jgi.p|Nanoce1779_2|138719, gene_649 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|138719
Unique Namegene_649
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_2:92727..95424 +

Link to JBrowse

Properties
Property NameValue
TranscriptId138805
ProteinId138719
Product nameTubulin-tyrosine ligase family-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_2supercontigscaffold_2:92727..95424 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004835tubulin-tyrosine ligase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL032ncniL032Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G00700NO02G00700Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|138719mRNA_649-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|138719mRNA_649Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|138719

>mRNA_649-protein ID=mRNA_649-protein|Name=jgi.p|Nanoce1779_2|138719|organism=Nannochloropsis oceanica|type=polypeptide|length=708bp
MPTQPSSTHSPTSTQIASMASTVPTFLDLHHPQLESLGFPLKLYSSLEAK
LVSESFDAGNTFEVTEDEAKERSVVCCADEGIDAEADVWLIDHLYSFCVE
TYRQDLKDRPELLARLAAMMGLDEKEEEEEKKGEEKKVAAKDAMTEEGWE
MAPTSMSIQGARIALTEDGTTYDETELRMCRPDPGEKTTVYEQVCEQIWR
YASSYRLVDPRDPFKFKTVWFINDEFGSAFRHASPTRCNIRVSPFIYLPP
TGGLHGAMAYSLAWPVSRIEKGEACTRDYAFGCDKKTAEEGEDTLLLKRE
CRLALWFRMPPSVLAKCQLAHARRQDILDTITHQAASPSFRSPSSASSPS
PLDTHFSRTLKYAHSVIKLFSDNNQVIRSLTRPEFAHVNSPAEADVVWVY
HSPMAASYRQEKGLGPEVVLSQTLGDEWLVFKHLLPVTASRCREHKDWIP
LTYNMETESAAFIHEYMQRQQQQRHNPSSPPSPAPPPLPPLFILKPWNLG
RSLDSAVADSLPQALQLSRTCPKVASEYIHDIATVNGKKFDVRYRVMVRS
WEPLEVFRWAHWGLRVSNHEYSLKAEDINDFEAHFTVMDYAGYTQNPVSE
ADFLEAFQRDNGGVPWSVVDVKVDAIVKALFEAAAPLILEQAGREEARHM
CSFYGVDVMVTKDLQPKLLECTFGPDCAAAVRLDQDFYNKAFGILFLNEE
REDFRRL*
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Synonyms
Publications