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Properties
| Property Name | Value |
| TranscriptId | 138805 |
| Track | FilteredModels2 |
| ProteinId | 138719 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| scaffold_2 | supercontig | scaffold_2:92727..95424 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_649 ID=mRNA_649|Name=jgi.p|Nanoce1779_2|138719|organism=Nannochloropsis oceanica|type=mRNA|length=2467bp ATGAGTTTGCGTGATCATGGGCAGATGAAAAAGGAGCGTGGGAACATCCA AGGCAGCACGTACAATAGAGCGATGAATTAATTGACTGATCGATCGATTT ATTGATTGATTCTTTTTAAAGATATAGATAGACCTTGACCTTGGTTGAGC CTCTTAATATGTCGAAGTACTAACCTCCTGCCTCGCTCGCCTTCATGGAC ATTTCTCATCGAACCCGTCGTACTGTATGCACATGCACAGGCCCGGCACA CGCCTTCAGCCACAGTAGATATATTTAATCCCTTCGCCGTTTCGCGGCCG TTCCTTTTTTTTGCACGCTCCCATGCCCACACAACCATCCTCCACCCACT CTCCCACATCAACACAAATAGCAAGTATGGCTTCCACGGTACCAACCTTT CTGGACCTCCACCATCCACAGCTGGAGTCGCTGGGATTTCCACTCAAACT CTATAGTTCTCTCGAGGCCAAGCTCGTTTCCGAATCCTTTGATGCGGGGA ATACTTTCGAGGTGACCGAGGACGAGGCGAAGGAGCGGTCAGTAGTGTGT TGTGCCGACGAGGGCATCGACGCAGAGGCCGACGTCTGGCTCATTGATCA TCTTTACTCCTTTTGCGTAGAGACATATCGACAGGACTTGAAAGATCGCC CTGAGTTGCTGGCGCGGCTGGCAGCCATGATGGGGTTGGATGAGAAAGAA GAAGAGGAGGAAAAGAAAGGAGAGGAAAAGAAAGTAGCAGCAAAAGATGC GATGACAGAAGAGGGCTGGGAAATGGCGCCGACTTCCATGTCTATACAAG GCGCAAGAATAGCTCTCACAGAGGACGGAACAACCTACGATGAGACTGAG TTGCGGATGTGCCGACCTGACCCGGGAGAAAAAACAACGGTATATGAACA GGTGTGCGAGCAAATCTGGAGATATGCCTCCTCCTACCGCCTGGTCGACC CTCGCGACCCCTTTAAGTTCAAGACCGTGTGGTTTATAAACGATGAATTT GGATCTGCCTTTCGACACGCCTCGCCCACAAGATGCAACATCCGTGTGTC GCCATTCATATATTTGCCTCCAACCGGCGGCCTCCACGGTGCCATGGCCT ATTCCCTGGCCTGGCCTGTGTCACGGATTGAGAAAGGGGAAGCATGTACG CGGGATTATGCTTTTGGATGTGACAAGAAAACAGCAGAGGAGGGGGAAGA CACGTTGCTGCTTAAGCGGGAGTGTCGGTTGGCATTATGGTTCCGGATGC CACCCTCTGTCCTCGCTAAGTGTCAGCTGGCTCACGCCCGGAGGCAGGAT ATACTCGACACGATCACTCATCAAGCTGCGAGTCCTTCCTTCCGCTCCCC CTCCTCGGCCTCCTCCCCTTCGCCTTTGGACACACACTTCAGCCGTACCT TGAAGTATGCCCATTCTGTGATCAAACTCTTCAGCGACAACAATCAAGTC ATCCGCAGCCTCACTCGACCCGAATTCGCTCATGTTAACTCCCCCGCGGA AGCAGACGTCGTGTGGGTGTACCATTCTCCCATGGCTGCAAGCTATCGCC AGGAAAAAGGGTTGGGACCGGAGGTGGTGTTAAGCCAGACCTTGGGAGAT GAATGGTTGGTTTTCAAGCATCTTTTGCCAGTAACAGCTTCGCGTTGTCG GGAGCACAAGGATTGGATTCCCCTCACGTATAACATGGAAACAGAATCCG CTGCATTCATTCACGAGTACATGCAACGCCAACAACAGCAGCGGCATAAT CCCTCCTCCCCTCCGTCCCCTGCTCCCCCTCCCCTGCCTCCGCTGTTCAT CCTAAAGCCGTGGAACCTCGGTCGATCTCTCGACTCAGCCGTCGCTGATT CCCTCCCGCAAGCGCTGCAGCTTTCCCGTACCTGCCCTAAGGTCGCTTCA GAATATATACATGACATCGCCACGGTGAATGGAAAAAAGTTTGACGTGAG ATATCGTGTCATGGTCAGGTCGTGGGAACCCTTGGAAGTGTTTCGGTGGG CGCATTGGGGTTTAAGGGTGTCAAACCACGAGTATTCGCTTAAGGCGGAA GATATTAATGATTTCGAGGCGCATTTTACAGTCATGGACTATGCAGGGTA TACACAAAACCCCGTGAGCGAGGCCGACTTTCTCGAGGCTTTCCAAAGGG ATAATGGGGGAGTACCCTGGTCTGTCGTTGACGTCAAGGTGGATGCTATC GTCAAGGCACTGTTCGAGGCTGCCGCGCCTTTAATTTTGGAGCAGGCAGG GAGAGAGGAAGCACGGCACATGTGCTCGTTTTATGGGGTGGATGTGATGG TGACAAAGGACCTTCAACCTAAGTTACTTGAGTGCACCTTCGGTCCAGAC TGTGCGGCAGCCGTTAGACTGGATCAGGACTTTTACAATAAGGCTTTCGG GATTTTGTTTTTAAACGAGGAGAGGGAGGACTTCCGGAGGTTGTAATGAT TAAAGCATGTAATTTTC back to topprotein sequence of jgi.p|Nanoce1779_2|138719 >mRNA_649-protein ID=mRNA_649-protein|Name=jgi.p|Nanoce1779_2|138719|organism=Nannochloropsis oceanica|type=polypeptide|length=708bp MPTQPSSTHSPTSTQIASMASTVPTFLDLHHPQLESLGFPLKLYSSLEAK LVSESFDAGNTFEVTEDEAKERSVVCCADEGIDAEADVWLIDHLYSFCVE TYRQDLKDRPELLARLAAMMGLDEKEEEEEKKGEEKKVAAKDAMTEEGWE MAPTSMSIQGARIALTEDGTTYDETELRMCRPDPGEKTTVYEQVCEQIWR YASSYRLVDPRDPFKFKTVWFINDEFGSAFRHASPTRCNIRVSPFIYLPP TGGLHGAMAYSLAWPVSRIEKGEACTRDYAFGCDKKTAEEGEDTLLLKRE CRLALWFRMPPSVLAKCQLAHARRQDILDTITHQAASPSFRSPSSASSPS PLDTHFSRTLKYAHSVIKLFSDNNQVIRSLTRPEFAHVNSPAEADVVWVY HSPMAASYRQEKGLGPEVVLSQTLGDEWLVFKHLLPVTASRCREHKDWIP LTYNMETESAAFIHEYMQRQQQQRHNPSSPPSPAPPPLPPLFILKPWNLG RSLDSAVADSLPQALQLSRTCPKVASEYIHDIATVNGKKFDVRYRVMVRS WEPLEVFRWAHWGLRVSNHEYSLKAEDINDFEAHFTVMDYAGYTQNPVSE ADFLEAFQRDNGGVPWSVVDVKVDAIVKALFEAAAPLILEQAGREEARHM CSFYGVDVMVTKDLQPKLLECTFGPDCAAAVRLDQDFYNKAFGILFLNEE REDFRRL* back to topmRNA from alignment at scaffold_2:92727..95424+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_649 ID=mRNA_649|Name=jgi.p|Nanoce1779_2|138719|organism=Nannochloropsis oceanica|type=mRNA|length=2698bp|location=Sequence derived from alignment at scaffold_2:92727..95424+ (Nannochloropsis oceanica) ATGAGTTTGCGTGATCATGGGCAGATGAAAAAGGAGCGTGGGAACATCCA
AGGCAGCACGTACAATAGAGCGATGAATTAATTGACTGATCGATCGATTT
ATTGATTGATTCTTTTTAAAGATATAGATAGACCTTGACCTTGGTTGAGC
CTCTTAATATGTCGAAGTACTAACCTCCTGCCTCGCTCGCCTTCATGGAC
ATTTCTCATCGAACCCGTCGTACTGTATGCACATGCACAGGCCCGGCACA
CGCCTTCAGCCACAGTAGATATATTTAATCCCTTCGCCGTTTCGCGGCCG
TTCCTTTTTTTTGCACGCTCCCATGCCCACACAACCATCCTCCACCCACT
CTCCCACATCAACACAAATAGCAAGTATGGCTTCCACGGTACCAACCTTT
CTGGACCTCCACCATCCACAGCTGGAGTCGCTGGGATTTCCACTCAAACT
CTATAGTTCTCTCGAGGCCAAGCTCGTTTCCGAATCCTTTGATGCGGGGA
ATACTTTCGAGGTGACCGAGGACGAGGCGAAGGAGCGGTCAGTAGTGTGT
TGTGCCGACGAGGGCATCGACGCAGAGGCCGACGTCTGGCTCATTGATCA
TCTTTACTCCTTTTGCGTAGAGACATATCGACAGGACTTGAAAGATCGCC
CTGAGTTGCTGGCGCGGCTGGCAGCCATGATGGGGTTGGATGAGAAAGAA
GAAGAGGAGGAAAAGAAAGGAGAGGAAAAGAAAGTAGCAGCAAAAGATGC
GATGACAGAAGAGGGCTGGGAAATGGCGCCGACTTCCATGTCTATACAAG
GCGCAAGAATAGCTCTCACAGAGGACGGAACAACCTACGATGAGACTGAG
TTGCGGATGTGCCGACCTGACCCGGGAGAAAAAACAACGGTATATGAACA
GGTGTGCGAGCAAATCTGGAGATATGCCTCCTCCTACCGCCTGGTCGACC
CTCGCGACCCCTTTAAGTTCAAGACCGTGTGGTTTATAAACGATGAATTT
GGATCTGCCTTTCGACACGCCTCGCCCACAAGATGCAACATCCGTGTGTC
GCCATTCATATATTTGCCTCCAACCGGCGGCCTCCACGGTGCCATGGCCT
ATTCCCTGGCCTGGCCTGTGTCACGGATTGAGAAAGGGGAAGCATGTACG
CGGGATTATGCTTTTGGATGTGACAAGAAAACAGCAGAGGAGGGGGAAGA
CACGTTGCTGCTTAAGCGGGAGTGTCGGTTGGCATTATGGTTCCGGATGC
CACCCTCTGTCCTCGCTAAGTGTCAGCTGGCTCACGCCCGGAGGCAGGAT
ATACTCGACACGATCACTCATCAAGCTGCGAGTCCTTCCTTCCGCTCCCC
CTCCTCGGCCTCCTCCCCTTCGCCTTTGGACACACACTTCAGCCGTACCT
TGAAGTATGCCCATTCTGTGATCAAACTCTTCAGCGACAACAATCAAGTC
ATCCGCAGCCTCACTCGACCCGAATTCGCTCATGTTAACTCCCCCGCGGA
AGCAGACGTCGTGTGGGTGTACCATTCTCCCATGGCTGCAAGCTATCGCC
AGGAAAAAGGGTTGGGACCGGAGGTGGTGTTAAGCCAGACCTTGGGAGAT
GAATGGTTGGTTTTCAAGCATCTTTTGCCAGTAACAGCTTCGCGTTGTCG
GGAGCACAAGGATTGGATTCCCCTCACGTATAACATGGAAACAGAATCCG
CTGCATTCATTCACGAGTACATGCAACGCCAACAACAGCAGCGGCATAAT
CCCTCCTCCCCTCCGTCCCCTGCTCCCCCTCCCCTGCCTCCGCTGTTCAT
CCTAAAGCCGTGGAACCTCGGTCGATCTCTCGACTCAGCCGTCGCTGATT
CCCTCCCGCAAGCGCTGCAGCTTTCCCGTACCTGCCCTAAGGTCGCTTCA
GAATATATACATGACATCGCCACGGTGAATGGAAAAAAGTTTGACGTGAG
ATATCGTGTCATGGTCAGGTCGTGGGAACCCTTGGAAGTGTTTCGGTGGG
CGCATTGGGGTTTAAGGGTGTCAAACCACGAGTATTCGCTTAAGGCGGAA
GATATTAATGATTTCGAGGTAGTAATCATTCTTTGGAAAGGGGGGGTTGA
AGGAGGAGTTGTGCTGACGGCAGACGAGGATGAAGCATGGGGAAAGAGAG
AAAACATCGTCTTAGAGGATATGTAAGAGGCATTCCCGCCTCAGATTGCG
GTCCATATTGTGTCACAACCCGCTCGTCCTTTCACATCATCCACCACTCT
CCTTTCTTCCCTTCCTCCTTCCCTTTTCTGTCACACTCTCCACAAACAGG
CGCATTTTACAGTCATGGACTATGCAGGGTATACACAAAACCCCGTGAGC
GAGGCCGACTTTCTCGAGGCTTTCCAAAGGGATAATGGGGGAGTACCCTG
GTCTGTCGTTGACGTCAAGGTGGATGCTATCGTCAAGGCACTGTTCGAGG
CTGCCGCGCCTTTAATTTTGGAGCAGGCAGGGAGAGAGGAAGCACGGCAC
ATGTGCTCGTTTTATGGGGTGGATGTGATGGTGACAAAGGACCTTCAACC
TAAGTTACTTGAGTGCACCTTCGGTCCAGACTGTGCGGCAGCCGTTAGAC
TGGATCAGGACTTTTACAATAAGGCTTTCGGGATTTTGTTTTTAAACGAG
GAGAGGGAGGACTTCCGGAGGTTGTAATGATTAAAGCATGTAATTTTC back to topCoding sequence (CDS) from alignment at scaffold_2:92727..95424+ >mRNA_649 ID=mRNA_649|Name=jgi.p|Nanoce1779_2|138719|organism=Nannochloropsis oceanica|type=CDS|length=4248bp|location=Sequence derived from alignment at scaffold_2:92727..95424+ (Nannochloropsis oceanica) ATGCCCACACAACCATCCTCCACCCACTCTCCCACATCAACACAAATAGC AAGTATGGCTTCCACGGTACCAACCTTTCTGGACCTCCACCATCCACAGC TGGAGTCGCTGGGATTTCCACTCAAACTCTATAGTTCTCTCGAGGCCAAG CTCGTTTCCGAATCCTTTGATGCGGGGAATACTTTCGAGGTGACCGAGGA CGAGGCGAAGGAGCGGTCAGTAGTGTGTTGTGCCGACGAGGGCATCGACG CAGAGGCCGACGTCTGGCTCATTGATCATCTTTACTCCTTTTGCGTAGAG ACATATCGACAGGACTTGAAAGATCGCCCTGAGTTGCTGGCGCGGCTGGC AGCCATGATGGGGTTGGATGAGAAAGAAGAAGAGGAGGAAAAGAAAGGAG AGGAAAAGAAAGTAGCAGCAAAAGATGCGATGACAGAAGAGGGCTGGGAA ATGGCGCCGACTTCCATGTCTATACAAGGCGCAAGAATAGCTCTCACAGA GGACGGAACAACCTACGATGAGACTGAGTTGCGGATGTGCCGACCTGACC CGGGAGAAAAAACAACGGTATATGAACAGGTGTGCGAGCAAATCTGGAGA TATGCCTCCTCCTACCGCCTGGTCGACCCTCGCGACCCCTTTAAGTTCAA GACCGTGTGGTTTATAAACGATGAATTTGGATCTGCCTTTCGACACGCCT CGCCCACAAGATGCAACATCCGTGTGTCGCCATTCATATATTTGCCTCCA ACCGGCGGCCTCCACGGTGCCATGGCCTATTCCCTGGCCTGGCCTGTGTC ACGGATTGAGAAAGGGGAAGCATGTACGCGGGATTATGCTTTTGGATGTG ACAAGAAAACAGCAGAGGAGGGGGAAGACACGTTGCTGCTTAAGCGGGAG TGTCGGTTGGCATTATGGTTCCGGATGCCACCCTCTGTCCTCGCTAAGTG TCAGCTGGCTCACGCCCGGAGGCAGGATATACTCGACACGATCACTCATC AAGCTGCGAGTCCTTCCTTCCGCTCCCCCTCCTCGGCCTCCTCCCCTTCG CCTTTGGACACACACTTCAGCCGTACCTTGAAGTATGCCCATTCTGTGAT CAAACTCTTCAGCGACAACAATCAAGTCATCCGCAGCCTCACTCGACCCG AATTCGCTCATGTTAACTCCCCCGCGGAAGCAGACGTCGTGTGGGTGTAC CATTCTCCCATGGCTGCAAGCTATCGCCAGGAAAAAGGGTTGGGACCGGA GGTGGTGTTAAGCCAGACCTTGGGAGATGAATGGTTGGTTTTCAAGCATC TTTTGCCAGTAACAGCTTCGCGTTGTCGGGAGCACAAGGATTGGATTCCC CTCACGTATAACATGGAAACAGAATCCGCTGCATTCATTCACGAGTACAT GCAACGCCAACAACAGCAGCGGCATAATCCCTCCTCCCCTCCGTCCCCTG CTCCCCCTCCCCTGCCTCCGCTGTTCATCCTAAAGCCGTGGAACCTCGGT CGATCTCTCGACTCAGCCGTCGCTGATTCCCTCCCGCAAGCGCTGCAGCT TTCCCGTACCTGCCCTAAGGTCGCTTCAGAATATATACATGACATCGCCA CGGTGAATGGAAAAAAGTTTGACGTGAGATATCGTGTCATGGTCAGGTCG TGGGAACCCTTGGAAGTGTTTCGGTGGGCGCATTGGGGTTTAAGGGTGTC AAACCACGAGTATTCGCTTAAGGCGGAAGATATTAATGATTTCGAGGCGC ATTTTACAGTCATGGACTATGCAGGGTATACACAAAACCCCGTGAGCGAG GCCGACTTTCTCGAGGCTTTCCAAAGGGATAATGGGGGAGTACCCTGGTC TGTCGTTGACGTCAAGGTGGATGCTATCGTCAAGGCACTGTTCGAGGCTG CCGCGCCTTTAATTTTGGAGCAGGCAGGGAGAGAGGAAGCACGGCACATG TGCTCGTTTTATGGGGTGGATGTGATGGTGACAAAGGACCTTCAACCTAA GTTACTTGAGTGCACCTTCGGTCCAGACTGTGCGGCAGCCGTTAGACTGG ATCAGGACTTTTACAATAAGGCTTTCGGGATTTTGTTTTTAAACGAGGAG AGGGAGGACTTCCGGAGGTTGTAAATGCCCACACAACCATCCTCCACCCA CTCTCCCACATCAACACAAATAGCAAGTATGGCTTCCACGGTACCAACCT TTCTGGACCTCCACCATCCACAGCTGGAGTCGCTGGGATTTCCACTCAAA CTCTATAGTTCTCTCGAGGCCAAGCTCGTTTCCGAATCCTTTGATGCGGG GAATACTTTCGAGGTGACCGAGGACGAGGCGAAGGAGCGGTCAGTAGTGT GTTGTGCCGACGAGGGCATCGACGCAGAGGCCGACGTCTGGCTCATTGAT CATCTTTACTCCTTTTGCGTAGAGACATATCGACAGGACTTGAAAGATCG CCCTGAGTTGCTGGCGCGGCTGGCAGCCATGATGGGGTTGGATGAGAAAG AAGAAGAGGAGGAAAAGAAAGGAGAGGAAAAGAAAGTAGCAGCAAAAGAT GCGATGACAGAAGAGGGCTGGGAAATGGCGCCGACTTCCATGTCTATACA AGGCGCAAGAATAGCTCTCACAGAGGACGGAACAACCTACGATGAGACTG AGTTGCGGATGTGCCGACCTGACCCGGGAGAAAAAACAACGGTATATGAA CAGGTGTGCGAGCAAATCTGGAGATATGCCTCCTCCTACCGCCTGGTCGA CCCTCGCGACCCCTTTAAGTTCAAGACCGTGTGGTTTATAAACGATGAAT TTGGATCTGCCTTTCGACACGCCTCGCCCACAAGATGCAACATCCGTGTG TCGCCATTCATATATTTGCCTCCAACCGGCGGCCTCCACGGTGCCATGGC CTATTCCCTGGCCTGGCCTGTGTCACGGATTGAGAAAGGGGAAGCATGTA CGCGGGATTATGCTTTTGGATGTGACAAGAAAACAGCAGAGGAGGGGGAA GACACGTTGCTGCTTAAGCGGGAGTGTCGGTTGGCATTATGGTTCCGGAT GCCACCCTCTGTCCTCGCTAAGTGTCAGCTGGCTCACGCCCGGAGGCAGG ATATACTCGACACGATCACTCATCAAGCTGCGAGTCCTTCCTTCCGCTCC CCCTCCTCGGCCTCCTCCCCTTCGCCTTTGGACACACACTTCAGCCGTAC CTTGAAGTATGCCCATTCTGTGATCAAACTCTTCAGCGACAACAATCAAG TCATCCGCAGCCTCACTCGACCCGAATTCGCTCATGTTAACTCCCCCGCG GAAGCAGACGTCGTGTGGGTGTACCATTCTCCCATGGCTGCAAGCTATCG CCAGGAAAAAGGGTTGGGACCGGAGGTGGTGTTAAGCCAGACCTTGGGAG ATGAATGGTTGGTTTTCAAGCATCTTTTGCCAGTAACAGCTTCGCGTTGT CGGGAGCACAAGGATTGGATTCCCCTCACGTATAACATGGAAACAGAATC CGCTGCATTCATTCACGAGTACATGCAACGCCAACAACAGCAGCGGCATA ATCCCTCCTCCCCTCCGTCCCCTGCTCCCCCTCCCCTGCCTCCGCTGTTC ATCCTAAAGCCGTGGAACCTCGGTCGATCTCTCGACTCAGCCGTCGCTGA TTCCCTCCCGCAAGCGCTGCAGCTTTCCCGTACCTGCCCTAAGGTCGCTT CAGAATATATACATGACATCGCCACGGTGAATGGAAAAAAGTTTGACGTG AGATATCGTGTCATGGTCAGGTCGTGGGAACCCTTGGAAGTGTTTCGGTG GGCGCATTGGGGTTTAAGGGTGTCAAACCACGAGTATTCGCTTAAGGCGG AAGATATTAATGATTTCGAGGCGCATTTTACAGTCATGGACTATGCAGGG TATACACAAAACCCCGTGAGCGAGGCCGACTTTCTCGAGGCTTTCCAAAG GGATAATGGGGGAGTACCCTGGTCTGTCGTTGACGTCAAGGTGGATGCTA TCGTCAAGGCACTGTTCGAGGCTGCCGCGCCTTTAATTTTGGAGCAGGCA GGGAGAGAGGAAGCACGGCACATGTGCTCGTTTTATGGGGTGGATGTGAT GGTGACAAAGGACCTTCAACCTAAGTTACTTGAGTGCACCTTCGGTCCAG ACTGTGCGGCAGCCGTTAGACTGGATCAGGACTTTTACAATAAGGCTTTC GGGATTTTGTTTTTAAACGAGGAGAGGGAGGACTTCCGGAGGTTGTAA back to top
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