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Properties
Property Name | Value |
TranscriptId | 672693 |
Track | FilteredModels2 |
ProteinId | 672607 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_19 | supercontig | scaffold_19:71167..73610 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_7259 ID=mRNA_7259|Name=jgi.p|Nanoce1779_2|672607|organism=Nannochloropsis oceanica|type=mRNA|length=1423bp ATGATCCTAAGAGGCCTCGGCGTGGACGGCCGCGGGAACTCAACCCCTCT CCTCCTCGTCCTCCTCCTTGTCCTCCATCTCCTCCTACCCTCTGCGCATG CCGAAGACCCACTCATCAATGTCTACATGCGTGGGAGCAGCAGTAGGGTC CCCGCGAACTTTCCTTCTGCCCTTCACTTCGTTGCCGAGATTCCTTCTTG GTCTACGGGGGAAATCTCTTCGGCTGTCCTCAGCGAAACTGGCTTGGCCG ACCTTCGGAAGCAATGCGGCGACGACGTTGGCCTTAGGGAGGAGGACCGC ATCCCCTTCTCCACCACATTCAGTGGCGTGACGCGCATCAAATACGGCTG CCTCAAGGGGTTTTTGGCCTACAACCAACGTTACAAGAAACACGAAGTCC TCCCATTCATGGACACCAAGCAAGTAACGGCCGCCAACGAAAACGAGCAC GTTTCTTTCGAAATGAAAGCCGGTCCCAACGGCATCGACGGCTCCTGGTG GCTTCTCCCCTGGACCGGCAACGCACCCATCGTCCTCAGAGACCTTCAAA GCTGCTTCCCCTCCCCACAGCAGCAATGGTGCACAGAGCCCCAGGATATC AAGCTCGGTGCGCCTTCCCTCCCTCCCTCCCCCCCTTCTTGCCCTTTGGT TTGTGCCTGCCTTGCCCCCTCTTCTTCTTCTCCTCGTTCTCCACCTTTTT ACCTTCCCTCTCTCGCTCCCTCCCTCTCCTTCTTTCCCCTCTCTTCCTCC CTAGCCCCCATGGGTCTCACCGCCGCTGACGTGGTGGAATGGAATCCCAT CGTCCTCCCTCCTTCTTCTTCTCCTCCTCCTCCTCCTTCGCCGCCTTCCC TAGGCGCACCGTTCCAAGGACCGGGGGGATCTGGGCAATCCGGAGCCCCT CAAATAGGAGAAGAGTCGCAAGCAGTAGCACCGGCAGCTCCGGCAGCTCC GGCAGCACCGGCAGCACCTACAGCACCAACGGCACCAACAGCACCAGCAC CAGCACCAGCACCAGCCGCACGAGACGCAGTAAGACAAACACCTCTACCA GCAGCTGCAGCAGCACCGCCACAGTTGTTGCAACTGCGGGGAAACGCTAG AACAGCCTCAGGGAATGATGTATAAAGAGGGAGGGAGGTAAGAAGGGAGA GAGGAAGGAAGGGAGTGAAGTAGGAAAGGGGAAGAAGTTGTTTTTCGACG ACCGGGTGTGCAACACGGCCCAGTCCAGATGGTAAAAGTGAATATGTGCA GGAGTGCTTGTTTTGGTGGGAATGGGCGTAGAGGGCGAGGCATTAGGTTT CGTTTGCTCAAGGGAGGGAGGGAGAGAGGGAGGGAGGTGAAGTATATGGG CCGACAGATGGTATCTTCGCGGTGCCATACAGTGTCAAAATAAAAAGCAA AGATAAATAGGAAAAAGACGTGG back to topprotein sequence of jgi.p|Nanoce1779_2|672607 >mRNA_7259-protein ID=mRNA_7259-protein|Name=jgi.p|Nanoce1779_2|672607|organism=Nannochloropsis oceanica|type=polypeptide|length=375bp MILRGLGVDGRGNSTPLLLVLLLVLHLLLPSAHAEDPLINVYMRGSSSRV PANFPSALHFVAEIPSWSTGEISSAVLSETGLADLRKQCGDDVGLREEDR IPFSTTFSGVTRIKYGCLKGFLAYNQRYKKHEVLPFMDTKQVTAANENEH VSFEMKAGPNGIDGSWWLLPWTGNAPIVLRDLQSCFPSPQQQWCTEPQDI KLGAPSLPPSPPSCPLVCACLAPSSSSPRSPPFYLPSLAPSLSFFPLSSS LAPMGLTAADVVEWNPIVLPPSSSPPPPPSPPSLGAPFQGPGGSGQSGAP QIGEESQAVAPAAPAAPAAPAAPTAPTAPTAPAPAPAPAARDAVRQTPLP AAAAAPPQLLQLRGNARTASGNDV* back to topmRNA from alignment at scaffold_19:71167..73610- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_7259 ID=mRNA_7259|Name=jgi.p|Nanoce1779_2|672607|organism=Nannochloropsis oceanica|type=mRNA|length=2444bp|location=Sequence derived from alignment at scaffold_19:71167..73610- (Nannochloropsis oceanica) ATGATCCTAAGAGGCCTCGGCGTGGACGGCCGCGGGAACTCAACCCCTCT
CCTCCTCGTCCTCCTCCTTGTCCTCCATCTCCTCCTACCCTCTGCGCATG
CCGAAGACCCACTCATCAATGTCTACATGCGTGGGAGCAGCAGTAGGGTA
CGTTTGACTGCTCAGGAAGGATGGAAGGGGGCAAGAGAAGGAGGGCGGGT
GTGGAAGGACGGTTGGACGAGATGAAAGAGGACTGAGGGAAAGGCCCGCA
CGTCCTGTTGGTACCACAACTAACGCTCATTTCCCAACAGTGTTAAGATC
TGTCTCCTGGTCATATGTACCCTCAATACCTTTCTCGATATTTTCCTTCT
ATACTTTTCTTCAAATTTACCCTCCATACTTTCCTTCATATTTACCGCCC
ACACTTTCCCTCCCCCCTCCTTCTCAATGTTCCCGGCCTCCAAACCTCTG
TGGCCCCTTTCTCATCTCCTCTCCTCCCCTCCCCTGCCCTCTCTCCCTCC
TCCCCAGGTCCCCGCGAACTTTCCTTCTGCCCTTCACTTCGTTGCCGAGA
TTCCTTCTTGGTCTACGGGGGAAATCTCTTCGGCTGTCCTCAGCGAAACT
GGTGAGCAAGCGAAAAGGAGGGAGGGCGGGAGGGCGGGAGGGCGGGAGGG
AGGGAAGGAGGGAGGGAAGGAGGGAGGGCGGGAGGGCGGGAGGGAGTGAA
GGAGGGAGGGAGGGAATGCTGGAAGAAAACAAGCCCTGCAAAGGACCAAG
AAAGGAAGAAGGGAGGGAGAGAGGGATGGAAAGAGGGATGGGAAGTGATG
GAGACCGGAATGAGTTTGTCGGCGCCCTTGTCACACTTTTCATTCCCGCC
CTCCCTCCTTATAGGCTTGGCCGACCTTCGGAAGCAATGCGGCGACGACG
TTGGCCTTAGGGAGGAGGACCGCATCCCCTTCTCCACCACATTCAGTGGC
GTGACGCGCATCAAATACGGTACCTCCCTCCCTCCCTCCCTTTCTCCCCC
CCTCTCTCCCTCCCTTTCCTCAGCAGGGGAATGGATGGCCCTGACCCCGT
CGAAGGCAATTTATTCACCCATATATTTATATATATAATTAATGGCACAT
TACTATATATTTTCCCGTGTGCAGGCTCCGACACCTCCACATGCCATTTG
CTGATCCCTCCCTCTCTCTCTCCCTCCCTCCCTCCCTCCCTCCCTCTCTT
CCTCCCTCCCTGGCCCCAGGCTGCCTCAAGGGGTTTTTGGCCTACAACCA
ACGTTACAAGAAACACGAAGTCCTCCCATTCATGGACACCAAGCAAGTAA
CGGCCGCCAACGAAAACGAGCACGTTTCTTTCGAAATGAAAGCCGGTCCC
AACGGCATCGACGTACGTGCCCTTCCTACCTCTTTCCCTCCCTTTCTCCA
TGACACCATCTTATCTTCCCTTTCCTCCTTCTTCCTCCCTCTCTCCCTTC
CTCCCTGCCTCCCTCCCTCCCTCCCTCCTCAGGGCTCCTGGTGGCTTCTC
CCCTGGACCGGCAACGCACCCATCGTCCTCAGAGACCTTCAAAGCTGCTT
CCCCTCCCCACAGCAGCAATGGTGCACAGAGCCCCAGGATATCAAGCTCG
GTGCGCCTTCCCTCCCTCCCTCCCCCCCTTCTTGCCCTTTGGTTTGTGCC
TGCCTTGCCCCCTCTTCTTCTTCTCCTCGTTCTCCACCTTTTTACCTTCC
CTCTCTCGCTCCCTCCCTCTCCTTCTTTCCCCTCTCTTCCTCCCTAGCCC
CCATGGGTCTCACCGCCGCTGACGTGGTGGAATGGAATCCCATCGTCCTC
CCTCCTTCTTCTTCTCCTCCTCCTCCTCCTTCGCCGCCTTCCCTAGGCGC
ACCGTTCCAAGGACCGGGGGGATCTGGGCAATCCGGAGCCCCTCAAATAG
GAGAAGAGTCGCAAGCAGTAGCACCGGCAGCTCCGGCAGCTCCGGCAGCA
CCGGCAGCACCTACAGCACCAACGGCACCAACAGCACCAGCACCAGCACC
AGCACCAGCCGCACGAGACGCAGTAAGACAAACACCTCTACCAGCAGCTG
CAGCAGCACCGCCACAGTTGTTGCAACTGCGGGGAAACGCTAGAACAGCC
TCAGGGAATGATGTATAAAGAGGGAGGGAGGTAAGAAGGGAGAGAGGAAG
GAAGGGAGTGAAGTAGGAAAGGGGAAGAAGTTGTTTTTCGACGACCGGGT
GTGCAACACGGCCCAGTCCAGATGGTAAAAGTGAATATGTGCAGGAGTGC
TTGTTTTGGTGGGAATGGGCGTAGAGGGCGAGGCATTAGGTTTCGTTTGC
TCAAGGGAGGGAGGGAGAGAGGGAGGGAGAGAGGGAGGGAGGGAGAGAGG
GAGGGAGGTGAAGTATATGGGCCGACAGATGGTATCTTCGCGGTGCCATA
CAGTGTCAAAATAAAAAGCAAAGATAAATAGGAAAAAGACGTGG back to topCoding sequence (CDS) from alignment at scaffold_19:71167..73610- >mRNA_7259 ID=mRNA_7259|Name=jgi.p|Nanoce1779_2|672607|organism=Nannochloropsis oceanica|type=CDS|length=5625bp|location=Sequence derived from alignment at scaffold_19:71167..73610- (Nannochloropsis oceanica) GGCTCCTGGTGGCTTCTCCCCTGGACCGGCAACGCACCCATCGTCCTCAG AGACCTTCAAAGCTGCTTCCCCTCCCCACAGCAGCAATGGTGCACAGAGC CCCAGGATATCAAGCTCGGTGCGCCTTCCCTCCCTCCCTCCCCCCCTTCT TGCCCTTTGGTTTGTGCCTGCCTTGCCCCCTCTTCTTCTTCTCCTCGTTC TCCACCTTTTTACCTTCCCTCTCTCGCTCCCTCCCTCTCCTTCTTTCCCC TCTCTTCCTCCCTAGCCCCCATGGGTCTCACCGCCGCTGACGTGGTGGAA TGGAATCCCATCGTCCTCCCTCCTTCTTCTTCTCCTCCTCCTCCTCCTTC GCCGCCTTCCCTAGGCGCACCGTTCCAAGGACCGGGGGGATCTGGGCAAT CCGGAGCCCCTCAAATAGGAGAAGAGTCGCAAGCAGTAGCACCGGCAGCT CCGGCAGCTCCGGCAGCACCGGCAGCACCTACAGCACCAACGGCACCAAC AGCACCAGCACCAGCACCAGCACCAGCCGCACGAGACGCAGTAAGACAAA CACCTCTACCAGCAGCTGCAGCAGCACCGCCACAGTTGTTGCAACTGCGG GGAAACGCTAGAACAGCCTCAGGGAATGATGTATAAGCTGCCTCAAGGGG TTTTTGGCCTACAACCAACGTTACAAGAAACACGAAGTCCTCCCATTCAT GGACACCAAGCAAGTAACGGCCGCCAACGAAAACGAGCACGTTTCTTTCG AAATGAAAGCCGGTCCCAACGGCATCGACGCTTGGCCGACCTTCGGAAGC AATGCGGCGACGACGTTGGCCTTAGGGAGGAGGACCGCATCCCCTTCTCC ACCACATTCAGTGGCGTGACGCGCATCAAATACGGTCCCCGCGAACTTTC CTTCTGCCCTTCACTTCGTTGCCGAGATTCCTTCTTGGTCTACGGGGGAA ATCTCTTCGGCTGTCCTCAGCGAAACTGATGATCCTAAGAGGCCTCGGCG TGGACGGCCGCGGGAACTCAACCCCTCTCCTCCTCGTCCTCCTCCTTGTC CTCCATCTCCTCCTACCCTCTGCGCATGCCGAAGACCCACTCATCAATGT CTACATGCGTGGGAGCAGCAGTAGGGGCTCCTGGTGGCTTCTCCCCTGGA CCGGCAACGCACCCATCGTCCTCAGAGACCTTCAAAGCTGCTTCCCCTCC CCACAGCAGCAATGGTGCACAGAGCCCCAGGATATCAAGCTCGGTGCGCC TTCCCTCCCTCCCTCCCCCCCTTCTTGCCCTTTGGTTTGTGCCTGCCTTG CCCCCTCTTCTTCTTCTCCTCGTTCTCCACCTTTTTACCTTCCCTCTCTC GCTCCCTCCCTCTCCTTCTTTCCCCTCTCTTCCTCCCTAGCCCCCATGGG TCTCACCGCCGCTGACGTGGTGGAATGGAATCCCATCGTCCTCCCTCCTT CTTCTTCTCCTCCTCCTCCTCCTTCGCCGCCTTCCCTAGGCGCACCGTTC CAAGGACCGGGGGGATCTGGGCAATCCGGAGCCCCTCAAATAGGAGAAGA GTCGCAAGCAGTAGCACCGGCAGCTCCGGCAGCTCCGGCAGCACCGGCAG CACCTACAGCACCAACGGCACCAACAGCACCAGCACCAGCACCAGCACCA GCCGCACGAGACGCAGTAAGACAAACACCTCTACCAGCAGCTGCAGCAGC ACCGCCACAGTTGTTGCAACTGCGGGGAAACGCTAGAACAGCCTCAGGGA ATGATGTATAAGCTGCCTCAAGGGGTTTTTGGCCTACAACCAACGTTACA AGAAACACGAAGTCCTCCCATTCATGGACACCAAGCAAGTAACGGCCGCC AACGAAAACGAGCACGTTTCTTTCGAAATGAAAGCCGGTCCCAACGGCAT CGACGCTTGGCCGACCTTCGGAAGCAATGCGGCGACGACGTTGGCCTTAG GGAGGAGGACCGCATCCCCTTCTCCACCACATTCAGTGGCGTGACGCGCA TCAAATACGGTCCCCGCGAACTTTCCTTCTGCCCTTCACTTCGTTGCCGA GATTCCTTCTTGGTCTACGGGGGAAATCTCTTCGGCTGTCCTCAGCGAAA CTGATGATCCTAAGAGGCCTCGGCGTGGACGGCCGCGGGAACTCAACCCC TCTCCTCCTCGTCCTCCTCCTTGTCCTCCATCTCCTCCTACCCTCTGCGC ATGCCGAAGACCCACTCATCAATGTCTACATGCGTGGGAGCAGCAGTAGG GGCTCCTGGTGGCTTCTCCCCTGGACCGGCAACGCACCCATCGTCCTCAG AGACCTTCAAAGCTGCTTCCCCTCCCCACAGCAGCAATGGTGCACAGAGC CCCAGGATATCAAGCTCGGTGCGCCTTCCCTCCCTCCCTCCCCCCCTTCT TGCCCTTTGGTTTGTGCCTGCCTTGCCCCCTCTTCTTCTTCTCCTCGTTC TCCACCTTTTTACCTTCCCTCTCTCGCTCCCTCCCTCTCCTTCTTTCCCC TCTCTTCCTCCCTAGCCCCCATGGGTCTCACCGCCGCTGACGTGGTGGAA TGGAATCCCATCGTCCTCCCTCCTTCTTCTTCTCCTCCTCCTCCTCCTTC GCCGCCTTCCCTAGGCGCACCGTTCCAAGGACCGGGGGGATCTGGGCAAT CCGGAGCCCCTCAAATAGGAGAAGAGTCGCAAGCAGTAGCACCGGCAGCT CCGGCAGCTCCGGCAGCACCGGCAGCACCTACAGCACCAACGGCACCAAC AGCACCAGCACCAGCACCAGCACCAGCCGCACGAGACGCAGTAAGACAAA CACCTCTACCAGCAGCTGCAGCAGCACCGCCACAGTTGTTGCAACTGCGG GGAAACGCTAGAACAGCCTCAGGGAATGATGTATAAGCTGCCTCAAGGGG TTTTTGGCCTACAACCAACGTTACAAGAAACACGAAGTCCTCCCATTCAT GGACACCAAGCAAGTAACGGCCGCCAACGAAAACGAGCACGTTTCTTTCG AAATGAAAGCCGGTCCCAACGGCATCGACGCTTGGCCGACCTTCGGAAGC AATGCGGCGACGACGTTGGCCTTAGGGAGGAGGACCGCATCCCCTTCTCC ACCACATTCAGTGGCGTGACGCGCATCAAATACGGTCCCCGCGAACTTTC CTTCTGCCCTTCACTTCGTTGCCGAGATTCCTTCTTGGTCTACGGGGGAA ATCTCTTCGGCTGTCCTCAGCGAAACTGATGATCCTAAGAGGCCTCGGCG TGGACGGCCGCGGGAACTCAACCCCTCTCCTCCTCGTCCTCCTCCTTGTC CTCCATCTCCTCCTACCCTCTGCGCATGCCGAAGACCCACTCATCAATGT CTACATGCGTGGGAGCAGCAGTAGGGGCTCCTGGTGGCTTCTCCCCTGGA CCGGCAACGCACCCATCGTCCTCAGAGACCTTCAAAGCTGCTTCCCCTCC CCACAGCAGCAATGGTGCACAGAGCCCCAGGATATCAAGCTCGGTGCGCC TTCCCTCCCTCCCTCCCCCCCTTCTTGCCCTTTGGTTTGTGCCTGCCTTG CCCCCTCTTCTTCTTCTCCTCGTTCTCCACCTTTTTACCTTCCCTCTCTC GCTCCCTCCCTCTCCTTCTTTCCCCTCTCTTCCTCCCTAGCCCCCATGGG TCTCACCGCCGCTGACGTGGTGGAATGGAATCCCATCGTCCTCCCTCCTT CTTCTTCTCCTCCTCCTCCTCCTTCGCCGCCTTCCCTAGGCGCACCGTTC CAAGGACCGGGGGGATCTGGGCAATCCGGAGCCCCTCAAATAGGAGAAGA GTCGCAAGCAGTAGCACCGGCAGCTCCGGCAGCTCCGGCAGCACCGGCAG CACCTACAGCACCAACGGCACCAACAGCACCAGCACCAGCACCAGCACCA GCCGCACGAGACGCAGTAAGACAAACACCTCTACCAGCAGCTGCAGCAGC ACCGCCACAGTTGTTGCAACTGCGGGGAAACGCTAGAACAGCCTCAGGGA ATGATGTATAAGCTGCCTCAAGGGGTTTTTGGCCTACAACCAACGTTACA AGAAACACGAAGTCCTCCCATTCATGGACACCAAGCAAGTAACGGCCGCC AACGAAAACGAGCACGTTTCTTTCGAAATGAAAGCCGGTCCCAACGGCAT CGACGCTTGGCCGACCTTCGGAAGCAATGCGGCGACGACGTTGGCCTTAG GGAGGAGGACCGCATCCCCTTCTCCACCACATTCAGTGGCGTGACGCGCA TCAAATACGGTCCCCGCGAACTTTCCTTCTGCCCTTCACTTCGTTGCCGA GATTCCTTCTTGGTCTACGGGGGAAATCTCTTCGGCTGTCCTCAGCGAAA CTGATGATCCTAAGAGGCCTCGGCGTGGACGGCCGCGGGAACTCAACCCC TCTCCTCCTCGTCCTCCTCCTTGTCCTCCATCTCCTCCTACCCTCTGCGC ATGCCGAAGACCCACTCATCAATGTCTACATGCGTGGGAGCAGCAGTAGG GGCTCCTGGTGGCTTCTCCCCTGGACCGGCAACGCACCCATCGTCCTCAG AGACCTTCAAAGCTGCTTCCCCTCCCCACAGCAGCAATGGTGCACAGAGC CCCAGGATATCAAGCTCGGTGCGCCTTCCCTCCCTCCCTCCCCCCCTTCT TGCCCTTTGGTTTGTGCCTGCCTTGCCCCCTCTTCTTCTTCTCCTCGTTC TCCACCTTTTTACCTTCCCTCTCTCGCTCCCTCCCTCTCCTTCTTTCCCC TCTCTTCCTCCCTAGCCCCCATGGGTCTCACCGCCGCTGACGTGGTGGAA TGGAATCCCATCGTCCTCCCTCCTTCTTCTTCTCCTCCTCCTCCTCCTTC GCCGCCTTCCCTAGGCGCACCGTTCCAAGGACCGGGGGGATCTGGGCAAT CCGGAGCCCCTCAAATAGGAGAAGAGTCGCAAGCAGTAGCACCGGCAGCT CCGGCAGCTCCGGCAGCACCGGCAGCACCTACAGCACCAACGGCACCAAC AGCACCAGCACCAGCACCAGCACCAGCCGCACGAGACGCAGTAAGACAAA CACCTCTACCAGCAGCTGCAGCAGCACCGCCACAGTTGTTGCAACTGCGG GGAAACGCTAGAACAGCCTCAGGGAATGATGTATAAGCTGCCTCAAGGGG TTTTTGGCCTACAACCAACGTTACAAGAAACACGAAGTCCTCCCATTCAT GGACACCAAGCAAGTAACGGCCGCCAACGAAAACGAGCACGTTTCTTTCG AAATGAAAGCCGGTCCCAACGGCATCGACGCTTGGCCGACCTTCGGAAGC AATGCGGCGACGACGTTGGCCTTAGGGAGGAGGACCGCATCCCCTTCTCC ACCACATTCAGTGGCGTGACGCGCATCAAATACGGTCCCCGCGAACTTTC CTTCTGCCCTTCACTTCGTTGCCGAGATTCCTTCTTGGTCTACGGGGGAA ATCTCTTCGGCTGTCCTCAGCGAAACTGATGATCCTAAGAGGCCTCGGCG TGGACGGCCGCGGGAACTCAACCCCTCTCCTCCTCGTCCTCCTCCTTGTC CTCCATCTCCTCCTACCCTCTGCGCATGCCGAAGACCCACTCATCAATGT CTACATGCGTGGGAGCAGCAGTAGG back to top
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