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Properties
| Property Name | Value |
|---|
| TranscriptId | 129058 |
| Track | FilteredModels2 |
| ProteinId | 128972 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_19 | supercontig | scaffold_19:90678..92898 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7266 ID=mRNA_7266|Name=jgi.p|Nanoce1779_2|128972|organism=Nannochloropsis oceanica|type=mRNA|length=1775bp
ATAGAGAAACAGCCAGAAAGAAACAAAGCCAGAAGTTGAATCATCACCAT
GAGACCGCATTATATGGAGGCGTTTTTGTGTCTTGGTTAGTGCGCATTGT
GTCTCGGTTTTGTGGGTTTTGTGTCAGGTAGGAGGTCCGTCATCTGTTCG
TTCCGCTCTGTGCACGTCATGTGCGCCTTATACAGAGCATATAGACAACG
AAATAATCCCTCTTCGTACACACACGATACAGGCGCGTTCATGAAAAAGT
AAAGAAAGTACATCCACCTATATCCATATCACAAGCCCGTCCATGAACGA
ATGTCCCTTGTGTCGTGCCAGCGCGGGGGACAGGTTGTCCTGTGCGGGGT
GCGTCAAGAACACACTCTACTACAAGCAGCAGGCCGTCGCGTACAAGAAG
TTGGCCCTGCTGGACGCATACGAACAAGCTAAGGTGGTTTTGACGGCACG
GCAGCCCATCTTTGAGGAGGAGCAGGCTGTGGCAGATTTGACGCGGCGGC
AAGGGGAGATGCGGAGACGCTTGCAAGAGACGGCCGAGAGCGTTCGAGAC
TTGCGCATTGCCCTGGCCCGTAAGACCTTTTCGGTGAATGAACGCCGGCG
GGCCTTGGCATCAGCCATGAGCAAATTAGACGAAGCTAAACGTCAACAAG
AAAGCCAGTCCTTCCCTGTGCTGAAGGGGCTGGAATGGTACAGAGAGCAA
GCGATGGAAGCGCTGCGGCAGCGGATGTGGACGAGGGTCTTGGAGCATTT
TGTGATCTTTCCGATCGAGGCCGACGTGCCTGGCCTTGTCCGTCCTCCCT
CCCTTCCTCCCTCTCTTTCGGCATCCAGTAGCAAGCAGAACCAGCCGCAA
CAGCTACAGTCAAGGGGTCGTCATTTTCATAATTCCAATCTGCTGCCGGG
CGTCAGTACTATTGCCGGCTTGCCAGTGCCCAACTCGGGATTGTACTCTG
AACTTGGTCTTCCCGACGAGGTCTGCGAAGCAGCTCTTTACCTAGTGGCG
CGCGTGACCTGGTCGTTAGCCAACACGTTAGGAGTGGAATTGCCTCATCC
ATTGCGATTTCCAGCAGGCAAGCCTTATGCCTTAGTGATGGAGGATGGAA
AGGGACGCACCGAGTTCGCCCTCAGTCCCTCTATCTACGCCAGCAGCAGC
ACCACCACCACCAATAGCACCAACAGTATCGGCAGAAGCAGACACACCCC
TCTCATCATAAAAAGGGATTGTGGGAGGGAGGAAGAGGGCACCGACCCCT
TTTCCCTCGCTCTGGAGGCATTGCAGTTTAACGTGCATCGTCTCGCTATC
TCCCCTACTGCGGTCGGTGTGGACGCGTCGGAGTTATTCGGGAAAGAAGC
CCTCTTATTGAACCTGTGGGCCATCCAACGGCAAGCTGCTCGGGTCGTCA
AAGCATATGAGGGATTTCCTGATGTGCCTTTGCCCCAACTAAAAGAAGGG
AGGAGGGGAGAGAGGAAAGAGGCCGAAGTAAGGGGGCAGCATCAGCAGCA
GTGTCATCAGCAGCAGCACGAGCAGGAAGGTGGATGTCAGCAACATCGGC
ACCAGCTGCACGGGGGGGCGCCGAGGGTGGTTTTTGAGGACAGGGAGGGA
TCGGAATGGAGCTTGGTGGAGCTGCAGAATCAGGTGGATGCTTTTGGAGG
AGGAGTTGGAGGAAGGGGAGGAGAAGGACGGTGAGAGGAAAGGAAAGAAG
AGAATGGATGAACACAAACAATGCACAGTGTGCAGGGAAGAGAAGTAAAT
AAAGTAATGGACAGCCTAAGGTCTC back to topprotein sequence of jgi.p|Nanoce1779_2|128972 >mRNA_7266-protein ID=mRNA_7266-protein|Name=jgi.p|Nanoce1779_2|128972|organism=Nannochloropsis oceanica|type=polypeptide|length=464bp
MNECPLCRASAGDRLSCAGCVKNTLYYKQQAVAYKKLALLDAYEQAKVVL
TARQPIFEEEQAVADLTRRQGEMRRRLQETAESVRDLRIALARKTFSVNE
RRRALASAMSKLDEAKRQQESQSFPVLKGLEWYREQAMEALRQRMWTRVL
EHFVIFPIEADVPGLVRPPSLPPSLSASSSKQNQPQQLQSRGRHFHNSNL
LPGVSTIAGLPVPNSGLYSELGLPDEVCEAALYLVARVTWSLANTLGVEL
PHPLRFPAGKPYALVMEDGKGRTEFALSPSIYASSSTTTTNSTNSIGRSR
HTPLIIKRDCGREEEGTDPFSLALEALQFNVHRLAISPTAVGVDASELFG
KEALLLNLWAIQRQAARVVKAYEGFPDVPLPQLKEGRRGERKEAEVRGQH
QQQCHQQQHEQEGGCQQHRHQLHGGAPRVVFEDREGSEWSLVELQNQVDA
FGGGVGGRGGEGR* back to topmRNA from alignment at scaffold_19:90678..92898+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7266 ID=mRNA_7266|Name=jgi.p|Nanoce1779_2|128972|organism=Nannochloropsis oceanica|type=mRNA|length=2221bp|location=Sequence derived from alignment at scaffold_19:90678..92898+ (Nannochloropsis oceanica)
ATAGAGAAACAGCCAGAAAGAAACAAAGCCAGAAGTTGAATCATCACCAT
GAGACCGCATTATATGGAGGCGTTTTTGTGTCTTGGTTAGTGCGCATTGT
GTCTCGGTTTTGTGGGTTTTGTGTCAGGTAGGAGGTCCGTCATCTGTTCG
TTCCGCTCTGTGCACGTCATGTGCGCCTTATACAGAGCATATAGACAACG
AAATAATCCCTCTTCGTACACACACGATACAGGCGCGTTCATGAAAAAGT
AAAGAAAGTACATCCACCTATATCCATATCACAAGCCCGTCCATGAACGA
ATGTCCCTTGTGTCGTGCCAGCGCGGGGGACAGGTTGTCCTGTGCGGGGT
GCGTCAAGAACACACTCTACTACAAGCAGCAGGCCGTCGCGTACAAGAAG
TTGGCCCTGCTGGACGCATACGAACAAGCTAAGGTGGTTTTGACGGCACG
GCAGCCCATCTTTGAGGAGGAGCAGGCTGTGGCAGATTTGACGCGGCGGC
AAGGGGAGATGCGGAGACGCTTGCAAGAGGTGGGCGTGAGGATCGAGGGA
GAGGGAAAGCAGATGCGTGAGACGGGACCTTGCCAGCCACAAGGCGAAAG
GCGCCACTGCTCACTCTTTCCAGAGCTCGAGTGTAATTTGTAACTCCCCC
TCTCCATTTTATCCCCTTTTTTCTGAAACAGACGGCCGAGAGCGTTCGAG
ACTTGCGCATTGCCCTGGCCCGTAAGACCTTTTCGGTGAATGAACGCCGG
CGGGCCTTGGCATCAGCCATGAGCAAATTAGACGAAGCTAAACGTCAACA
AGAAAGCCAGTCCTTCCCTGTGCTGAAGGGGCTGGAATGGTACAGAGAGC
AAGCGATGGAAGCGCTGCGGCAGCGGATGTGGACGAGGGTCTTGGAGCAT
TTTGTGATCTTTCCGATCGAGGCCGACGTGCCTGGCCTTGTCCGTCCTCC
CTCCCTTCCTCCCTCTCTTTCGGCATCCAGTAGCAAGCAGAACCAGCCGC
AACAGCTACAGTCAAGGGGTCGTCATTTTCATAATTCCAATCTGCTGCCG
GGCGTCAGTACTATTGCCGGCTTGCCAGTGCCCAACTCGGGATTGTACTC
TGGTAAGTGAGCGTGTGAAGAAGGGAGGTGGGGGGACCAGGAACGCGAGA
AGAGAAGAGAATCAATGGGATGTTGATGTAAACATGTGTGTCTCGCTGGC
GTTAGAGTGAATAGGAGGCAGGTAGTGTGCTTATTATCCTTTCTCTTCTA
TTCCCAAGAACTTGGTCTTCCCGACGAGGTCTGCGAAGCAGCTCTTTACC
TAGTGGCGCGCGTGACCTGGTCGTTAGCCAACACGTTAGGAGTGGAATTG
CCTCATCCATTGCGATTTCCAGCAGGCAAGCCTTATGCCTTAGTGATGGA
GGATGGAAAGGGACGGTGCGTGGAGGGAGGGAGGGAGGGAGTGACGGAGG
GACAGAGAAAGGGAGCCTCCCTCGTATTTTACGGCTTTCCAAGTCGTCAG
CTATTTTTAAATCCTCCTTCTCTGCCTCTCACACACTGTCGGCACAAAAA
CAGCACCGAGTTCGCCCTCAGTCCCTCTATCTACGCCAGCAGCAGCACCA
CCACCACCAATAGCACCAACAGTATCGGCAGAAGCAGACACACCCCTCTC
ATCATAAAAAGGGATTGTGGGAGGGAGGAAGAGGGCACCGACCCCTTTTC
CCTCGCTCTGGAGGCATTGCAGTTTAACGTGCATCGTCTCGCTATCTCCC
CTACTGCGGTCGGTGTGGACGCGTCGGAGTTATTCGGGAAAGAAGCCCTC
TTATTGAACCTGTGGGCCATCCAACGGCAAGCTGCTCGGGTCGTCAAAGC
ATATGAGGGATTTCCTGATGTGCCTTTGCCCCAACTAAAAGAAGGGAGGA
GGGGAGAGAGGAAAGAGGCCGAAGTAAGGGGGCAGCATCAGCAGCAGTGT
CATCAGCAGCAGCACGAGCAGGAAGGTGGATGTCAGCAACATCGGCACCA
GCTGCACGGGGGGGCGCCGAGGGTGGTTTTTGAGGACAGGGAGGGATCGG
AATGGAGCTTGGTGGAGCTGCAGAATCAGGTGGATGCTTTTGGAGGAGGA
GTTGGAGGAAGGGGAGGAGAAGGACGGTGAGAGGAAAGGAAAGAAGAGAA
TGGATGAACACAAACAATGCACAGTGTGCAGGGAAGAGAAGTAAATAAAG
TAATGGACAGCCTAAGGTCTC back to topCoding sequence (CDS) from alignment at scaffold_19:90678..92898+ >mRNA_7266 ID=mRNA_7266|Name=jgi.p|Nanoce1779_2|128972|organism=Nannochloropsis oceanica|type=CDS|length=5568bp|location=Sequence derived from alignment at scaffold_19:90678..92898+ (Nannochloropsis oceanica)
ATGAACGAATGTCCCTTGTGTCGTGCCAGCGCGGGGGACAGGTTGTCCTG
TGCGGGGTGCGTCAAGAACACACTCTACTACAAGCAGCAGGCCGTCGCGT
ACAAGAAGTTGGCCCTGCTGGACGCATACGAACAAGCTAAGGTGGTTTTG
ACGGCACGGCAGCCCATCTTTGAGGAGGAGCAGGCTGTGGCAGATTTGAC
GCGGCGGCAAGGGGAGATGCGGAGACGCTTGCAAGAGACGGCCGAGAGCG
TTCGAGACTTGCGCATTGCCCTGGCCCGTAAGACCTTTTCGGTGAATGAA
CGCCGGCGGGCCTTGGCATCAGCCATGAGCAAATTAGACGAAGCTAAACG
TCAACAAGAAAGCCAGTCCTTCCCTGTGCTGAAGGGGCTGGAATGGTACA
GAGAGCAAGCGATGGAAGCGCTGCGGCAGCGGATGTGGACGAGGGTCTTG
GAGCATTTTGTGATCTTTCCGATCGAGGCCGACGTGCCTGGCCTTGTCCG
TCCTCCCTCCCTTCCTCCCTCTCTTTCGGCATCCAGTAGCAAGCAGAACC
AGCCGCAACAGCTACAGTCAAGGGGTCGTCATTTTCATAATTCCAATCTG
CTGCCGGGCGTCAGTACTATTGCCGGCTTGCCAGTGCCCAACTCGGGATT
GTACTCTGAACTTGGTCTTCCCGACGAGGTCTGCGAAGCAGCTCTTTACC
TAGTGGCGCGCGTGACCTGGTCGTTAGCCAACACGTTAGGAGTGGAATTG
CCTCATCCATTGCGATTTCCAGCAGGCAAGCCTTATGCCTTAGTGATGGA
GGATGGAAAGGGACGCACCGAGTTCGCCCTCAGTCCCTCTATCTACGCCA
GCAGCAGCACCACCACCACCAATAGCACCAACAGTATCGGCAGAAGCAGA
CACACCCCTCTCATCATAAAAAGGGATTGTGGGAGGGAGGAAGAGGGCAC
CGACCCCTTTTCCCTCGCTCTGGAGGCATTGCAGTTTAACGTGCATCGTC
TCGCTATCTCCCCTACTGCGGTCGGTGTGGACGCGTCGGAGTTATTCGGG
AAAGAAGCCCTCTTATTGAACCTGTGGGCCATCCAACGGCAAGCTGCTCG
GGTCGTCAAAGCATATGAGGGATTTCCTGATGTGCCTTTGCCCCAACTAA
AAGAAGGGAGGAGGGGAGAGAGGAAAGAGGCCGAAGTAAGGGGGCAGCAT
CAGCAGCAGTGTCATCAGCAGCAGCACGAGCAGGAAGGTGGATGTCAGCA
ACATCGGCACCAGCTGCACGGGGGGGCGCCGAGGGTGGTTTTTGAGGACA
GGGAGGGATCGGAATGGAGCTTGGTGGAGCTGCAGAATCAGGTGGATGCT
TTTGGAGGAGGAGTTGGAGGAAGGGGAGGAGAAGGACGGTGAATGAACGA
ATGTCCCTTGTGTCGTGCCAGCGCGGGGGACAGGTTGTCCTGTGCGGGGT
GCGTCAAGAACACACTCTACTACAAGCAGCAGGCCGTCGCGTACAAGAAG
TTGGCCCTGCTGGACGCATACGAACAAGCTAAGGTGGTTTTGACGGCACG
GCAGCCCATCTTTGAGGAGGAGCAGGCTGTGGCAGATTTGACGCGGCGGC
AAGGGGAGATGCGGAGACGCTTGCAAGAGACGGCCGAGAGCGTTCGAGAC
TTGCGCATTGCCCTGGCCCGTAAGACCTTTTCGGTGAATGAACGCCGGCG
GGCCTTGGCATCAGCCATGAGCAAATTAGACGAAGCTAAACGTCAACAAG
AAAGCCAGTCCTTCCCTGTGCTGAAGGGGCTGGAATGGTACAGAGAGCAA
GCGATGGAAGCGCTGCGGCAGCGGATGTGGACGAGGGTCTTGGAGCATTT
TGTGATCTTTCCGATCGAGGCCGACGTGCCTGGCCTTGTCCGTCCTCCCT
CCCTTCCTCCCTCTCTTTCGGCATCCAGTAGCAAGCAGAACCAGCCGCAA
CAGCTACAGTCAAGGGGTCGTCATTTTCATAATTCCAATCTGCTGCCGGG
CGTCAGTACTATTGCCGGCTTGCCAGTGCCCAACTCGGGATTGTACTCTG
AACTTGGTCTTCCCGACGAGGTCTGCGAAGCAGCTCTTTACCTAGTGGCG
CGCGTGACCTGGTCGTTAGCCAACACGTTAGGAGTGGAATTGCCTCATCC
ATTGCGATTTCCAGCAGGCAAGCCTTATGCCTTAGTGATGGAGGATGGAA
AGGGACGCACCGAGTTCGCCCTCAGTCCCTCTATCTACGCCAGCAGCAGC
ACCACCACCACCAATAGCACCAACAGTATCGGCAGAAGCAGACACACCCC
TCTCATCATAAAAAGGGATTGTGGGAGGGAGGAAGAGGGCACCGACCCCT
TTTCCCTCGCTCTGGAGGCATTGCAGTTTAACGTGCATCGTCTCGCTATC
TCCCCTACTGCGGTCGGTGTGGACGCGTCGGAGTTATTCGGGAAAGAAGC
CCTCTTATTGAACCTGTGGGCCATCCAACGGCAAGCTGCTCGGGTCGTCA
AAGCATATGAGGGATTTCCTGATGTGCCTTTGCCCCAACTAAAAGAAGGG
AGGAGGGGAGAGAGGAAAGAGGCCGAAGTAAGGGGGCAGCATCAGCAGCA
GTGTCATCAGCAGCAGCACGAGCAGGAAGGTGGATGTCAGCAACATCGGC
ACCAGCTGCACGGGGGGGCGCCGAGGGTGGTTTTTGAGGACAGGGAGGGA
TCGGAATGGAGCTTGGTGGAGCTGCAGAATCAGGTGGATGCTTTTGGAGG
AGGAGTTGGAGGAAGGGGAGGAGAAGGACGGTGAATGAACGAATGTCCCT
TGTGTCGTGCCAGCGCGGGGGACAGGTTGTCCTGTGCGGGGTGCGTCAAG
AACACACTCTACTACAAGCAGCAGGCCGTCGCGTACAAGAAGTTGGCCCT
GCTGGACGCATACGAACAAGCTAAGGTGGTTTTGACGGCACGGCAGCCCA
TCTTTGAGGAGGAGCAGGCTGTGGCAGATTTGACGCGGCGGCAAGGGGAG
ATGCGGAGACGCTTGCAAGAGACGGCCGAGAGCGTTCGAGACTTGCGCAT
TGCCCTGGCCCGTAAGACCTTTTCGGTGAATGAACGCCGGCGGGCCTTGG
CATCAGCCATGAGCAAATTAGACGAAGCTAAACGTCAACAAGAAAGCCAG
TCCTTCCCTGTGCTGAAGGGGCTGGAATGGTACAGAGAGCAAGCGATGGA
AGCGCTGCGGCAGCGGATGTGGACGAGGGTCTTGGAGCATTTTGTGATCT
TTCCGATCGAGGCCGACGTGCCTGGCCTTGTCCGTCCTCCCTCCCTTCCT
CCCTCTCTTTCGGCATCCAGTAGCAAGCAGAACCAGCCGCAACAGCTACA
GTCAAGGGGTCGTCATTTTCATAATTCCAATCTGCTGCCGGGCGTCAGTA
CTATTGCCGGCTTGCCAGTGCCCAACTCGGGATTGTACTCTGAACTTGGT
CTTCCCGACGAGGTCTGCGAAGCAGCTCTTTACCTAGTGGCGCGCGTGAC
CTGGTCGTTAGCCAACACGTTAGGAGTGGAATTGCCTCATCCATTGCGAT
TTCCAGCAGGCAAGCCTTATGCCTTAGTGATGGAGGATGGAAAGGGACGC
ACCGAGTTCGCCCTCAGTCCCTCTATCTACGCCAGCAGCAGCACCACCAC
CACCAATAGCACCAACAGTATCGGCAGAAGCAGACACACCCCTCTCATCA
TAAAAAGGGATTGTGGGAGGGAGGAAGAGGGCACCGACCCCTTTTCCCTC
GCTCTGGAGGCATTGCAGTTTAACGTGCATCGTCTCGCTATCTCCCCTAC
TGCGGTCGGTGTGGACGCGTCGGAGTTATTCGGGAAAGAAGCCCTCTTAT
TGAACCTGTGGGCCATCCAACGGCAAGCTGCTCGGGTCGTCAAAGCATAT
GAGGGATTTCCTGATGTGCCTTTGCCCCAACTAAAAGAAGGGAGGAGGGG
AGAGAGGAAAGAGGCCGAAGTAAGGGGGCAGCATCAGCAGCAGTGTCATC
AGCAGCAGCACGAGCAGGAAGGTGGATGTCAGCAACATCGGCACCAGCTG
CACGGGGGGGCGCCGAGGGTGGTTTTTGAGGACAGGGAGGGATCGGAATG
GAGCTTGGTGGAGCTGCAGAATCAGGTGGATGCTTTTGGAGGAGGAGTTG
GAGGAAGGGGAGGAGAAGGACGGTGAATGAACGAATGTCCCTTGTGTCGT
GCCAGCGCGGGGGACAGGTTGTCCTGTGCGGGGTGCGTCAAGAACACACT
CTACTACAAGCAGCAGGCCGTCGCGTACAAGAAGTTGGCCCTGCTGGACG
CATACGAACAAGCTAAGGTGGTTTTGACGGCACGGCAGCCCATCTTTGAG
GAGGAGCAGGCTGTGGCAGATTTGACGCGGCGGCAAGGGGAGATGCGGAG
ACGCTTGCAAGAGACGGCCGAGAGCGTTCGAGACTTGCGCATTGCCCTGG
CCCGTAAGACCTTTTCGGTGAATGAACGCCGGCGGGCCTTGGCATCAGCC
ATGAGCAAATTAGACGAAGCTAAACGTCAACAAGAAAGCCAGTCCTTCCC
TGTGCTGAAGGGGCTGGAATGGTACAGAGAGCAAGCGATGGAAGCGCTGC
GGCAGCGGATGTGGACGAGGGTCTTGGAGCATTTTGTGATCTTTCCGATC
GAGGCCGACGTGCCTGGCCTTGTCCGTCCTCCCTCCCTTCCTCCCTCTCT
TTCGGCATCCAGTAGCAAGCAGAACCAGCCGCAACAGCTACAGTCAAGGG
GTCGTCATTTTCATAATTCCAATCTGCTGCCGGGCGTCAGTACTATTGCC
GGCTTGCCAGTGCCCAACTCGGGATTGTACTCTGAACTTGGTCTTCCCGA
CGAGGTCTGCGAAGCAGCTCTTTACCTAGTGGCGCGCGTGACCTGGTCGT
TAGCCAACACGTTAGGAGTGGAATTGCCTCATCCATTGCGATTTCCAGCA
GGCAAGCCTTATGCCTTAGTGATGGAGGATGGAAAGGGACGCACCGAGTT
CGCCCTCAGTCCCTCTATCTACGCCAGCAGCAGCACCACCACCACCAATA
GCACCAACAGTATCGGCAGAAGCAGACACACCCCTCTCATCATAAAAAGG
GATTGTGGGAGGGAGGAAGAGGGCACCGACCCCTTTTCCCTCGCTCTGGA
GGCATTGCAGTTTAACGTGCATCGTCTCGCTATCTCCCCTACTGCGGTCG
GTGTGGACGCGTCGGAGTTATTCGGGAAAGAAGCCCTCTTATTGAACCTG
TGGGCCATCCAACGGCAAGCTGCTCGGGTCGTCAAAGCATATGAGGGATT
TCCTGATGTGCCTTTGCCCCAACTAAAAGAAGGGAGGAGGGGAGAGAGGA
AAGAGGCCGAAGTAAGGGGGCAGCATCAGCAGCAGTGTCATCAGCAGCAG
CACGAGCAGGAAGGTGGATGTCAGCAACATCGGCACCAGCTGCACGGGGG
GGCGCCGAGGGTGGTTTTTGAGGACAGGGAGGGATCGGAATGGAGCTTGG
TGGAGCTGCAGAATCAGGTGGATGCTTTTGGAGGAGGAGTTGGAGGAAGG
GGAGGAGAAGGACGGTGA back to top
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