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Properties
| Property Name | Value |
|---|
| TranscriptId | 598185 |
| Track | FilteredModels2 |
| ProteinId | 598099 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_19 | supercontig | scaffold_19:117780..118913 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7280 ID=mRNA_7280|Name=jgi.p|Nanoce1779_2|598099|organism=Nannochloropsis oceanica|type=mRNA|length=999bp
AGATTGCGAGGGGGCGGGGGAGATGTTCACCGTCACGACGCTTTTGCCGG
ACAAAGGGTCTCCGAAGCTCCCGACCTTGCCAGACGGCTCTATTGATTTT
TCGAAAGATTTCTTTGGGAAACGGACGAGCTTAACGGTCTCGGGGCAGTT
GAATGTGGAAACATATGCATGCGGTTTATCGGATGTGTATACGTTTGGGC
CGACGTTCCGAGCGGAGAATTCGCATACGACGAGGCACTTAGCAGAGTTC
TGGATGATCGAGCCTGAGATAGCCTTTGCCGATTTGGACATGGACATGGC
CTTGGCGGAGGATTACTTAAAGTATTGTGTGTGGTACGCACTCACGCACA
ACGAGGACGACTTGGTCTTGCTGGAGAAAGTCCCGGGGGGGGAGATGGGC
TTGAGGGACCGACTGAGGAATGTGCTCGAGAATCCGTTCGTCCGCATCAC
ATATACAGAGGCAGTGGCGATTCTGGAGAAAGACTTGGCGTCGAAGAAGG
TCAAGTTCGAAGTGAAGCCCGAGTGGGGCTGCGACTTGGGGAGTGAGCAC
GAGCGGTACCTGACGGAACAAGTATACCGGCGACCGGTGATCGTCACCAA
CTACCCCAAGGATATCAAGGCCTTTTACATGCGCTTGGACGAGGGGGGAA
AGACGGTGTCAGCCATGGACATCCTGGTGCCCAAGATTGGCGAGATCATA
GGTGGGTCCCAGCGTGAAGAGCGCTTGGACGTGCTGAAGGCACGGTGCCT
CGAGATGGGGCTGGAGGAGGAGGCGTTGTGGTGGTACTTGGAGTTGAGGA
AGTATGGCTCGCATAAACACGCGGGTTTTGGGTTGGGCTTTGAGCGTTTG
ATTTTATTTGTAACGGGTCTAGAGAATATCCGAGATGTGATTCCGTTCCC
GCGTTTCCCGGCGCACGCCGAGTTTTGAAAAGGAGGGAGCGTTAGAGCCA
AAGGTAGAAGAGGGAGTAAAGTGACGGGAGGAAAAAATGATGGGAGTGA back to topprotein sequence of jgi.p|Nanoce1779_2|598099 >mRNA_7280-protein ID=mRNA_7280-protein|Name=jgi.p|Nanoce1779_2|598099|organism=Nannochloropsis oceanica|type=polypeptide|length=302bp
MFTVTTLLPDKGSPKLPTLPDGSIDFSKDFFGKRTSLTVSGQLNVETYAC
GLSDVYTFGPTFRAENSHTTRHLAEFWMIEPEIAFADLDMDMALAEDYLK
YCVWYALTHNEDDLVLLEKVPGGEMGLRDRLRNVLENPFVRITYTEAVAI
LEKDLASKKVKFEVKPEWGCDLGSEHERYLTEQVYRRPVIVTNYPKDIKA
FYMRLDEGGKTVSAMDILVPKIGEIIGGSQREERLDVLKARCLEMGLEEE
ALWWYLELRKYGSHKHAGFGLGFERLILFVTGLENIRDVIPFPRFPAHAE
F* back to topmRNA from alignment at scaffold_19:117780..118913+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7280 ID=mRNA_7280|Name=jgi.p|Nanoce1779_2|598099|organism=Nannochloropsis oceanica|type=mRNA|length=1134bp|location=Sequence derived from alignment at scaffold_19:117780..118913+ (Nannochloropsis oceanica)
AGATTGCGAGGGGGCGGGGGAGATGTTCACCGTCACGACGCTTTTGCCGG
ACAAAGGGTCTCCGAAGCTCCCGACCTTGCCAGACGGCTCTATTGATTTT
TCGAAAGATTTCTTTGGGAAACGGACGAGCTTAACGGTCTCGGGGCAGTT
GAATGTGGAAACATATGCATGCGGTTTATCGGATGTGTATACGTTTGGGC
CGACGTTCCGAGCGGAGAATTCGCATACGACGAGGCACTTAGCAGAGTTC
TGGATGATCGAGCCTGAGATAGCCTTTGCCGATTTGGACATGGACATGGC
CTTGGCGGAGGATTACTTAAAGTATTGTGTGTGGTACGCACTCACGCACA
ACGAGGACGACTTGGTCTTGCTGGAGAAAGTCCCGGGGGGGGAGATGGGC
TTGAGGGACCGACTGAGGAATGTGCTCGAGAATCCGTTCGTCCGCATCAC
ATATACAGAGGCAGTGGCGATTCTGGAGAAAGACTTGGCGTCGAAGAAGG
TGAGCGGACGGAATGGGAGTGGGCATTAAGAGATGTTGCTGGTGCCCTAC
CCCCAAACCCAAAAAATATATACCGACACTCCTAACTCACCTTAATCCAA
TTGCTATCAATATCACACACCCACTCTTGCCCAGGTCAAGTTCGAAGTGA
AGCCCGAGTGGGGCTGCGACTTGGGGAGTGAGCACGAGCGGTACCTGACG
GAACAAGTATACCGGCGACCGGTGATCGTCACCAACTACCCCAAGGATAT
CAAGGCCTTTTACATGCGCTTGGACGAGGGGGGAAAGACGGTGTCAGCCA
TGGACATCCTGGTGCCCAAGATTGGCGAGATCATAGGTGGGTCCCAGCGT
GAAGAGCGCTTGGACGTGCTGAAGGCACGGTGCCTCGAGATGGGGCTGGA
GGAGGAGGCGTTGTGGTGGTACTTGGAGTTGAGGAAGTATGGCTCGCATA
AACACGCGGGTTTTGGGTTGGGCTTTGAGCGTTTGATTTTATTTGTAACG
GGTCTAGAGAATATCCGAGATGTGATTCCGTTCCCGCGTTTCCCGGCGCA
CGCCGAGTTTTGAAAAGGAGGGAGCGTTAGAGCCAAAGGTAGAAGAGGGA
GTAAAGTGACGGGAGGAAAAAATGATGGGAGTGA back to topCoding sequence (CDS) from alignment at scaffold_19:117780..118913+ >mRNA_7280 ID=mRNA_7280|Name=jgi.p|Nanoce1779_2|598099|organism=Nannochloropsis oceanica|type=CDS|length=1812bp|location=Sequence derived from alignment at scaffold_19:117780..118913+ (Nannochloropsis oceanica)
ATGTTCACCGTCACGACGCTTTTGCCGGACAAAGGGTCTCCGAAGCTCCC
GACCTTGCCAGACGGCTCTATTGATTTTTCGAAAGATTTCTTTGGGAAAC
GGACGAGCTTAACGGTCTCGGGGCAGTTGAATGTGGAAACATATGCATGC
GGTTTATCGGATGTGTATACGTTTGGGCCGACGTTCCGAGCGGAGAATTC
GCATACGACGAGGCACTTAGCAGAGTTCTGGATGATCGAGCCTGAGATAG
CCTTTGCCGATTTGGACATGGACATGGCCTTGGCGGAGGATTACTTAAAG
TATTGTGTGTGGTACGCACTCACGCACAACGAGGACGACTTGGTCTTGCT
GGAGAAAGTCCCGGGGGGGGAGATGGGCTTGAGGGACCGACTGAGGAATG
TGCTCGAGAATCCGTTCGTCCGCATCACATATACAGAGGCAGTGGCGATT
CTGGAGAAAGACTTGGCGTCGAAGAAGGTCAAGTTCGAAGTGAAGCCCGA
GTGGGGCTGCGACTTGGGGAGTGAGCACGAGCGGTACCTGACGGAACAAG
TATACCGGCGACCGGTGATCGTCACCAACTACCCCAAGGATATCAAGGCC
TTTTACATGCGCTTGGACGAGGGGGGAAAGACGGTGTCAGCCATGGACAT
CCTGGTGCCCAAGATTGGCGAGATCATAGGTGGGTCCCAGCGTGAAGAGC
GCTTGGACGTGCTGAAGGCACGGTGCCTCGAGATGGGGCTGGAGGAGGAG
GCGTTGTGGTGGTACTTGGAGTTGAGGAAGTATGGCTCGCATAAACACGC
GGGTTTTGGGTTGGGCTTTGAGCGTTTGATTTTATTTGTAACGGGTCTAG
AGAATATCCGAGATGTGATTCCGTTCCCGCGTTTCCCGGCGCACGCCGAG
TTTTGAATGTTCACCGTCACGACGCTTTTGCCGGACAAAGGGTCTCCGAA
GCTCCCGACCTTGCCAGACGGCTCTATTGATTTTTCGAAAGATTTCTTTG
GGAAACGGACGAGCTTAACGGTCTCGGGGCAGTTGAATGTGGAAACATAT
GCATGCGGTTTATCGGATGTGTATACGTTTGGGCCGACGTTCCGAGCGGA
GAATTCGCATACGACGAGGCACTTAGCAGAGTTCTGGATGATCGAGCCTG
AGATAGCCTTTGCCGATTTGGACATGGACATGGCCTTGGCGGAGGATTAC
TTAAAGTATTGTGTGTGGTACGCACTCACGCACAACGAGGACGACTTGGT
CTTGCTGGAGAAAGTCCCGGGGGGGGAGATGGGCTTGAGGGACCGACTGA
GGAATGTGCTCGAGAATCCGTTCGTCCGCATCACATATACAGAGGCAGTG
GCGATTCTGGAGAAAGACTTGGCGTCGAAGAAGGTCAAGTTCGAAGTGAA
GCCCGAGTGGGGCTGCGACTTGGGGAGTGAGCACGAGCGGTACCTGACGG
AACAAGTATACCGGCGACCGGTGATCGTCACCAACTACCCCAAGGATATC
AAGGCCTTTTACATGCGCTTGGACGAGGGGGGAAAGACGGTGTCAGCCAT
GGACATCCTGGTGCCCAAGATTGGCGAGATCATAGGTGGGTCCCAGCGTG
AAGAGCGCTTGGACGTGCTGAAGGCACGGTGCCTCGAGATGGGGCTGGAG
GAGGAGGCGTTGTGGTGGTACTTGGAGTTGAGGAAGTATGGCTCGCATAA
ACACGCGGGTTTTGGGTTGGGCTTTGAGCGTTTGATTTTATTTGTAACGG
GTCTAGAGAATATCCGAGATGTGATTCCGTTCCCGCGTTTCCCGGCGCAC
GCCGAGTTTTGA back to top
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