGCGAGGGGGGGGCACGGGGGGATCATTACTTTACGG
TGGGCGTTGAGATCCCCACGACCTTGTCGGAGGAAGAGAGGGAGCTGGTG
GAGGGTTTGAGGAAGGAGAGAAAGGAGAAGGCGAAGGGGGACGGGGAGGG
GAAGGGAGGCTTCTTCAATTTCATATGAGGGGGAGGGAGGGGGGGGAGGG
AGGGGGGGGCCGGGGGCAGCGGGACCCGGGGCGAGGAGGAGGACAGCAGG
GCCTCGGGCGGGGGATGATTTGCGGGTGGACTTGAGCATCCCGTTGAGGA
CGAGTGTGTTTGGGGGTCAGGAGAAGCTCCGAATCAACCACTTGGAGACA
TGTGGGACGTGCACGATGAGAAAACAACAAAGACCAGTTGACGGCCCCGC
CGTCCCGTCCCTGCTACTCCTCAGCCTCCTCCTGGGCTCCTTCCACCAAA
GCACCGCCTTCCTCCCCTCTTCTAACCTCCGCTTCTTCTCCTCCTCCTCC
TCCTCTTCCTCGTACAATTCCTATCTCCAACCATTCATTTCCCTCCTCCC
CTCCTACTCCTCCCCTTCTCCGTCCCTCCGTCCCTCGACCCGCCTCTACG
CCTCGTCCCTCCCCCGCGACTACTACGAGCGCCTCGGTGTCACCCGTGCT
GCCAAGCGCGAAGAAATCAAAAAAGCCTATAGAAAACTCGCATTGAAGTA
CCACCCCGACGTGTGTAAAGAAGAAGATGCTTCCGAGAAATTCAAGGAGG
TAAAAGAGGCGTATGAGGCCCTGATTGATGATCAGAAGAGACAGATGGCT
CGGGTGTCAAGCCCGGGAGCAAGGTAAACACGTGTAAGACCTGCCGTGGC
AGCGGCGTAGTTACCCAGGTGACTCGCACGCCTCTAGGGAACTTCCAGAC
CCAGAGTGTGTGTCCGGAATGCGGGGGGGCTGGCCAGGTGGTTGAAGAGT
ACTGTGGTACCTGCTCGGGGCAAGGACGATTGGAGAAGACAAAGCAGATT
AAGGTTGACATACCAGCGGGGGTGAATGACGGGCAGAAGCTGCGCGTGAA
GGGGGAGGGGGACGCGGGGGCCAAGGGGGGGGAGAATGGGGACCTGTATA
TCTTCATCGGGGTAGAGAAAGACCCGGTGTTTCGGAGGGACGGGACGGAC
ATTTATTCGGACATAAAAGTCAGTTACATCGATGCCATTCTGGGGACCAA
AGTGAAGGTGGGCGTGATTGACGGGGATGCGGAGATTGCAATCAAGGAAG
GGACGCAGGCCGGGGCGGTGTTGAGATTGAAGGGGCGGGGGGTGCCTAAG
TTGATGAGCGGCGAGGGGGGGGCACGGGGGGATCATTACTTTACGGTGGG
CGTTGAGATCCCCACGACCTTGTCGGAGGAAGAGAGGGAGCTGGTGGAGG
GTTTGAGGAAGGAGAGAAAGGAGAAGGCGAAGGGGGACGGGGAGGGGAAG
GGAGGCTTCTTCAATTTCATATGAGGGGGAGGGAGGGGGGGGAGGGAGGG
GGGGGCCGGGGGCAGCGGGACCCGGGGCGAGGAGGAGGACAGCAGGGCCT
CGGGCGGGGGATGATTTGCGGGTGGACTTGAGCATCCCGTTGAGGACGAG
TGTGTTTGGGGGTCAGGAGAAGCTCCGAATCAACCACTTGGAGACATGTG
GGACGTGCACGATGAGAAAACAACAAAGACCAGTTGACGGCCCCGCCGTC
CCGTCCCTGCTACTCCTCAGCCTCCTCCTGGGCTCCTTCCACCAAAGCAC
CGCCTTCCTCCCCTCTTCTAACCTCCGCTTCTTCTCCTCCTCCTCCTCCT
CTTCCTCGTACAATTCCTATCTCCAACCATTCATTTCCCTCCTCCCCTCC
TACTCCTCCCCTTCTCCGTCCCTCCGTCCCTCGACCCGCCTCTACGCCTC
GTCCCTCCCCCGCGACTACTACGAGCGCCTCGGTGTCACCCGTGCTGCCA
AGCGCGAAGAAATCAAAAAAGCCTATAGAAAACTCGCATTGAAGTACCAC
CCCGACGTGTGTAAAGAAGAAGATGCTTCCGAGAAATTCAAGGAGGTAAA
AGAGGCGTATGAGGCCCTGATTGATGATCAGAAGAGACAGATGGCTCGGG
TGTCAAGCCCGGGAGCAAGGTAAACACGTGTAAGACCTGCCGTGGCAGCG
GCGTAGTTACCCAGGTGACTCGCACGCCTCTAGGGAACTTCCAGACCCAG
AGTGTGTGTCCGGAATGCGGGGGGGCTGGCCAGGTGGTTGAAGAGTACTG
TGGTACCTGCTCGGGGCAAGGACGATTGGAGAAGACAAAGCAGATTAAGG
TTGACATACCAGCGGGGGTGAATGACGGGCAGAAGCTGCGCGTGAAGGGG
GAGGGGGACGCGGGGGCCAAGGGGGGGGAGAATGGGGACCTGTATATCTT
CATCGGGGTAGAGAAAGACCCGGTGTTTCGGAGGGACGGGACGGACATTT
ATTCGGACATAAAAGTCAGTTACATCGATGCCATTCTGGGGACCAAAGTG
AAGGTGGGCGTGATTGACGGGGATGCGGAGATTGCAATCAAGGAAGGGAC
GCAGGCCGGGGCGGTGTTGAGATTGAAGGGGCGGGGGGTGCCTAAGTTGA
TGAGCGGCGAGGGGGGGGCACGGGGGGATCATTACTTTACGGTGGGCGTT
GAGATCCCCACGACCTTGTCGGAGGAAGAGAGGGAGCTGGTGGAGGGTTT
GAGGAAGGAGAGAAAGGAGAAGGCGAAGGGGGACGGGGAGGGGAAGGGAG
GCTTCTTCAATTTCATATGAGGGGGAGGGAGGGGGGGGAGGGAGGGGGGG
GCCGGGGGCAGCGGGACCCGGGGCGAGGAGGAGGACAGCAGGGCCTCGGG
CGGGGGATGATTTGCGGGTGGACTTGAGCATCCCGTTGAGGACGAGTGTG
TTTGGGGGTCAGGAGAAGCTCCGAATCAACCACTTGGAGACATGTGGGAC
GTGCACGATGAGAAAACAACAAAGACCAGTTGACGGCCCCGCCGTCCCGT
CCCTGCTACTCCTCAGCCTCCTCCTGGGCTCCTTCCACCAAAGCACCGCC
TTCCTCCCCTCTTCTAACCTCCGCTTCTTCTCCTCCTCCTCCTCCTCTTC
CTCGTACAATTCCTATCTCCAACCATTCATTTCCCTCCTCCCCTCCTACT
CCTCCCCTTCTCCGTCCCTCCGTCCCTCGACCCGCCTCTACGCCTCGTCC
CTCCCCCGCGACTACTACGAGCGCCTCGGTGTCACCCGTGCTGCCAAGCG
CGAAGAAATCAAAAAAGCCTATAGAAAACTCGCATTGAAGTACCACCCCG
ACGTGTGTAAAGAAGAAGATGCTTCCGAGAAATTCAAGGAGGTAAAAGAG
GCGTATGAGGCCCTGATTGATGATCAGAAGAGACAGAT back to top
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