|
Properties
Property Name | Value |
TranscriptId | 558509 |
Track | FilteredModels2 |
ProteinId | 558423 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_19 | supercontig | scaffold_19:156628..159450 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7296 ID=mRNA_7296|Name=jgi.p|Nanoce1779_2|558423|organism=Nannochloropsis oceanica|type=mRNA|length=2636bp GCTGCTGCTGCTGCTGCTGCTGCAGGTGTTGTTGCGTTTGCTGCGCCGCC GTCAGCAAGACAGCCAAGCTGTAGCTGGCCTGAGCATGGCCTTTTTCGGC GAGTTTATTCAATAGTACCTGCGCTTGTGATCGATTCTCTGCGGTCCCAC TCCCAAAGAGCAAGCAGTTGGCATAGTTATATGTCCCCTCCTCGTCCCCT CTCAATCCCGCAGCCCGCCAGAGCGCGGCTGCCTTTTCCTGGTCCTGGGG AATAAACATCCCCTGCGCCTGCAAGCCCGACCAAAACAAATCTCCTAGAA ACAACAATGCTTCGGGTGGCAAAGGTGGGTCTGCTTCTGCGAGAAGCTCT TCAGTACTCTGCTTGGCGGCCATCAAGACCTTCGCAGGCGCTAGAGGAGG GGCACCAGTGCCTCTGCTGCTCATGCTGCTCCTGCTCCTGCTGAACATAT CCTCGGCACCAGTCAATGACTGGGCAGCAGCTTGAGTCAGGTTACCGCCT AGACTGGTCAGGACCTCTTGATACTTGACCCGATGGTGCTCTTCTTTGGA GGGGGTGATGGTGGTGAAGCCGTGCGGGAGGAAAGCGGGATAGGTAGTCG CCCTATAGCAAGAGAGGAAGAGCGGGGTCAGGAATGGTCCGGGCAAGCAT AGTGGCGAGGAGAGCCTCTTTCCGCCGCACATGTTGCCGCCTGACGGGGT ACATAGAGGAGGTTTTTGCATATTCTCACCTTGGGAAGGACGACGATGTC GCTAGTTTGCCGCGCGAGAGGCTGCTGCTGCCACCGCTGCTGCTGCCGCT GCATGCGAGGGAGCCTACAAGACGACGCATTGTGCTCTGTGGGTATTGTG AGAAGGAGAAGTCGTTAAGCGAATGAATGAGAGGTCTGAGCTTGTGGGCT TGGACTTCGCGAGAGGCTGTCCTCTACCTGTCCTCCGTGATGTACCTCAG CCAGTACACCACCATTTTTCACTCAAACCATGCTTCTATTCCATACATAG GCTACTGGAAGTGCGGCTATCATTGCCGCACTTTGTGCTGAGTGTGTTCA GGGGATCCATCACACTGGCAGTCAGGCGTCACCCGGGCAACGCACCCTGT GCCCCTTACTATGCCTTCCGCAGGAGCTGCTACACGGACTCCGGTGGCCA CCGCCTTGGCCTCCATGAGCCTGGCCTTGGAGAAACGGGCACGCATTGGC AAGCTCCGAGAGCTGCCTGAGACGACAAGACTTGTTGGTGCGGCCGACTT TACCAGCAACGATTATCTGGGTCTGGCACGCTGCCCCGAGCTAGCCAAGC GTATTCAGGCGGAGGCGGCGCGTGTAGAGGCTGTGAGCAGGGCAAAGGGT GGGCCCTTCATAGGCGCGACGGGCTCGCGGCTCTTGTCAGGTACAACCTG GTACCATATCGAGGTGGAGTCGTGGTTGGCCAACTTCTTTCGACGAGAAA GTGCACTGGTCTTCAACTCGGGCTATGATTTGAATCTGGGGTTATTGGCT TGTCTGACTCGACCAGGGGATGCCGTGCTCTTCGATGAGCTCATCCACAA TTCCAGCCATCAACCGATCCGCCCGTGGGTATTTCGTCATAACGACGTCC AGGACCTAGAAGCACGCTTGAAAGAAGCTCGTGCGACCCTCGGTCCAGCT GCCTCCCTCTTCGTGGCAGTTGAAGCTATATATTCCATGGACGGGGATTT AGCTCCACTAACTCGTATTTGTGACACAGCTGCACGTCATGGTGCCTGTG TCATTGTCGACGAGGCGCACAGTACAGGGGTGGTAGGGGAGGGAGGGAGG GGTTTGGTGTGTAGGGAGGGATTGGAGGGGCACCCGGCATTGCTCTGCTC GATCCACACATTTGGAAAGGCCTTGGGGTGCCATGGCGCTGTGTTGTGCG GTCCGAAGGTGTTGAGAGACTACTGCGGAAACTACTGCGCGCCCTTCATC TACTCCACCGCGGCTTCTTTCCACTCCTTGGCCAGCATGCGTCAGGCGGC TGAGTTCCAACAAGGGGAGGAAGGAGAACGGCGTCGGTCGATTCTAACCC ATCTCGTCTCAATCTTCAAGAATGTCGTCGGCGAGGCCCTCGCAGAAAGA GAAGAACAAGAAAGCTGCCGTCTTCTTCCCAGTCCCACGCCGATTCAAGC GGTGCTTGTGCCAGGGAATACACGGGTGAGTGCAATGGCAACGGCACTGC AGACAGCAGGATTGGACGTGAGGCCGCTTCGCCCACCGACTGTTCCGGAG GGAAGAGAACGGTTGAGAGTGGTGTTGCACTCGCATAATACAGAGGGGGA GATCCAGGCCTTGACTCGGGGATTGGTGGACTTTCTGGAGGAGGAGAGAG AGCAGAGGGGGCGTGGCAGCAGTTGTAGCAGTAAAAGTGCGGCTGCTGAT ACCTCTGCCGCTGCTCATGCTGTGATGGCTCCAGCCTCGATCCTAGAGAG AGGTGATGGTATTGCTGCGTCTGTCGAGGATATCAGCAGCAGCAGCAGCA GCAGTAGCAGCAGCAGCGGCAGTTTTGTGTCGACGAAAAGTCGATTGTAA TGATAACGACAAGAGAAAATGTGATTCAAATATACGAAAATAAGCCAAAC ATTACAACGAAGGACAAAATATAAATTGGAGAGAAC back to topprotein sequence of jgi.p|Nanoce1779_2|558423 >mRNA_7296-protein ID=mRNA_7296-protein|Name=jgi.p|Nanoce1779_2|558423|organism=Nannochloropsis oceanica|type=polypeptide|length=480bp MPSAGAATRTPVATALASMSLALEKRARIGKLRELPETTRLVGAADFTSN DYLGLARCPELAKRIQAEAARVEAVSRAKGGPFIGATGSRLLSGTTWYHI EVESWLANFFRRESALVFNSGYDLNLGLLACLTRPGDAVLFDELIHNSSH QPIRPWVFRHNDVQDLEARLKEARATLGPAASLFVAVEAIYSMDGDLAPL TRICDTAARHGACVIVDEAHSTGVVGEGGRGLVCREGLEGHPALLCSIHT FGKALGCHGAVLCGPKVLRDYCGNYCAPFIYSTAASFHSLASMRQAAEFQ QGEEGERRRSILTHLVSIFKNVVGEALAEREEQESCRLLPSPTPIQAVLV PGNTRVSAMATALQTAGLDVRPLRPPTVPEGRERLRVVLHSHNTEGEIQA LTRGLVDFLEEEREQRGRGSSCSSKSAAADTSAAAHAVMAPASILERGDG IAASVEDISSSSSSSSSSSGSFVSTKSRL* back to topmRNA from alignment at scaffold_19:156628..159450- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7296 ID=mRNA_7296|Name=jgi.p|Nanoce1779_2|558423|organism=Nannochloropsis oceanica|type=mRNA|length=2823bp|location=Sequence derived from alignment at scaffold_19:156628..159450- (Nannochloropsis oceanica) GCTGCTGCTGCTGCTGCTGCTGCAGGTGTTGTTGCGTTTGCTGCGCCGCC
GTCAGCAAGACAGCCAAGCTGTAGCTGGCCTGAGCATGGCCTTTTTCGGC
GAGTTTATTCAATAGTACCTGCGCTTGTGATCGATTCTCTGCGGTCCCAC
TCCCAAAGAGCAAGCAGTTGGCATAGTTATATGTCCCCTCCTCGTCCCCT
CTCAATCCCGCAGCCCGCCAGAGCGCGGCTGCCTTTTCCTGGTCCTGGGG
AATAAACATCCCCTGCGCCTGCAAGCCCGACCAAAACAAATCTCCTAGAA
ACAACAATGCTTCGGGTGGCAAAGGTGGGTCTGCTTCTGCGAGAAGCTCT
TCAGTACTCTGCTTGGCGGCCATCAAGACCTTCGCAGGCGCTAGAGGAGG
GGCACCAGTGCCTCTGCTGCTCATGCTGCTCCTGCTCCTGCTGAACATAT
CCTCGGCACCAGTCAATGACTGGGCAGCAGCTTGAGTCAGGTTACCGCCT
AGACTGGTCAGGACCTCTTGATACTTGACCCGATGGTGCTCTTCTTTGGA
GGGGGTGATGGTGGTGAAGCCGTGCGGGAGGAAAGCGGGATAGGTAGTCG
CCCTATAGCAAGAGAGGAAGAGCGGGGTCAGGAATGGTCCGGGCAAGCAT
AGTGGCGAGGAGAGCCTCTTTCCGCCGCACATGTTGCCGCCTGACGGGGT
ACATAGAGGAGGTTTTTGCATATTCTCACCTTGGGAAGGACGACGATGTC
GCTAGTTTGCCGCGCGAGAGGCTGCTGCTGCCACCGCTGCTGCTGCCGCT
GCATGCGAGGGAGCCTACAAGACGACGCATTGTGCTCTGTGGGTATTGTG
AGAAGGAGAAGTCGTTAAGCGAATGAATGAGAGGTCTGAGCTTGTGGGCT
TGGACTTCGCGAGAGGCTGTCCTCTACCTGTCCTCCGTGATGTACCTCAG
CCAGTACACCACCATTTTTCACTCAAACCATGCTTCTATTCCATACATAG
GCTACTGGAAGTGCGGCTATCATTGCCGCACTTTGTGCTGAGTGTGTTCA
GGGGATCCATCACACTGGCAGTCAGGCGTCACCCGGGCAACGCACCCTGT
GCCCCTTACTATGCCTTCCGCAGGAGCTGCTACACGGACTCCGGTGGCCA
CCGCCTTGGCCTCCATGAGCCTGGCCTTGGAGAAACGGGCACGCATTGGC
AAGCTCCGAGAGCTGCCTGAGACGGTACGTTTTTCCTCCACCAACTGTCA
GCCTTGTCTCCGCTTATCCCGCAAGCGCCATTTCACGCTCCTTCTACTTC
TGCTTATCCCCAAAGACAAGACTTGTTGGTGCGGCCGACTTTACCAGCAA
CGATTATCTGGGTCTGGCACGCTGCCCCGAGCTAGCCAAGCGTATTCAGG
CGGAGGCGGCGCGTGTAGAGGCTGTGAGCAGGGCAAAGGGTGGGCCCTTC
ATAGGCGCGACGGGCTCGCGGCTCTTGTCAGGTACAACCTGGTACCATAT
CGAGGTGGAGTCGTGGTTGGCCAACTTCTTTCGACGAGAAAGTGCACTGG
TCTTCAACTCGGGCTATGATTTGAATCTGGGGTTATTGGCTTGTCTGACT
CGACCAGGGGATGCCGTGCTCTTCGATGAGCTCATCCACAATTCCAGCGT
GATGGGGCTGCGGCTTGGCGCGTGGCACCACCACAAACAACAACAACAAC
AACGACGACAAGAACAGCTATTCCAAAAAGGAGAGGAGCAGCAGCATCAA
CCGATCCGCCCGTGGGTATTTCGTCATAACGACGTCCAGGACCTAGAAGC
ACGCTTGAAAGAAGCTCGTGCGACCCTCGGTCCAGCTGCCTCCCTCTTCG
TGGCAGTTGAAGCTATATATTCCATGGACGGGGATTTAGCTCCACTAACT
CGTATTTGTGACACAGCTGCACGTCATGGTGCCTGTGTCATTGTCGACGA
GGCGCACAGTACAGGGGTGGTAGGGGAGGGAGGGAGGGGTTTGGTGTGTA
GGGAGGGATTGGAGGGGCACCCGGCATTGCTCTGCTCGATCCACACATTT
GGAAAGGCCTTGGGGTGCCATGGCGCTGTGTTGTGCGGTCCGAAGGTGTT
GAGAGACTACTGCGGAAACTACTGCGCGCCCTTCATCTACTCCACCGCGG
CTTCTTTCCACTCCTTGGCCAGCATGCGTCAGGCGGCTGAGTTCCAACAA
GGGGAGGAAGGAGAACGGCGTCGGTCGATTCTAACCCATCTCGTCTCAAT
CTTCAAGAATGTCGTCGGCGAGGCCCTCGCAGAAAGAGAAGAACAAGAAA
GCTGCCGTCTTCTTCCCAGTCCCACGCCGATTCAAGCGGTGCTTGTGCCA
GGGAATACACGGGTGAGTGCAATGGCAACGGCACTGCAGACAGCAGGATT
GGACGTGAGGCCGCTTCGCCCACCGACTGTTCCGGAGGGAAGAGAACGGT
TGAGAGTGGTGTTGCACTCGCATAATACAGAGGGGGAGATCCAGGCCTTG
ACTCGGGGATTGGTGGACTTTCTGGAGGAGGAGAGAGAGCAGAGGGGGCG
TGGCAGCAGTTGTAGCAGTAAAAGTGCGGCTGCTGATACCTCTGCCGCTG
CTCATGCTGTGATGGCTCCAGCCTCGATCCTAGAGAGAGGTGATGGTATT
GCTGCGTCTGTCGAGGATATCAGCAGCAGCAGCAGCAGCAGTAGCAGCAG
CAGCGGCAGTTTTGTGTCGACGAAAAGTCGATTGTAATGATAACGACAAG
AGAAAATGTGATTCAAATATACGAAAATAAGCCAAACATTACAACGAAGG
ACAAAATATAAATTGGAGAGAAC back to topCoding sequence (CDS) from alignment at scaffold_19:156628..159450- >mRNA_7296 ID=mRNA_7296|Name=jgi.p|Nanoce1779_2|558423|organism=Nannochloropsis oceanica|type=CDS|length=4320bp|location=Sequence derived from alignment at scaffold_19:156628..159450- (Nannochloropsis oceanica) CATCAACCGATCCGCCCGTGGGTATTTCGTCATAACGACGTCCAGGACCT AGAAGCACGCTTGAAAGAAGCTCGTGCGACCCTCGGTCCAGCTGCCTCCC TCTTCGTGGCAGTTGAAGCTATATATTCCATGGACGGGGATTTAGCTCCA CTAACTCGTATTTGTGACACAGCTGCACGTCATGGTGCCTGTGTCATTGT CGACGAGGCGCACAGTACAGGGGTGGTAGGGGAGGGAGGGAGGGGTTTGG TGTGTAGGGAGGGATTGGAGGGGCACCCGGCATTGCTCTGCTCGATCCAC ACATTTGGAAAGGCCTTGGGGTGCCATGGCGCTGTGTTGTGCGGTCCGAA GGTGTTGAGAGACTACTGCGGAAACTACTGCGCGCCCTTCATCTACTCCA CCGCGGCTTCTTTCCACTCCTTGGCCAGCATGCGTCAGGCGGCTGAGTTC CAACAAGGGGAGGAAGGAGAACGGCGTCGGTCGATTCTAACCCATCTCGT CTCAATCTTCAAGAATGTCGTCGGCGAGGCCCTCGCAGAAAGAGAAGAAC AAGAAAGCTGCCGTCTTCTTCCCAGTCCCACGCCGATTCAAGCGGTGCTT GTGCCAGGGAATACACGGGTGAGTGCAATGGCAACGGCACTGCAGACAGC AGGATTGGACGTGAGGCCGCTTCGCCCACCGACTGTTCCGGAGGGAAGAG AACGGTTGAGAGTGGTGTTGCACTCGCATAATACAGAGGGGGAGATCCAG GCCTTGACTCGGGGATTGGTGGACTTTCTGGAGGAGGAGAGAGAGCAGAG GGGGCGTGGCAGCAGTTGTAGCAGTAAAAGTGCGGCTGCTGATACCTCTG CCGCTGCTCATGCTGTGATGGCTCCAGCCTCGATCCTAGAGAGAGGTGAT GGTATTGCTGCGTCTGTCGAGGATATCAGCAGCAGCAGCAGCAGCAGTAG CAGCAGCAGCGGCAGTTTTGTGTCGACGAAAAGTCGATTGTAAACAAGAC TTGTTGGTGCGGCCGACTTTACCAGCAACGATTATCTGGGTCTGGCACGC TGCCCCGAGCTAGCCAAGCGTATTCAGGCGGAGGCGGCGCGTGTAGAGGC TGTGAGCAGGGCAAAGGGTGGGCCCTTCATAGGCGCGACGGGCTCGCGGC TCTTGTCAGGTACAACCTGGTACCATATCGAGGTGGAGTCGTGGTTGGCC AACTTCTTTCGACGAGAAAGTGCACTGGTCTTCAACTCGGGCTATGATTT GAATCTGGGGTTATTGGCTTGTCTGACTCGACCAGGGGATGCCGTGCTCT TCGATGAGCTCATCCACAATTCCAGCATGCCTTCCGCAGGAGCTGCTACA CGGACTCCGGTGGCCACCGCCTTGGCCTCCATGAGCCTGGCCTTGGAGAA ACGGGCACGCATTGGCAAGCTCCGAGAGCTGCCTGAGACGCATCAACCGA TCCGCCCGTGGGTATTTCGTCATAACGACGTCCAGGACCTAGAAGCACGC TTGAAAGAAGCTCGTGCGACCCTCGGTCCAGCTGCCTCCCTCTTCGTGGC AGTTGAAGCTATATATTCCATGGACGGGGATTTAGCTCCACTAACTCGTA TTTGTGACACAGCTGCACGTCATGGTGCCTGTGTCATTGTCGACGAGGCG CACAGTACAGGGGTGGTAGGGGAGGGAGGGAGGGGTTTGGTGTGTAGGGA GGGATTGGAGGGGCACCCGGCATTGCTCTGCTCGATCCACACATTTGGAA AGGCCTTGGGGTGCCATGGCGCTGTGTTGTGCGGTCCGAAGGTGTTGAGA GACTACTGCGGAAACTACTGCGCGCCCTTCATCTACTCCACCGCGGCTTC TTTCCACTCCTTGGCCAGCATGCGTCAGGCGGCTGAGTTCCAACAAGGGG AGGAAGGAGAACGGCGTCGGTCGATTCTAACCCATCTCGTCTCAATCTTC AAGAATGTCGTCGGCGAGGCCCTCGCAGAAAGAGAAGAACAAGAAAGCTG CCGTCTTCTTCCCAGTCCCACGCCGATTCAAGCGGTGCTTGTGCCAGGGA ATACACGGGTGAGTGCAATGGCAACGGCACTGCAGACAGCAGGATTGGAC GTGAGGCCGCTTCGCCCACCGACTGTTCCGGAGGGAAGAGAACGGTTGAG AGTGGTGTTGCACTCGCATAATACAGAGGGGGAGATCCAGGCCTTGACTC GGGGATTGGTGGACTTTCTGGAGGAGGAGAGAGAGCAGAGGGGGCGTGGC AGCAGTTGTAGCAGTAAAAGTGCGGCTGCTGATACCTCTGCCGCTGCTCA TGCTGTGATGGCTCCAGCCTCGATCCTAGAGAGAGGTGATGGTATTGCTG CGTCTGTCGAGGATATCAGCAGCAGCAGCAGCAGCAGTAGCAGCAGCAGC GGCAGTTTTGTGTCGACGAAAAGTCGATTGTAAACAAGACTTGTTGGTGC GGCCGACTTTACCAGCAACGATTATCTGGGTCTGGCACGCTGCCCCGAGC TAGCCAAGCGTATTCAGGCGGAGGCGGCGCGTGTAGAGGCTGTGAGCAGG GCAAAGGGTGGGCCCTTCATAGGCGCGACGGGCTCGCGGCTCTTGTCAGG TACAACCTGGTACCATATCGAGGTGGAGTCGTGGTTGGCCAACTTCTTTC GACGAGAAAGTGCACTGGTCTTCAACTCGGGCTATGATTTGAATCTGGGG TTATTGGCTTGTCTGACTCGACCAGGGGATGCCGTGCTCTTCGATGAGCT CATCCACAATTCCAGCATGCCTTCCGCAGGAGCTGCTACACGGACTCCGG TGGCCACCGCCTTGGCCTCCATGAGCCTGGCCTTGGAGAAACGGGCACGC ATTGGCAAGCTCCGAGAGCTGCCTGAGACGCATCAACCGATCCGCCCGTG GGTATTTCGTCATAACGACGTCCAGGACCTAGAAGCACGCTTGAAAGAAG CTCGTGCGACCCTCGGTCCAGCTGCCTCCCTCTTCGTGGCAGTTGAAGCT ATATATTCCATGGACGGGGATTTAGCTCCACTAACTCGTATTTGTGACAC AGCTGCACGTCATGGTGCCTGTGTCATTGTCGACGAGGCGCACAGTACAG GGGTGGTAGGGGAGGGAGGGAGGGGTTTGGTGTGTAGGGAGGGATTGGAG GGGCACCCGGCATTGCTCTGCTCGATCCACACATTTGGAAAGGCCTTGGG GTGCCATGGCGCTGTGTTGTGCGGTCCGAAGGTGTTGAGAGACTACTGCG GAAACTACTGCGCGCCCTTCATCTACTCCACCGCGGCTTCTTTCCACTCC TTGGCCAGCATGCGTCAGGCGGCTGAGTTCCAACAAGGGGAGGAAGGAGA ACGGCGTCGGTCGATTCTAACCCATCTCGTCTCAATCTTCAAGAATGTCG TCGGCGAGGCCCTCGCAGAAAGAGAAGAACAAGAAAGCTGCCGTCTTCTT CCCAGTCCCACGCCGATTCAAGCGGTGCTTGTGCCAGGGAATACACGGGT GAGTGCAATGGCAACGGCACTGCAGACAGCAGGATTGGACGTGAGGCCGC TTCGCCCACCGACTGTTCCGGAGGGAAGAGAACGGTTGAGAGTGGTGTTG CACTCGCATAATACAGAGGGGGAGATCCAGGCCTTGACTCGGGGATTGGT GGACTTTCTGGAGGAGGAGAGAGAGCAGAGGGGGCGTGGCAGCAGTTGTA GCAGTAAAAGTGCGGCTGCTGATACCTCTGCCGCTGCTCATGCTGTGATG GCTCCAGCCTCGATCCTAGAGAGAGGTGATGGTATTGCTGCGTCTGTCGA GGATATCAGCAGCAGCAGCAGCAGCAGTAGCAGCAGCAGCGGCAGTTTTG TGTCGACGAAAAGTCGATTGTAAACAAGACTTGTTGGTGCGGCCGACTTT ACCAGCAACGATTATCTGGGTCTGGCACGCTGCCCCGAGCTAGCCAAGCG TATTCAGGCGGAGGCGGCGCGTGTAGAGGCTGTGAGCAGGGCAAAGGGTG GGCCCTTCATAGGCGCGACGGGCTCGCGGCTCTTGTCAGGTACAACCTGG TACCATATCGAGGTGGAGTCGTGGTTGGCCAACTTCTTTCGACGAGAAAG TGCACTGGTCTTCAACTCGGGCTATGATTTGAATCTGGGGTTATTGGCTT GTCTGACTCGACCAGGGGATGCCGTGCTCTTCGATGAGCTCATCCACAAT TCCAGCATGCCTTCCGCAGGAGCTGCTACACGGACTCCGGTGGCCACCGC CTTGGCCTCCATGAGCCTGGCCTTGGAGAAACGGGCACGCATTGGCAAGC TCCGAGAGCTGCCTGAGACG back to top
|