jgi.p|Nanoce1779_2|596288, mRNA_6776 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|596288
Unique Name	mRNA_6776
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	4261
Alignment location	scaffold_17:70294..74554 -

Link to JBrowse

Properties


Property Name	Value
TranscriptId	596374
Track	FilteredModels2
ProteinId	596288

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_17	supercontig	scaffold_17:70294..74554 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|596288	gene_6776	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|596288	mRNA_6776-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_6776	CDS_6776	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_17:70294..74554-
coding sequence from alignment at scaffold_17:70294..74554-

mRNA sequence

>mRNA_6776 ID=mRNA_6776|Name=jgi.p|Nanoce1779_2|596288|organism=Nannochloropsis oceanica|type=mRNA|length=4261bp
ACAGGCCGACATTAAAAGGCTTCCGGAGGCCTTACTGGCCATGGGGGTAG
ATGAGTTCTTCGCTCTGGTTCAAACCAATGTGGCCTCTTTGCGCAAGCGT
AATCCTGCCTACGATGGCAGCATGCGAGGCCGCTTCGACATCCTCGGCCC
CGTGCCACGTTCCTGGGTGCTGGACCTGCATCGCGAGGCAGCTCATGTGG
CGATGGAGGTGGCCCCTGACAGCGCAGGCTCTATGCCAAAGCCCGACTTT
ACACTCACGTGCGAATCGGAAGCAGTGCTGCTTGAGGCGCTCAGGGGCAA
GCGGGAGTTTACCGCAGCCATGACCAGGCGGCAGCTCCGGGTACACGGCA
ACTTTGCCAAGCTGGGCAAGCTCAAAGATGTCTTTGAGGCCGCTCCGGAG
GGTAACGAGAATGGGGACGGGGAGGACAACCAGACGCCCATGCTGGTGCC
GGTGCCGAAAAGCCAATGGGAGCCCGATGGGCCACAGTGCAGTCAATGCG
GGGCAGGCTTTTCCCTGACCACCCGGCGACACCACTGTCGCTTTTGCGGG
GCACTGTGCTGTGCCGATTGCACCCGCTTCCGTCTCAGCCACAAGCAAAA
GCGGGCTTGCATGCTGTGTCACTTGGCCGTTCAGCGGGCGCGGCGGGAAT
ACGAAGAGAACGGAAGCAGCGGTGGAGTGGGTAATGGCGTGGACAGAGTG
GCACCTTTCTCACCGACTAGTAGCGCCTTCGGGCCGGACTACGGCCAGGA
TATGACGGAGCGCATGCTGACACTGGAGAGCCGGCTCGGGTCGTTGGAGC
GGGCGAGGCGAGTAAAGAAGGCAAGGACACTGCTCAAGTGTGCTGACTGG
GTCATTCGCAGTGCTACGGCATCCATGCTTTTTTCGGGTATTTTTGTAGG
TCACTACCTTGCTTTGATTGTGCAGATGCGCGGATGGGATGTGAGGGTTA
TGGAGCTTCTGCAGCCGGGGTTGGGGGTGGTCGTGGAGTGGCTAGAGCCC
TCATCCTTTTCGTCGTGGACGGGTCAGTTTTTGGCAGCCCCATTGGCCTA
CCTCAAGCAATTGTACGAGCAGCATCCCACCAGCATCGACTCCTACTGGT
TTGTTTTGCTGTTGACCGTGCTGGCCACCCTTCTGTTGGTCACGTCCACG
CTGTGCCGACGAAGCACTACGGCCTTCAGCGTGGCGGCAGTGTTGGTGGT
GGCGATCGAGCTGACAAAAGTACGGGTGAGAACGCGTCTGGCCGCAGAAT
CGGAAGCCGTGTGGGAAGAAGCGAATTATATTTATGGCGCTTACCTCCGC
CTTGCCTTCTTCCGATTGAAAGGCAGCTACATCAAAATGGCGCAATATAT
CTCATCCCGGGCTGACATCGTCCCAGATGCCTTCTCCGACGAGCTCTCCG
CCTTGCAGGACGCTGTACCTCCCTCTCCGCTGGCAGCCATCCGGCCCACC
ATCGAACGTGCTCTTGGTTCTAAATTAGATGAGGCTTTCTTCAGCTTTGA
GTCCGAAGCGTTGGCTTCTGCATCTATCGCTCAAGTGCATCGGGCGACTC
TCAAGGACGGGACGGAGGTGGTGGTGAAGGTGCAGCATCCGGACGTGGCC
CAGCTTCTGGGCATTGATCTGCGGAATATCGTCGTCATCTTGACAGTAAT
TGGTTGGATTGAGCCGGACTATGACTTCAGCATGGTTGCGCACGAGTGGA
GCAAGGAGGTGCAGAAAGAGCTGAATTTTAAAATGGAGGGAGAAAATCTG
CGGATGGCTTACGAGGGAATAGTGCAAAGGTCGGGCTTGGATGCGGTGGT
ACCTCGGGTTTTGCACGCCTCGTCAGATGTGTTGGTCATGACATATTGTG
ATGGCGTCAAGGTTACGGACCCACGCGCTTTCCCCAACCCGGAGACTGCA
GCGGAGGACAAGGCATTGTTCATGAAGATACTGTGTGAGGTTTTCGCCTA
TGGCTGCTACATCGAAGGCTTTTTCCAGGGAGACCCTCATGCCGGGAATA
TTCACGTGCAGGCTTATGTAGACGCGGACGGGCATCGACACTGTCGGCCT
GTTGTGCTGGATTGGGGGCTGGCGAAGAAGCTCTCAGAGCATGTGCGGGT
GGGTAATGCGAAGATTGTGCTGTCAGTTTGGGAGCTAGACATGGGGGGCA
TGTTGGATGGTATGGAAGAGGTAGGGATGCCGATTGACTTAATTAATGTG
GTGGAGGACGTAGGAAATATCCGATTTATGATGCGGAACACCTCCCCAGG
GGCTGAAGCGCGGGAGCAGTCGAAGCAGTTCATGGAAGACTTCGTCGAGA
AATCCAAGCGCAAGCCCAAGAGCGAGCGGAACCCTCTCAAGACCATGGTG
CCCGAGCTCCTCTTCCTTGCCCGGGTCACAGAGATGCTTCAAGGGCTAGG
TGCCAAGCTCGGCGTCCGCGTCGAATACATGCATATCATGGCCGCCAGCT
GCAAACGCGCCCTGCTCCAGCGGCCTCGGCCCTCCCTGTCCTCCGACTCC
ATGTCCTCCCCACCAGCTTTATCTTTTTTGGATCGAAAGGTGCGGGTTTT
GCTGCAGGACCTACTGGCGGAAGGTCACGGGATGGGCGCACAGGTGGTGC
TATATAAGAATGGGCGGATGCTGGTCAATGCTGCGGAGGGGCTGCGCAGT
CGCTTGGATCCGGGAAGGGTCACACCTGCGACGCTGTTTTGTGGCTTTAG
TTTGACCAAAGCCGTGCTTGCCATTTTAGCTCATGCCCTGGTTGATGATA
ATGTGTTAAGCTATGACACATTGCTGGTGGAGGTCTGCCCGGAGCTGAAG
GGGACGGGCAAAGACAATGTGACGTTGCGGCAGATCCTGACTCACAGCGC
CGGGTTGCAGTATGCTTTTCCTAGCAATGCTACGCCACAAGCGTTGTGGA
AACCTCACACAGGCATTGAGACCATAAAGGAGGCGCGGCCTTTGGGTGTT
AAAGCTGGAGAAGGGAAGCCCAGCATGCGCACGCAAGTGGCCATGCATTA
CTACAGCTTTGGTTGGCTGCTGGTACCGGTGCTGGAGAGGGCTTCGGGCA
AATCACTCGCACAACTGGTGCATGAAAAGCTTCTGGTGCCCTTGGGTCTC
CAGCCGGCCAATGATAAGGACCTGAGCGGCATCATTCTGGGCCCTGTGCC
CGGCACGAACGAGCTGGCCTCGTCGGACGATCCACGCTTAGCGCGTGTTG
AGTACGATTTGCGGCAGCTGGTGGCAGAATTGTCGGGAGATTCGGATGGG
GACATAGGAGCCAATATGGGTGGGGGGCTGATGGATATGGTGGAGGGCAT
GATGGACTTTGAAGACGGGGAGGAAGGGGCGGAGGAGGCTGCAGCGTTCA
AGGAGCTTGCGAGGACTAAGTTGGCAGGACGTGAATTTTTGCTGGATCAT
CGTATTCTGAATGGCAAACGGTGTCGATCTTCCGGGGCGTTGCCGTCGTT
AAGCGGCCGCTTCACTGCGCGTGCCCTTGCCGACATTCTAGAATCCTTAT
GCCGGTTGGAGCGAAGCTCGGGAAATTTTATCCAGCAGCAATTCTTGGCC
ACCACTACCACCTCATCTGTTACATCAGGTTCTGCTGCCTCTCCCTCGAA
GACCACCATCACATTTTCTTTAAAACAAGGCGGGAATGGTGGTGGAGGCA
TGGCTTACAACAAGTCTGCGTCCTCTCTGGCTGCCACGCCTGCTGGTTTG
TCCCCTGGCACCTCACCCTTCTCCATCCTCAGCTTGACCCGTCTCCAGGA
CATGAAGGCTAACCCCATGGACGATGCACCAGGCCTTACTCGATTGATGG
GGAGGGAGAACACTATCAAATTAGGATGTGGCGTGCAGTTATTTGGATTT
GAGGCCCCCATGGCAGGCACGTCACAGACGGTGGGTGAAGGCAGTGCTGC
TGGAGAGGCGAGCAATGTCACAACGCGGACCGTCCGATGGGGAAGTGCGT
ACGGCCACGCCGGTGCATGTGGGCAGCTGGCATTGTGTGACCCGAGCACA
GGGGTGGTGCTTGTGGTAACTTCCAACAAGGCGGCGACACCCGGGCAGAA
AAATGTTGGGTACGAGGTGCTGAGTCTGGTGGCGGAGGAGCTGAACCTTG
GGAAGCCGTTGCCAATCTGGTAGGTCATGCGGTGGGAAGGGAAGCATGGT
CGAAGGGAAGCATGATCGAGCGGAAGGAGATACTCTCCAAATTAATGTAT
CAGCTGCCCTATGAGATTGAAAAATGCAAAGTGGAATGTAAACGTCTTTT
CTGTACACAAA

protein sequence of jgi.p|Nanoce1779_2|596288

>mRNA_6776-protein ID=mRNA_6776-protein|Name=jgi.p|Nanoce1779_2|596288|organism=Nannochloropsis oceanica|type=polypeptide|length=1361bp
MGVDEFFALVQTNVASLRKRNPAYDGSMRGRFDILGPVPRSWVLDLHREA
AHVAMEVAPDSAGSMPKPDFTLTCESEAVLLEALRGKREFTAAMTRRQLR
VHGNFAKLGKLKDVFEAAPEGNENGDGEDNQTPMLVPVPKSQWEPDGPQC
SQCGAGFSLTTRRHHCRFCGALCCADCTRFRLSHKQKRACMLCHLAVQRA
RREYEENGSSGGVGNGVDRVAPFSPTSSAFGPDYGQDMTERMLTLESRLG
SLERARRVKKARTLLKCADWVIRSATASMLFSGIFVGHYLALIVQMRGWD
VRVMELLQPGLGVVVEWLEPSSFSSWTGQFLAAPLAYLKQLYEQHPTSID
SYWFVLLLTVLATLLLVTSTLCRRSTTAFSVAAVLVVAIELTKVRVRTRL
AAESEAVWEEANYIYGAYLRLAFFRLKGSYIKMAQYISSRADIVPDAFSD
ELSALQDAVPPSPLAAIRPTIERALGSKLDEAFFSFESEALASASIAQVH
RATLKDGTEVVVKVQHPDVAQLLGIDLRNIVVILTVIGWIEPDYDFSMVA
HEWSKEVQKELNFKMEGENLRMAYEGIVQRSGLDAVVPRVLHASSDVLVM
TYCDGVKVTDPRAFPNPETAAEDKALFMKILCEVFAYGCYIEGFFQGDPH
AGNIHVQAYVDADGHRHCRPVVLDWGLAKKLSEHVRVGNAKIVLSVWELD
MGGMLDGMEEVGMPIDLINVVEDVGNIRFMMRNTSPGAEAREQSKQFMED
FVEKSKRKPKSERNPLKTMVPELLFLARVTEMLQGLGAKLGVRVEYMHIM
AASCKRALLQRPRPSLSSDSMSSPPALSFLDRKVRVLLQDLLAEGHGMGA
QVVLYKNGRMLVNAAEGLRSRLDPGRVTPATLFCGFSLTKAVLAILAHAL
VDDNVLSYDTLLVEVCPELKGTGKDNVTLRQILTHSAGLQYAFPSNATPQ
ALWKPHTGIETIKEARPLGVKAGEGKPSMRTQVAMHYYSFGWLLVPVLER
ASGKSLAQLVHEKLLVPLGLQPANDKDLSGIILGPVPGTNELASSDDPRL
ARVEYDLRQLVAELSGDSDGDIGANMGGGLMDMVEGMMDFEDGEEGAEEA
AAFKELARTKLAGREFLLDHRILNGKRCRSSGALPSLSGRFTARALADIL
ESLCRLERSSGNFIQQQFLATTTTSSVTSGSAASPSKTTITFSLKQGGNG
GGGMAYNKSASSLAATPAGLSPGTSPFSILSLTRLQDMKANPMDDAPGLT
RLMGRENTIKLGCGVQLFGFEAPMAGTSQTVGEGSAAGEASNVTTRTVRW
GSAYGHAGACGQLALCDPSTGVVLVVTSNKAATPGQKNVGYEVLSLVAEE
LNLGKPLPIW*

mRNA from alignment at scaffold_17:70294..74554-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_6776 ID=mRNA_6776|Name=jgi.p|Nanoce1779_2|596288|organism=Nannochloropsis oceanica|type=mRNA|length=4261bp|location=Sequence derived from alignment at scaffold_17:70294..74554- (Nannochloropsis oceanica)
ACAGGCCGACATTAAAAGGCTTCCGGAGGCCTTACTGGCCATGGGGGTAG
ATGAGTTCTTCGCTCTGGTTCAAACCAATGTGGCCTCTTTGCGCAAGCGT
AATCCTGCCTACGATGGCAGCATGCGAGGCCGCTTCGACATCCTCGGCCC
CGTGCCACGTTCCTGGGTGCTGGACCTGCATCGCGAGGCAGCTCATGTGG
CGATGGAGGTGGCCCCTGACAGCGCAGGCTCTATGCCAAAGCCCGACTTT
ACACTCACGTGCGAATCGGAAGCAGTGCTGCTTGAGGCGCTCAGGGGCAA
GCGGGAGTTTACCGCAGCCATGACCAGGCGGCAGCTCCGGGTACACGGCA
ACTTTGCCAAGCTGGGCAAGCTCAAAGATGTCTTTGAGGCCGCTCCGGAG
GGTAACGAGAATGGGGACGGGGAGGACAACCAGACGCCCATGCTGGTGCC
GGTGCCGAAAAGCCAATGGGAGCCCGATGGGCCACAGTGCAGTCAATGCG
GGGCAGGCTTTTCCCTGACCACCCGGCGACACCACTGTCGCTTTTGCGGG
GCACTGTGCTGTGCCGATTGCACCCGCTTCCGTCTCAGCCACAAGCAAAA
GCGGGCTTGCATGCTGTGTCACTTGGCCGTTCAGCGGGCGCGGCGGGAAT
ACGAAGAGAACGGAAGCAGCGGTGGAGTGGGTAATGGCGTGGACAGAGTG
GCACCTTTCTCACCGACTAGTAGCGCCTTCGGGCCGGACTACGGCCAGGA
TATGACGGAGCGCATGCTGACACTGGAGAGCCGGCTCGGGTCGTTGGAGC
GGGCGAGGCGAGTAAAGAAGGCAAGGACACTGCTCAAGTGTGCTGACTGG
GTCATTCGCAGTGCTACGGCATCCATGCTTTTTTCGGGTATTTTTGTAGG
TCACTACCTTGCTTTGATTGTGCAGATGCGCGGATGGGATGTGAGGGTTA
TGGAGCTTCTGCAGCCGGGGTTGGGGGTGGTCGTGGAGTGGCTAGAGCCC
TCATCCTTTTCGTCGTGGACGGGTCAGTTTTTGGCAGCCCCATTGGCCTA
CCTCAAGCAATTGTACGAGCAGCATCCCACCAGCATCGACTCCTACTGGT
TTGTTTTGCTGTTGACCGTGCTGGCCACCCTTCTGTTGGTCACGTCCACG
CTGTGCCGACGAAGCACTACGGCCTTCAGCGTGGCGGCAGTGTTGGTGGT
GGCGATCGAGCTGACAAAAGTACGGGTGAGAACGCGTCTGGCCGCAGAAT
CGGAAGCCGTGTGGGAAGAAGCGAATTATATTTATGGCGCTTACCTCCGC
CTTGCCTTCTTCCGATTGAAAGGCAGCTACATCAAAATGGCGCAATATAT
CTCATCCCGGGCTGACATCGTCCCAGATGCCTTCTCCGACGAGCTCTCCG
CCTTGCAGGACGCTGTACCTCCCTCTCCGCTGGCAGCCATCCGGCCCACC
ATCGAACGTGCTCTTGGTTCTAAATTAGATGAGGCTTTCTTCAGCTTTGA
GTCCGAAGCGTTGGCTTCTGCATCTATCGCTCAAGTGCATCGGGCGACTC
TCAAGGACGGGACGGAGGTGGTGGTGAAGGTGCAGCATCCGGACGTGGCC
CAGCTTCTGGGCATTGATCTGCGGAATATCGTCGTCATCTTGACAGTAAT
TGGTTGGATTGAGCCGGACTATGACTTCAGCATGGTTGCGCACGAGTGGA
GCAAGGAGGTGCAGAAAGAGCTGAATTTTAAAATGGAGGGAGAAAATCTG
CGGATGGCTTACGAGGGAATAGTGCAAAGGTCGGGCTTGGATGCGGTGGT
ACCTCGGGTTTTGCACGCCTCGTCAGATGTGTTGGTCATGACATATTGTG
ATGGCGTCAAGGTTACGGACCCACGCGCTTTCCCCAACCCGGAGACTGCA
GCGGAGGACAAGGCATTGTTCATGAAGATACTGTGTGAGGTTTTCGCCTA
TGGCTGCTACATCGAAGGCTTTTTCCAGGGAGACCCTCATGCCGGGAATA
TTCACGTGCAGGCTTATGTAGACGCGGACGGGCATCGACACTGTCGGCCT
GTTGTGCTGGATTGGGGGCTGGCGAAGAAGCTCTCAGAGCATGTGCGGGT
GGGTAATGCGAAGATTGTGCTGTCAGTTTGGGAGCTAGACATGGGGGGCA
TGTTGGATGGTATGGAAGAGGTAGGGATGCCGATTGACTTAATTAATGTG
GTGGAGGACGTAGGAAATATCCGATTTATGATGCGGAACACCTCCCCAGG
GGCTGAAGCGCGGGAGCAGTCGAAGCAGTTCATGGAAGACTTCGTCGAGA
AATCCAAGCGCAAGCCCAAGAGCGAGCGGAACCCTCTCAAGACCATGGTG
CCCGAGCTCCTCTTCCTTGCCCGGGTCACAGAGATGCTTCAAGGGCTAGG
TGCCAAGCTCGGCGTCCGCGTCGAATACATGCATATCATGGCCGCCAGCT
GCAAACGCGCCCTGCTCCAGCGGCCTCGGCCCTCCCTGTCCTCCGACTCC
ATGTCCTCCCCACCAGCTTTATCTTTTTTGGATCGAAAGGTGCGGGTTTT
GCTGCAGGACCTACTGGCGGAAGGTCACGGGATGGGCGCACAGGTGGTGC
TATATAAGAATGGGCGGATGCTGGTCAATGCTGCGGAGGGGCTGCGCAGT
CGCTTGGATCCGGGAAGGGTCACACCTGCGACGCTGTTTTGTGGCTTTAG
TTTGACCAAAGCCGTGCTTGCCATTTTAGCTCATGCCCTGGTTGATGATA
ATGTGTTAAGCTATGACACATTGCTGGTGGAGGTCTGCCCGGAGCTGAAG
GGGACGGGCAAAGACAATGTGACGTTGCGGCAGATCCTGACTCACAGCGC
CGGGTTGCAGTATGCTTTTCCTAGCAATGCTACGCCACAAGCGTTGTGGA
AACCTCACACAGGCATTGAGACCATAAAGGAGGCGCGGCCTTTGGGTGTT
AAAGCTGGAGAAGGGAAGCCCAGCATGCGCACGCAAGTGGCCATGCATTA
CTACAGCTTTGGTTGGCTGCTGGTACCGGTGCTGGAGAGGGCTTCGGGCA
AATCACTCGCACAACTGGTGCATGAAAAGCTTCTGGTGCCCTTGGGTCTC
CAGCCGGCCAATGATAAGGACCTGAGCGGCATCATTCTGGGCCCTGTGCC
CGGCACGAACGAGCTGGCCTCGTCGGACGATCCACGCTTAGCGCGTGTTG
AGTACGATTTGCGGCAGCTGGTGGCAGAATTGTCGGGAGATTCGGATGGG
GACATAGGAGCCAATATGGGTGGGGGGCTGATGGATATGGTGGAGGGCAT
GATGGACTTTGAAGACGGGGAGGAAGGGGCGGAGGAGGCTGCAGCGTTCA
AGGAGCTTGCGAGGACTAAGTTGGCAGGACGTGAATTTTTGCTGGATCAT
CGTATTCTGAATGGCAAACGGTGTCGATCTTCCGGGGCGTTGCCGTCGTT
AAGCGGCCGCTTCACTGCGCGTGCCCTTGCCGACATTCTAGAATCCTTAT
GCCGGTTGGAGCGAAGCTCGGGAAATTTTATCCAGCAGCAATTCTTGGCC
ACCACTACCACCTCATCTGTTACATCAGGTTCTGCTGCCTCTCCCTCGAA
GACCACCATCACATTTTCTTTAAAACAAGGCGGGAATGGTGGTGGAGGCA
TGGCTTACAACAAGTCTGCGTCCTCTCTGGCTGCCACGCCTGCTGGTTTG
TCCCCTGGCACCTCACCCTTCTCCATCCTCAGCTTGACCCGTCTCCAGGA
CATGAAGGCTAACCCCATGGACGATGCACCAGGCCTTACTCGATTGATGG
GGAGGGAGAACACTATCAAATTAGGATGTGGCGTGCAGTTATTTGGATTT
GAGGCCCCCATGGCAGGCACGTCACAGACGGTGGGTGAAGGCAGTGCTGC
TGGAGAGGCGAGCAATGTCACAACGCGGACCGTCCGATGGGGAAGTGCGT
ACGGCCACGCCGGTGCATGTGGGCAGCTGGCATTGTGTGACCCGAGCACA
GGGGTGGTGCTTGTGGTAACTTCCAACAAGGCGGCGACACCCGGGCAGAA
AAATGTTGGGTACGAGGTGCTGAGTCTGGTGGCGGAGGAGCTGAACCTTG
GGAAGCCGTTGCCAATCTGGTAGGTCATGCGGTGGGAAGGGAAGCATGGT
CGAAGGGAAGCATGATCGAGCGGAAGGAGATACTCTCCAAATTAATGTAT
CAGCTGCCCTATGAGATTGAAAAATGCAAAGTGGAATGTAAACGTCTTTT
CTGTACACAAA

Coding sequence (CDS) from alignment at scaffold_17:70294..74554-

>mRNA_6776 ID=mRNA_6776|Name=jgi.p|Nanoce1779_2|596288|organism=Nannochloropsis oceanica|type=CDS|length=4083bp|location=Sequence derived from alignment at scaffold_17:70294..74554- (Nannochloropsis oceanica)
ATGGGGGTAGATGAGTTCTTCGCTCTGGTTCAAACCAATGTGGCCTCTTT
GCGCAAGCGTAATCCTGCCTACGATGGCAGCATGCGAGGCCGCTTCGACA
TCCTCGGCCCCGTGCCACGTTCCTGGGTGCTGGACCTGCATCGCGAGGCA
GCTCATGTGGCGATGGAGGTGGCCCCTGACAGCGCAGGCTCTATGCCAAA
GCCCGACTTTACACTCACGTGCGAATCGGAAGCAGTGCTGCTTGAGGCGC
TCAGGGGCAAGCGGGAGTTTACCGCAGCCATGACCAGGCGGCAGCTCCGG
GTACACGGCAACTTTGCCAAGCTGGGCAAGCTCAAAGATGTCTTTGAGGC
CGCTCCGGAGGGTAACGAGAATGGGGACGGGGAGGACAACCAGACGCCCA
TGCTGGTGCCGGTGCCGAAAAGCCAATGGGAGCCCGATGGGCCACAGTGC
AGTCAATGCGGGGCAGGCTTTTCCCTGACCACCCGGCGACACCACTGTCG
CTTTTGCGGGGCACTGTGCTGTGCCGATTGCACCCGCTTCCGTCTCAGCC
ACAAGCAAAAGCGGGCTTGCATGCTGTGTCACTTGGCCGTTCAGCGGGCG
CGGCGGGAATACGAAGAGAACGGAAGCAGCGGTGGAGTGGGTAATGGCGT
GGACAGAGTGGCACCTTTCTCACCGACTAGTAGCGCCTTCGGGCCGGACT
ACGGCCAGGATATGACGGAGCGCATGCTGACACTGGAGAGCCGGCTCGGG
TCGTTGGAGCGGGCGAGGCGAGTAAAGAAGGCAAGGACACTGCTCAAGTG
TGCTGACTGGGTCATTCGCAGTGCTACGGCATCCATGCTTTTTTCGGGTA
TTTTTGTAGGTCACTACCTTGCTTTGATTGTGCAGATGCGCGGATGGGAT
GTGAGGGTTATGGAGCTTCTGCAGCCGGGGTTGGGGGTGGTCGTGGAGTG
GCTAGAGCCCTCATCCTTTTCGTCGTGGACGGGTCAGTTTTTGGCAGCCC
CATTGGCCTACCTCAAGCAATTGTACGAGCAGCATCCCACCAGCATCGAC
TCCTACTGGTTTGTTTTGCTGTTGACCGTGCTGGCCACCCTTCTGTTGGT
CACGTCCACGCTGTGCCGACGAAGCACTACGGCCTTCAGCGTGGCGGCAG
TGTTGGTGGTGGCGATCGAGCTGACAAAAGTACGGGTGAGAACGCGTCTG
GCCGCAGAATCGGAAGCCGTGTGGGAAGAAGCGAATTATATTTATGGCGC
TTACCTCCGCCTTGCCTTCTTCCGATTGAAAGGCAGCTACATCAAAATGG
CGCAATATATCTCATCCCGGGCTGACATCGTCCCAGATGCCTTCTCCGAC
GAGCTCTCCGCCTTGCAGGACGCTGTACCTCCCTCTCCGCTGGCAGCCAT
CCGGCCCACCATCGAACGTGCTCTTGGTTCTAAATTAGATGAGGCTTTCT
TCAGCTTTGAGTCCGAAGCGTTGGCTTCTGCATCTATCGCTCAAGTGCAT
CGGGCGACTCTCAAGGACGGGACGGAGGTGGTGGTGAAGGTGCAGCATCC
GGACGTGGCCCAGCTTCTGGGCATTGATCTGCGGAATATCGTCGTCATCT
TGACAGTAATTGGTTGGATTGAGCCGGACTATGACTTCAGCATGGTTGCG
CACGAGTGGAGCAAGGAGGTGCAGAAAGAGCTGAATTTTAAAATGGAGGG
AGAAAATCTGCGGATGGCTTACGAGGGAATAGTGCAAAGGTCGGGCTTGG
ATGCGGTGGTACCTCGGGTTTTGCACGCCTCGTCAGATGTGTTGGTCATG
ACATATTGTGATGGCGTCAAGGTTACGGACCCACGCGCTTTCCCCAACCC
GGAGACTGCAGCGGAGGACAAGGCATTGTTCATGAAGATACTGTGTGAGG
TTTTCGCCTATGGCTGCTACATCGAAGGCTTTTTCCAGGGAGACCCTCAT
GCCGGGAATATTCACGTGCAGGCTTATGTAGACGCGGACGGGCATCGACA
CTGTCGGCCTGTTGTGCTGGATTGGGGGCTGGCGAAGAAGCTCTCAGAGC
ATGTGCGGGTGGGTAATGCGAAGATTGTGCTGTCAGTTTGGGAGCTAGAC
ATGGGGGGCATGTTGGATGGTATGGAAGAGGTAGGGATGCCGATTGACTT
AATTAATGTGGTGGAGGACGTAGGAAATATCCGATTTATGATGCGGAACA
CCTCCCCAGGGGCTGAAGCGCGGGAGCAGTCGAAGCAGTTCATGGAAGAC
TTCGTCGAGAAATCCAAGCGCAAGCCCAAGAGCGAGCGGAACCCTCTCAA
GACCATGGTGCCCGAGCTCCTCTTCCTTGCCCGGGTCACAGAGATGCTTC
AAGGGCTAGGTGCCAAGCTCGGCGTCCGCGTCGAATACATGCATATCATG
GCCGCCAGCTGCAAACGCGCCCTGCTCCAGCGGCCTCGGCCCTCCCTGTC
CTCCGACTCCATGTCCTCCCCACCAGCTTTATCTTTTTTGGATCGAAAGG
TGCGGGTTTTGCTGCAGGACCTACTGGCGGAAGGTCACGGGATGGGCGCA
CAGGTGGTGCTATATAAGAATGGGCGGATGCTGGTCAATGCTGCGGAGGG
GCTGCGCAGTCGCTTGGATCCGGGAAGGGTCACACCTGCGACGCTGTTTT
GTGGCTTTAGTTTGACCAAAGCCGTGCTTGCCATTTTAGCTCATGCCCTG
GTTGATGATAATGTGTTAAGCTATGACACATTGCTGGTGGAGGTCTGCCC
GGAGCTGAAGGGGACGGGCAAAGACAATGTGACGTTGCGGCAGATCCTGA
CTCACAGCGCCGGGTTGCAGTATGCTTTTCCTAGCAATGCTACGCCACAA
GCGTTGTGGAAACCTCACACAGGCATTGAGACCATAAAGGAGGCGCGGCC
TTTGGGTGTTAAAGCTGGAGAAGGGAAGCCCAGCATGCGCACGCAAGTGG
CCATGCATTACTACAGCTTTGGTTGGCTGCTGGTACCGGTGCTGGAGAGG
GCTTCGGGCAAATCACTCGCACAACTGGTGCATGAAAAGCTTCTGGTGCC
CTTGGGTCTCCAGCCGGCCAATGATAAGGACCTGAGCGGCATCATTCTGG
GCCCTGTGCCCGGCACGAACGAGCTGGCCTCGTCGGACGATCCACGCTTA
GCGCGTGTTGAGTACGATTTGCGGCAGCTGGTGGCAGAATTGTCGGGAGA
TTCGGATGGGGACATAGGAGCCAATATGGGTGGGGGGCTGATGGATATGG
TGGAGGGCATGATGGACTTTGAAGACGGGGAGGAAGGGGCGGAGGAGGCT
GCAGCGTTCAAGGAGCTTGCGAGGACTAAGTTGGCAGGACGTGAATTTTT
GCTGGATCATCGTATTCTGAATGGCAAACGGTGTCGATCTTCCGGGGCGT
TGCCGTCGTTAAGCGGCCGCTTCACTGCGCGTGCCCTTGCCGACATTCTA
GAATCCTTATGCCGGTTGGAGCGAAGCTCGGGAAATTTTATCCAGCAGCA
ATTCTTGGCCACCACTACCACCTCATCTGTTACATCAGGTTCTGCTGCCT
CTCCCTCGAAGACCACCATCACATTTTCTTTAAAACAAGGCGGGAATGGT
GGTGGAGGCATGGCTTACAACAAGTCTGCGTCCTCTCTGGCTGCCACGCC
TGCTGGTTTGTCCCCTGGCACCTCACCCTTCTCCATCCTCAGCTTGACCC
GTCTCCAGGACATGAAGGCTAACCCCATGGACGATGCACCAGGCCTTACT
CGATTGATGGGGAGGGAGAACACTATCAAATTAGGATGTGGCGTGCAGTT
ATTTGGATTTGAGGCCCCCATGGCAGGCACGTCACAGACGGTGGGTGAAG
GCAGTGCTGCTGGAGAGGCGAGCAATGTCACAACGCGGACCGTCCGATGG
GGAAGTGCGTACGGCCACGCCGGTGCATGTGGGCAGCTGGCATTGTGTGA
CCCGAGCACAGGGGTGGTGCTTGTGGTAACTTCCAACAAGGCGGCGACAC
CCGGGCAGAAAAATGTTGGGTACGAGGTGCTGAGTCTGGTGGCGGAGGAG
CTGAACCTTGGGAAGCCGTTGCCAATCTGGTAG

Synonyms

Publications