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Properties
Property Name | Value |
TranscriptId | 598251 |
Track | FilteredModels2 |
ProteinId | 598165 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_19 | supercontig | scaffold_19:165771..169794 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7301 ID=mRNA_7301|Name=jgi.p|Nanoce1779_2|598165|organism=Nannochloropsis oceanica|type=mRNA|length=3788bp ACAGAGACATCAAGCCCTCCGTTCTCCTCCCACACCCTTCGCAATCATGT CTATGGGAGACTATCGCGTGGCGGACATTTCGCTTGCTGACTTCGGCCGC AAGGAGATCCAGCTTGCCGAGGTTGAAATGCCTGGTCTGATGGCTTGCCG GGAGGAATTCGGTACGGAGGCCCTCAAGGGTGCCCGCATTGCCGGCTCTT TGCATATGACCATCCAGACGGCCGTACTCATCGAGACGCTCAAGGCTATG GGCGGGGACATCCGATGGTGCTCTTGCAACATCTTCTCTACCCAGGACCA CGCCGCGGCCGCCATTGCCCGGGATGAGTCCGCTGCTGTCTTTGCCTGGA AGGGCGAGAGCCTTGAGGAGTATTGGGAGTGCACCATGAACGCCATTACG TGGCCTTCGGACGACGGTAAGGGCGACGGACCTGACCTGATCGTCGATGA CGGCGGGGACATGACTTTGCTCGTCCACGAGGGGTACAAGGCCGAGGAGC TGTACGCCAAGGACGGGACCTTGCCCGACCCTGAGTCCACGGACAATGCG GAGTTTAAGATCGTCCTGACCATCATTGCGCGTGAGCTGCCCAAGTCCCC CCAAAAGTGGCACAAGGTCGCTGCGCGCATGTTCGGTGTGTCGGAGGAGA CGACCACGGGTGTGCACCGCCTCTACCTGATGGAGAAGAACAAGACCCTA CTCTTCCCTGCCATCAACGTCAACGACTCGGTGACCAAGTCCAAATTTGA CAACTTGTATGGGTGCAAACACTCTCTCCCCGATGGCCTCATGCGCGCCA CGGACGTTATGCTTGCCGGGAAGCGCGCCGTAATCTGCGGGTATGGAGAT GTGGGGAAGGGCTGCGCGCAGGCCATGAAGGCTGCGGGCTCCATCGTATA TGTCACAGAGGTGGATCCTATCTGCGCGTTGCAGGCTGCCATGGAGGGCT TCCGTGTCGTGCGCATGAGCTCGGTGATCGGCGAGGCGGATATCATTATC ACCACGACGGGGAATAAGGGGATCATCATGGCGGAGGACATGGCCAAGAT GAAGAACAACGCCATCATTGGTAACATTGGCCACTTCGACAACGAGCTTG ACATGGACGGTGTGATGAAGATCGCCAAGCGCGAGAACATCAAGCCCCAA GTCGACCGTTTCGTCTTCCCGGACGGGCATGGTGTCATTATCCTTGCTGA GGGCCGTCTCCTCAACTTGGGATGCGCAACTGGCCATCCCTCCTTTGTCA TGTCTGCCTCCTTTACGAACCAGACCCTTGCTCAGCTCGAGCTTTGGAAG GAGCGCAGCTCGGGGAAGTACGCCCGCGGGAAGGTGTATGTGCTGCCCAA GGTGTTGGACGAGAAGGTGGCGCGCTTGCACCTGAGCGCCCTGGGGGTGG AGCTGACGGAGCTCTCCTCGGAGCAGGCGGAGTATATTGGGGTGAATGTC GCGGGGCCTTTCAAGCCCGAGGCGTACCGTTACTAAACTGCTCTTGCGCA TTGCAGGGACTCGGGGAGGGAGGAGAGAGTGGTTCACGCAGCCTCTCAGA AGCCCTGGGGGAGGCTAACTTGTGCCCTCGTTCTTGTTGGCGCTAATGTT GCTGGTGCTGGAAATTTTGGGTTGTGCGTATGAAGGTCCTGGAATGCTCC AGGTTTTGCGTAGGGGGGAAAGAATTAGATGAAGGGTTTTTTGCTCTGTT TTAATGTTAGGTAGGTGGGTGGGTCGGTGAAGAGAAGAGAGAAAGAAGAG GAGAGGGCGTCCATCATCACCAGCACCGGCAAAAGAAAAGAACAATCTCT AAAGCGTTTTCTCGCAGTAGATATATTATGACCTTTATTGTGATCCCGTC ACTTTTCGTTGCAGGAAAGGTTGGTAACTTCAGGAGAATGAATATAATTG CTGCCTCTAGTAGAATTACCGTGCTCCATGCGCACAAGTCCTTGCTTCCG GGACGACTTTATCCCACCGTACACCCTGCCCGTCGTAGGGCTAGATATGT TATTGGGGGCGAAAGATGTGCGGTGCGGGCACACGTACGTGCCTTGCCTT TTTCGGCTGCGTAGCTTGGGCGTTGGCGATGCTGTGGTTGCCGTGCAAAG CCTCCTGTAACGTCTCACTTAACTCACGCACCCTCACCACAATCTTTTCT CACACATCCATGGATGCATAGGATTAAGCCTCTTCAGGCCCTCCACTAAA AAAAAAGCGTCCGAGGGATTTAATTGATTGATTGACGGAGGAGCACACTC AAACCTCCCCACCCTGTTGCCCTGGCCGGCCACCTCTCTGCCCACCACGC TCACAGCCCACCCCTCACACCAATCTAAGCAATGCGCGTGAACCGGGCCA AGCAAGTACGAAAATGGTTGCGATTCTACCGCATCGTCTACGGCGTGGCG CCTCCCTATATGATACTCATAGACGGCAACTTCATTTACATGGCTCTCAA AGTCAAAATTGACATCAAAGACCGCCTCAAGAAAATGCTGCTTGGTGAGA GCTTCGTCTGTTGCATCCCTAAAGCAGTCTTAGACGAGCTAGCTGCCTTA GGCCCTGCCTTCCACCCTGCCCTTGAGTGGGCACGCACCTGTTGCGAGGT CCTCTGCAACCCCCCTCCCGTACAAAACGACGATGACGTGGACCATGACA ACGAGAAGCAACGAGACACAATGAGCGCTGGAGAGGCCATCCGCACCTTG ATTGGCGAAGAGAACAAAGACAAATACATGGTGGCCACCCAAGACCAAGA CCTAAGATCCCAGCTTCGTCACGTCCCCTCCGTCGGGCTGCTCTTCGTCT CCCGCGCCGTCTTATTAATGGAAGCCCCCTCTAACGCCTCAAAGGCTGTG TCGGCCAAGCAAGAGGGGGAGAAGTTCCGACTTTTAAGCGAGGAGGAACG CTTGCTCTTGGCTAACATCAGAATGAAGGACAAGGATGCCGCCTCTGGTG AAAGGACGGTTGGAAGTGGGGAGCAGCAGCAGCAGCAGCAGCAGGAGGCG GGGATGGGTAGGAAGACTCGCGCAAAAAAGAAACCGAAAGGACCCAATCC GCTGTCAGTAAAAAAGTCTGACAAGAGCGAGATGAAGAAGAAGACGACGT CTACAACTACGCCTATTAAGAGTGGGGGGGCAAAAAAGGAGATGAGCGGT GGTTGTGGTAATGGAGGACGCGGAAGAGAAGGAGGAGGAGTAGGAGGAGG AGAGTCAGGAGGAGGGAGTGGCAAGAAACGCAAGCGCAAAAAGAGGAATG GCGCTCCTGCCATCGGTGGAGGAGGGAAGGTTTGAAAACAATGAGACGGC ACAGGAGGAGAATGAAGAGAAGGCAGGCACTATAACACAGTTTATACACA GGACTCTGTAAAATCGAAACGGAAGCAGACAGCTGCTGGGTAACATTGGC ATCATACACATCAAGTGAAACAGCCATTGCATTCGAAAATAAGTTAAGAC GGTTCAAAAAAGCTTGGGGCTGCTGTTTTGTGCTTGACGAGAGGCAGACG ACAGGAGCAACATCGCAGACAGGAGGCAGGGACAGATTGAGGCCTTCAGG AATGCGCCGCTTCATCTCTGCTCTGTCTCCCCCTTCCCTCCCCCCCAACA GGGACTCCATGTATATCGTTGCCGTGTAAAGGCCCATTTAAGTGAAGGGC GGAAAGGAAGATGGCCGAGGAGGACGACAGCAAAGAGTACCAGTCCCAAG AGCCCTCCAGCGGCAGTATCAGCGGCAGTCATAGCAACAAGAATAATAGC AAGTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG back to topprotein sequence of jgi.p|Nanoce1779_2|598165 >mRNA_7301-protein ID=mRNA_7301-protein|Name=jgi.p|Nanoce1779_2|598165|organism=Nannochloropsis oceanica|type=polypeptide|length=480bp MSMGDYRVADISLADFGRKEIQLAEVEMPGLMACREEFGTEALKGARIAG SLHMTIQTAVLIETLKAMGGDIRWCSCNIFSTQDHAAAAIARDESAAVFA WKGESLEEYWECTMNAITWPSDDGKGDGPDLIVDDGGDMTLLVHEGYKAE ELYAKDGTLPDPESTDNAEFKIVLTIIARELPKSPQKWHKVAARMFGVSE ETTTGVHRLYLMEKNKTLLFPAINVNDSVTKSKFDNLYGCKHSLPDGLMR ATDVMLAGKRAVICGYGDVGKGCAQAMKAAGSIVYVTEVDPICALQAAME GFRVVRMSSVIGEADIIITTTGNKGIIMAEDMAKMKNNAIIGNIGHFDNE LDMDGVMKIAKRENIKPQVDRFVFPDGHGVIILAEGRLLNLGCATGHPSF VMSASFTNQTLAQLELWKERSSGKYARGKVYVLPKVLDEKVARLHLSALG VELTELSSEQAEYIGVNVAGPFKPEAYRY* back to topmRNA from alignment at scaffold_19:165771..169794+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7301 ID=mRNA_7301|Name=jgi.p|Nanoce1779_2|598165|organism=Nannochloropsis oceanica|type=mRNA|length=4024bp|location=Sequence derived from alignment at scaffold_19:165771..169794+ (Nannochloropsis oceanica) ACAGAGACATCAAGCCCTCCGTTCTCCTCCCACACCCTTCGCAATCATGT
CTATGGGAGACTATCGCGTGGCGGACATTTCGCTTGCTGACTTCGGCCGC
AAGGAGATCCAGCTTGCCGAGGTTGAAATGCCTGGTCTGATGGCTTGCCG
GGAGGAATTCGGTACGGAGGCCCTCAAGGGTGCCCGCATTGCCGGCTCTT
TGCATATGACCATCCAGACGGCCGTACTCATCGAGACGCTCAAGGCTATG
GGCGGGGACATCCGATGGTGCTCTTGCAACATCTTCTCTACCCAGGACCA
CGCCGCGGCCGCCATTGCCCGGGATGAGTCCGCTGCTGTCTTTGCCTGGA
AGGGCGAGAGCCTTGAGGAGTATTGGGAGTGCACCATGAACGCCATTACG
TGGCCTTCGGACGACGGTAAGGGCGACGGACCTGACCTGATCGTCGATGA
CGGCGGGGACATGACTTTGCTCGTCCACGAGGGGTACAAGGCCGAGGAGC
TGTACGCCAAGGACGGGACCTTGCCCGACCCTGAGTCCACGGACAATGCG
GAGTTTAAGATCGTCCTGACCATCATTGCGCGTGAGCTGCCCAAGTCCCC
CCAAAAGTGGCACAAGGTCGCTGCGCGCATGTTCGGTGTGTCGGAGGAGA
CGACCACGGGTGTGCACCGCCTCTACCTGATGGAGAAGAACAAGACCCTA
CTCTTCCCTGCCATCAACGTCAACGACTCGGTGACCAAGTCCAAATTTGA
CAACTTGTATGGGTGCAAACACTCTCTCCCCGATGGCCTCATGCGCGCCA
CGGACGTTATGCTTGCCGGGAAGCGCGCCGTAATCTGCGGGTATGGAGAT
GTGGGGAAGGGCTGCGCGCAGGCCATGAAGGCTGCGGGCTCCATCGTATA
TGTCACAGAGGTGGATCCTATCTGCGCGTTGCAGGCTGCCATGGAGGGCT
TCCGTGTCGTGCGCATGAGCTCGGTGATCGGCGAGGCGGATATCATTATC
ACCACGACGGGGAATAAGGGGATCATCATGGCGGAGGACATGGCCAAGAT
GAAGAACAACGCCATCATTGGTAACATTGGCCACTTCGACAACGAGCTTG
ACATGGACGGTGTGATGAAGATCGCCAAGCGCGAGAACATCAAGCCCCAA
GTCGACCGTTTCGTCTTCCCGGACGGGCATGGTGTCATTATCCTTGCTGA
GGGCCGTCTCCTCAACTTGGGATGCGCAACTGGCCATCCCTCCTTTGTCA
TGTCTGCCTCCTTTACGAACCAGACCCTTGCTCAGCTCGAGCTTTGGAAG
GAGCGCAGCTCGGGGAAGTACGCCCGCGGGAAGGTGTATGTGCTGCCCAA
GGTGTTGGACGAGAAGGTGGCGCGCTTGCACCTGAGCGCCCTGGGGGTGG
AGCTGACGGAGCTCTCCTCGGAGCAGGCGGAGTATATTGGGGTGAATGTC
GCGGGGCCTTTCAAGCCCGAGGCGTACCGTTACTAAACTGCTCTTGCGCA
TTGCAGGGACTCGGGGAGGGAGGAGAGAGTGGTTCACGCAGCCTCTCAGA
AGCCCTGGGGGAGGCTAACTTGTGCCCTCGTTCTTGTTGGCGCTAATGTT
GCTGGTGCTGGAAATTTTGGGTTGTGCGTATGAAGGTCCTGGAATGCTCC
AGGTTTTGCGTAGGGGGGAAAGAATTAGATGAAGGGTTTTTTGCTCTGTT
TTAATGTTAGGTAGGTGGGTGGGTCGGTGAAGAGAAGAGAGAAAGAAGAG
GAGAGGGCGTCCATCATCACCAGCACCGGCAAAAGAAAAGAACAATCTCT
AAAGCGTTTTCTCGCAGTAGATATATTATGACCTTTATTGTGATCCCGTC
ACTTTTCGTTGCAGGAAAGGTTGGTAACTTCAGGAGAATGAATATAATTG
CTGCCTCTAGTAGAATTACCGTGCTCCATGCGCACAAGTCCTTGCTTCCG
GGACGACTTTATCCCACCGTACACCCTGCCCGTCGTAGGGCTAGATATGT
TATTGGGGGCGAAAGATGTGCGGTGCGGGCACACGTACGTGCCTTGCCTT
TTTCGGCTGCGTAGCTTGGGCGTTGGCGATGCTGTGGTTGCCGTGCAAAG
CCTCCTGTAACGTCTCACTTAACTCACGCACCCTCACCACAATCTTTTCT
CACACATCCATGGATGCATAGGATTAAGCCTCTTCAGGCCCTCCACTAAA
AAAAAAGCGTCCGAGGGATTTAATTGATTGATTGACGGAGGAGCACACTC
AAACCTCCCCACCCTGTTGCCCTGGCCGGCCACCTCTCTGCCCACCACGC
TCACAGCCCACCCCTCACACCAATCTAAGCAATGCGCGTGAACCGGGCCA
AGCAAGTACGAAAATGGTTGCGATTCTACCGCATCGTCTACGGCGTGGCG
CCTCCCTATATGGTACGTTTTGTGTGTGCGTTGCTCCTTGCACAGAGGAG
AAACTCGTTTGATATGGAAGCGACTCCCGTTTTTTAAAAATACAGACCCA
ATGGCATATGCACTTGCGGCCCTGGGCTCTTCCGTGACATCACGTTACGG
TCATACCTACAGTACTGCTGCCTCTTTCTCTCCCACCAAGCTTTCACTCT
CACTCGACCCTCCCCGCCCTCCGTCACTCAACCCTCCCCGCCCTCCAGAT
ACTCATAGACGGCAACTTCATTTACATGGCTCTCAAAGTCAAAATTGACA
TCAAAGACCGCCTCAAGAAAATGCTGCTTGGTGAGAGCTTCGTCTGTTGC
ATCCCTAAAGCAGTCTTAGACGAGCTAGCTGCCTTAGGCCCTGCCTTCCA
CCCTGCCCTTGAGTGGGCACGCACCTGTTGCGAGGTCCTCTGCAACCCCC
CTCCCGTACAAAACGACGATGACGTGGACCATGACAACGAGAAGCAACGA
GACACAATGAGCGCTGGAGAGGCCATCCGCACCTTGATTGGCGAAGAGAA
CAAAGACAAATACATGGTGGCCACCCAAGACCAAGACCTAAGATCCCAGC
TTCGTCACGTCCCCTCCGTCGGGCTGCTCTTCGTCTCCCGCGCCGTCTTA
TTAATGGAAGCCCCCTCTAACGCCTCAAAGGCTGTGTCGGCCAAGCAAGA
GGGGGAGAAGTTCCGACTTTTAAGCGAGGAGGAACGCTTGCTCTTGGCTA
ACATCAGAATGAAGGACAAGGATGCCGCCTCTGGTGAAAGGACGGTTGGA
AGTGGGGAGCAGCAGCAGCAGCAGCAGCAGGAGGCGGGGATGGGTAGGAA
GACTCGCGCAAAAAAGAAACCGAAAGGACCCAATCCGCTGTCAGTAAAAA
AGTCTGACAAGAGCGAGATGAAGAAGAAGACGACGTCTACAACTACGCCT
ATTAAGAGTGGGGGGGCAAAAAAGGAGATGAGCGGTGGTTGTGGTAATGG
AGGACGCGGAAGAGAAGGAGGAGGAGTAGGAGGAGGAGAGTCAGGAGGAG
GGAGTGGCAAGAAACGCAAGCGCAAAAAGAGGAATGGCGCTCCTGCCATC
GGTGGAGGAGGGAAGGTTTGAAAACAATGAGACGGCACAGGAGGAGAATG
AAGAGAAGGCAGGCACTATAACACAGTTTATACACAGGACTCTGTAAAAT
CGAAACGGAAGCAGACAGCTGCTGGGTAACATTGGCATCATACACATCAA
GTGAAACAGCCATTGCATTCGAAAATAAGTTAAGACGGTTCAAAAAAGCT
TGGGGCTGCTGTTTTGTGCTTGACGAGAGGCAGACGACAGGAGCAACATC
GCAGACAGGAGGCAGGGACAGATTGAGGCCTTCAGGAATGCGCCGCTTCA
TCTCTGCTCTGTCTCCCCCTTCCCTCCCCCCCAACAGGGACTCCATGTAT
ATCGTTGCCGTGTAAAGGCCCATTTAAGTGAAGGGCGGAAAGGAAGATGG
CCGAGGAGGACGACAGCAAAGAGTACCAGTCCCAAGAGCCCTCCAGCGGC
AGTATCAGCGGCAGTCATAGCAACAAGAATAATAGCAAGTGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAG back to topCoding sequence (CDS) from alignment at scaffold_19:165771..169794+ >mRNA_7301 ID=mRNA_7301|Name=jgi.p|Nanoce1779_2|598165|organism=Nannochloropsis oceanica|type=CDS|length=1440bp|location=Sequence derived from alignment at scaffold_19:165771..169794+ (Nannochloropsis oceanica) ATGTCTATGGGAGACTATCGCGTGGCGGACATTTCGCTTGCTGACTTCGG CCGCAAGGAGATCCAGCTTGCCGAGGTTGAAATGCCTGGTCTGATGGCTT GCCGGGAGGAATTCGGTACGGAGGCCCTCAAGGGTGCCCGCATTGCCGGC TCTTTGCATATGACCATCCAGACGGCCGTACTCATCGAGACGCTCAAGGC TATGGGCGGGGACATCCGATGGTGCTCTTGCAACATCTTCTCTACCCAGG ACCACGCCGCGGCCGCCATTGCCCGGGATGAGTCCGCTGCTGTCTTTGCC TGGAAGGGCGAGAGCCTTGAGGAGTATTGGGAGTGCACCATGAACGCCAT TACGTGGCCTTCGGACGACGGTAAGGGCGACGGACCTGACCTGATCGTCG ATGACGGCGGGGACATGACTTTGCTCGTCCACGAGGGGTACAAGGCCGAG GAGCTGTACGCCAAGGACGGGACCTTGCCCGACCCTGAGTCCACGGACAA TGCGGAGTTTAAGATCGTCCTGACCATCATTGCGCGTGAGCTGCCCAAGT CCCCCCAAAAGTGGCACAAGGTCGCTGCGCGCATGTTCGGTGTGTCGGAG GAGACGACCACGGGTGTGCACCGCCTCTACCTGATGGAGAAGAACAAGAC CCTACTCTTCCCTGCCATCAACGTCAACGACTCGGTGACCAAGTCCAAAT TTGACAACTTGTATGGGTGCAAACACTCTCTCCCCGATGGCCTCATGCGC GCCACGGACGTTATGCTTGCCGGGAAGCGCGCCGTAATCTGCGGGTATGG AGATGTGGGGAAGGGCTGCGCGCAGGCCATGAAGGCTGCGGGCTCCATCG TATATGTCACAGAGGTGGATCCTATCTGCGCGTTGCAGGCTGCCATGGAG GGCTTCCGTGTCGTGCGCATGAGCTCGGTGATCGGCGAGGCGGATATCAT TATCACCACGACGGGGAATAAGGGGATCATCATGGCGGAGGACATGGCCA AGATGAAGAACAACGCCATCATTGGTAACATTGGCCACTTCGACAACGAG CTTGACATGGACGGTGTGATGAAGATCGCCAAGCGCGAGAACATCAAGCC CCAAGTCGACCGTTTCGTCTTCCCGGACGGGCATGGTGTCATTATCCTTG CTGAGGGCCGTCTCCTCAACTTGGGATGCGCAACTGGCCATCCCTCCTTT GTCATGTCTGCCTCCTTTACGAACCAGACCCTTGCTCAGCTCGAGCTTTG GAAGGAGCGCAGCTCGGGGAAGTACGCCCGCGGGAAGGTGTATGTGCTGC CCAAGGTGTTGGACGAGAAGGTGGCGCGCTTGCACCTGAGCGCCCTGGGG GTGGAGCTGACGGAGCTCTCCTCGGAGCAGGCGGAGTATATTGGGGTGAA TGTCGCGGGGCCTTTCAAGCCCGAGGCGTACCGTTACTAA back to top
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