jgi.p|Nanoce1779_2|594935, mRNA_6411 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|594935
Unique Name	mRNA_6411
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	4954
Alignment location	scaffold_15:571994..576947 -

Link to JBrowse

Properties


Property Name	Value
TranscriptId	595021
Track	FilteredModels2
ProteinId	594935

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_15	supercontig	scaffold_15:571994..576947 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|594935	gene_6411	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|594935	mRNA_6411-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_6411	CDS_6411	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_15:571994..576947-
coding sequence from alignment at scaffold_15:571994..576947-

mRNA sequence

>mRNA_6411 ID=mRNA_6411|Name=jgi.p|Nanoce1779_2|594935|organism=Nannochloropsis oceanica|type=mRNA|length=4954bp
CTGAAACCTATTCAATTAATTGGCTTGCTTTTCTGAGGGATCGATCGAAT
GATTTATTCTTTCATGAATACCAAATTTATCTTGTTAAGCCCTGTAATGC
ACTGAACTACTCAGTGGATCGTTGTATCCATCGATATGGGGGGAGACGTT
GACGTACGTCATGGCGACTACCTCCCCACATGCATGATGAAACGCACATC
TCCGCTGATATCTTGCAAATTGCCACACAAACGCGTGCCCGCTCTAATAA
TAACACTACAGCACCATGGGATCCTTGAAGGCGCGCAGGCGGCGGCAGCG
GCGGAAAAGGTGCCTTGGTTATGATGCTAATGGGAATGAAAGAGGAGTCC
AGGCGAAAATGGAAAAGCAAACGCTCAAATTCGTCCAAGCGCGGGGGCGG
CGGGTGCCGCCCCGGGTCCTGCAGATCGCGCTGGCGGCACTGTTAATGCT
GCTCTCTAGGCCATCTTACGCTGCCCGACAGTGCGTCCAGATGTTCCTCC
CTTTGTTTGTGTCGTCTCCTCGTTCCGTCCCACTACGAACCCATCCCCTC
GTTGTGCGGAGGGCCATGACGACGCCGAACCCCAAGCAGCGCCGGCCAGC
AGAAGACTGGACAAGAGACCCAACACCACCTCCACCATGGCATCCATCAT
CTATTCCATCTACACGCGTTTTTACCGTGGGACCACCTATGTCCGGGCCG
CGCGAGGCCATTCTCTTGCGACGCCTCAAAGCACTGGACGCAGCCATCGA
GGCCGTGCAGGTTCAAGAATTCTACTTCCTCAGTGTCTTGCACGAGCAGA
AGCAAGAAGACAATTTGATAGAAAACATTTCGAACGTATTGCGTGAAGCT
GCCACCCCTTGGACACATGCGCTTTTGCCCTTGGACGATCAATCCACGGC
CTCTCACCACTCCCTCCGTCAGCACTATCGCGCGTACGCCCCTCGTCCTT
CCTTCCGTAGCGTTTGGAGCAGCAACGTCCGTGCAATTCTAGAAGCACGG
GGCTGTCTAGCTCAAGCTGGCGAGAGTGCAGGCGACAGGCTGCAGGAACT
GGAGATGGGGCGGTGGTACCATATCGTTAGTCGCTCCGAGGCCTTGTTGC
CTGAAGCCGAAGCCCTTCTCTACGACCGCATGACCGAGAGCCCCTTTGCC
ATGCCAGCTGCAGCTGTCTGGGGAGAGGCCGACAAAACATGGATGCTAGC
ACCCACTGACAGGCTGTGGACCGAGAGGGAGAAGGAGCCGAGTGCGATTG
TGCTGCCCTTGCATGAGGAGGGTCCTGAGGTGCTGTATACCGTGAGTGAG
AAGTACGGCCTGGGTTTGGGGGTATGGGAAGTGGCTTTTCTCACAGACTT
GTTCGTGTCGGGCATTGGACGAGATCCAACCGAGGTGGAAATTTTTGACG
TGGCTCAGTCGCTGTCTGAGCATTGCCGGCACTGGACCTTTGACGGGCAG
TTTGTGGTTGACGGACAGGCCATGCCCAAGAGCCTGATGGAAATGGTTCG
GGAACCCTGGCAGCGACAACAGCAGCAGCAACAGCAACAGCAACAGCAAC
AGCAGCAGAATGAAGAGGGCAAAGAAGAAGGAGATAACTCGCTGCTGGCC
TTTTGTGACAATAGCTCGGCCATCAAAGGCCCGCGTGTGCTCGACTTTCA
ACCCGCGACGCCCGACCGGCCATCCCGGTACACCTGTGTCGAGGGTGTGC
GACATCTGAGTCTGACTGCCGAGACACACAATTTTCCTTGCAGCATCGCA
CCATTTCCGGGGGCGCAGACGGGCGTTGGAGGTCGCATTCGAGACATTTT
GGCCACAGGCCGAGGCGGCTATACGCTTGCAGGCCTGGCCGGATATGCGG
TCGGGAGACTTGAGCTTCAGGGCGCAGTGGACAGGAAAAAGGAGGATAAT
CCTCGACCACATCATCGCCCTCGGCACGTGGCCTCAGCCCTGGAAATCCT
GTTGCGTGCGAGCGATGGGGCCTCCGACTATGCAAACAAGTATGGGGAGC
CCTTGGTGGGGGGCTTTGCGCGGGCCATGCCCGCATGGCAGGGCGCTGAA
TTTTTGAAGCCCATCATGTTCTCGGCAGGTGTGGGCAAACTCCCAGCCGA
AGCTGTGCGCAAGAATGAGCCTGACGTAGGAATGGCAGTAGTGAAGCTGG
GGGGACCAGCCTACCGTGTTGGACTGGGTGGAGGTGCTGCATCGAGCAAA
GTGGAGGGGGATCCTGAATTAAACCTGCAGGCTGTACAACGTGGTGATCC
CGAGATGGGCAACAAGGTGGGCCGCGTGGTGCGGGCCTGTCTGGAGATGC
ACCATTCTTCACAGTCACTGCTGTTGGAGAGTGTGCACGACCAGGGGGCG
GGCGGCAATGCCAATGTGCTCAAGGAGCTGGTGGCCCCGGTGGGCGCGGA
CGTGTTCCTAAATCGAATTCAGCGAGGCGACTCCAGCCTGACGCCACTGG
AAGTTTGGGGGGCAGAGTATCAGGAAAGTCAGGGCGTGCTTGTGCAAGGC
TCGCAAGCATTGGCTACCCTGAGCCGGATATGTCACCGCGAGGCCACACC
CATGGAGGTGGTGGGACATATAACGGGCCATGGCGCTATACGGGTGTACG
AGAACGAGGAGGAAGCAGTGCACGGACGGCCGCCCGCACGACCTTTGGTG
GACTTGCCCCTAGAACCCTTGCTCTCACGCCGGCCCAAGCGCGTTATCCA
AGCCATAGGGACGAGGCCAGGAACGAGGGGCGGCATCGAGAAGGCTGCTT
CTCCAATGGCGCTCCGTGATGTATTGCGTGCCATCCTGAGCACAGTGAGT
GTGGGCAGCAAGGCCTTCCTGACCAACAAGGTAGACCGTAGCGTCACGGG
TCTGGTAGCAGCACAACCTTGCGTAGGGCCCTTGCACTTGCCGGTGGGAG
ACGTGGGCGTGACGGCCCTGTCTTTTTGGGGCAAGGAGGGCGTGGCCTCT
GCTCTGGGGGAGTGTCCGGGCATTGGACTGGCGGGCACAAAGACGAGCAT
CGCTGCCATGGTGCGCATGGCCGTGGGGGAGGCACTCACAAATCTGGTCT
CAGCCCCCATCACACGCTGGGCTGACATCAAGCTGCAGGCCAATTGGATG
TGGCCAGGTCGGGAAGGGGAGGCCGCGGGTCAGCTTTACGAGGGCGTGGA
GGCGCTGCGAGAAGCATTACTGGATCTGGGTCTAGCCCTGGACGGAGGCA
AAGATTCCCTGTCCATGGCCACGGATTGCGACGATGGTGTGCGGGTCCCT
TGCCCTGCTACCGTGGTAATCACGGCCTATGCACCTTGTGCTGACGTCTC
AAGAGTTTTGACGCCCGACCTGAAGGTGCCGAGCGCGGTTGAGGGCGAGG
AAGGTGTCCTTATGCTTCTGGAGCTAAGTGGGAAGCCTTCAGGGACCAGG
CGTCTCGGCGGTTCGGCCTGGGCGCAAATTATGGGTAAGGACGCGGAGTT
GGAAACGCCTGACATGCTCGACCCATCCCTTATGAACCGCGCATTTGTGG
CGGTGCAGAGGCTGGCACAAGAGGCCCTGGTCCAAGCATGTCACGACGTG
AGCTCCGGGGGCCTAGTCACCACCGTTTTGGAGATGGCCATGAGCGGAGA
TGCCGGTGCAAGGCTAACGTTGCCACCTCACGTCTTCTCCTTTTCGCCAT
CAGTCTCGGCAGAGGCCGCCCTTTTCGCGGAAGAGCTGAGCTTGGTGTTG
GAGCTCAAGCCGCAGGACGTGAAGAGAGTTCGGGCCGCGCTGGAGAGCCA
GCAGGTGCCGCACCTCATCATTGGGACTTCCACACCGCAGCGTGAAATGG
TAATTGTTGAGGCCAATGGACAGGAGGTTTTGCGGGAGGACATGGACGTC
TTGCGTGCAGAGTGGCAGGCGACCAGCTTCCAGCTCGAGAAGCTTCAAGC
CAATCCAGCGTGCATCGAGGCTGAAGAAGCACTTCTCCCACGCCAGCGAC
GACCCGAGTGGATTTTCCCTCCTCCTCGTGCAACAACTACTCCAGCCCTC
TCCTTCTCTGCTCGACCTAAGCCTCGAGTGGGAGTGTTGCGGGAGCAAGG
CAGCAACGGCGACCGGGAGATGGCGGCGGCTTTGCACAGCGCGGGCTTCG
ACGTCTGGGACCTGACGGTGTATGACCTGCTACAGAACCAGGTGGACCTC
CAATCTTTCCACGGCCTAGCGTTTGTGGGAGGCTTTAGCTACGGCGATGT
CTTGGGCTCAGCGCGAGGCTGGAGAAGCGTGCTCGCAGGAAATCCCCGTG
CGGAAGCTCAGATGCGGCGATTCTTTGCTCGGCCAGAGACCTGGTCTCTA
GGACTCTGCAATGGATGCCAATTACTTGTCGCCCTAGGCATCGTGCCTGG
TCTTGACATGGATGTAGACGGGAAACCGTCTGAGGCTTCCAACCGTGCGG
CGGCATGGTTGGGGGAGAATGAGAGCGGGCGTTTCGAAAGCCGCTTCGTA
ACCGTGCACGTCGGACCTAGTCCCGCCGTGCTACTTAAGGGCTTGGAAGG
AGCGGTGATAGGCATATGGAGTGCACATGGAGAGGGTAATCTGCGCCTTG
AGAACGACGCTGTTCTGGATACTGCTCTTCGCCAGGGTCTTGCGCCAGTG
CGATATGTCGATCCGTGCTGCCACGGTGGGGCATGGGAAGGGACAGAGGA
ATACCCTTTTAACCCTAATGGGTCCCCAAGGGGCGTTGCAGCCCTCTGCT
CCCCGGATGGCCGGCACTTGGCCATGATGCCACATCCAGAGCGCTCTTGG
CTGTGCTGGCAAATGCCTTGGATGCCTCCTGCGGGTGGGCAGGTGGGAGA
AGGCGAGGCGGTTTACACGCCCTGGTTCCGCCTCTTTCAAAATGCCTTTG
ACTTTTCTATGAACAGTATAATGACAGAGAATGCATGATATAAATTTGAC
ACAAATGATCGAAAATCTTTTAAAACAATATAGCAATAAAGTAGACAAAT
GTAA

protein sequence of jgi.p|Nanoce1779_2|594935

>mRNA_6411-protein ID=mRNA_6411-protein|Name=jgi.p|Nanoce1779_2|594935|organism=Nannochloropsis oceanica|type=polypeptide|length=1541bp
MGSLKARRRRQRRKRCLGYDANGNERGVQAKMEKQTLKFVQARGRRVPPR
VLQIALAALLMLLSRPSYAARQCVQMFLPLFVSSPRSVPLRTHPLVVRRA
MTTPNPKQRRPAEDWTRDPTPPPPWHPSSIPSTRVFTVGPPMSGPREAIL
LRRLKALDAAIEAVQVQEFYFLSVLHEQKQEDNLIENISNVLREAATPWT
HALLPLDDQSTASHHSLRQHYRAYAPRPSFRSVWSSNVRAILEARGCLAQ
AGESAGDRLQELEMGRWYHIVSRSEALLPEAEALLYDRMTESPFAMPAAA
VWGEADKTWMLAPTDRLWTEREKEPSAIVLPLHEEGPEVLYTVSEKYGLG
LGVWEVAFLTDLFVSGIGRDPTEVEIFDVAQSLSEHCRHWTFDGQFVVDG
QAMPKSLMEMVREPWQRQQQQQQQQQQQQQQNEEGKEEGDNSLLAFCDNS
SAIKGPRVLDFQPATPDRPSRYTCVEGVRHLSLTAETHNFPCSIAPFPGA
QTGVGGRIRDILATGRGGYTLAGLAGYAVGRLELQGAVDRKKEDNPRPHH
RPRHVASALEILLRASDGASDYANKYGEPLVGGFARAMPAWQGAEFLKPI
MFSAGVGKLPAEAVRKNEPDVGMAVVKLGGPAYRVGLGGGAASSKVEGDP
ELNLQAVQRGDPEMGNKVGRVVRACLEMHHSSQSLLLESVHDQGAGGNAN
VLKELVAPVGADVFLNRIQRGDSSLTPLEVWGAEYQESQGVLVQGSQALA
TLSRICHREATPMEVVGHITGHGAIRVYENEEEAVHGRPPARPLVDLPLE
PLLSRRPKRVIQAIGTRPGTRGGIEKAASPMALRDVLRAILSTVSVGSKA
FLTNKVDRSVTGLVAAQPCVGPLHLPVGDVGVTALSFWGKEGVASALGEC
PGIGLAGTKTSIAAMVRMAVGEALTNLVSAPITRWADIKLQANWMWPGRE
GEAAGQLYEGVEALREALLDLGLALDGGKDSLSMATDCDDGVRVPCPATV
VITAYAPCADVSRVLTPDLKVPSAVEGEEGVLMLLELSGKPSGTRRLGGS
AWAQIMGKDAELETPDMLDPSLMNRAFVAVQRLAQEALVQACHDVSSGGL
VTTVLEMAMSGDAGARLTLPPHVFSFSPSVSAEAALFAEELSLVLELKPQ
DVKRVRAALESQQVPHLIIGTSTPQREMVIVEANGQEVLREDMDVLRAEW
QATSFQLEKLQANPACIEAEEALLPRQRRPEWIFPPPRATTTPALSFSAR
PKPRVGVLREQGSNGDREMAAALHSAGFDVWDLTVYDLLQNQVDLQSFHG
LAFVGGFSYGDVLGSARGWRSVLAGNPRAEAQMRRFFARPETWSLGLCNG
CQLLVALGIVPGLDMDVDGKPSEASNRAAAWLGENESGRFESRFVTVHVG
PSPAVLLKGLEGAVIGIWSAHGEGNLRLENDAVLDTALRQGLAPVRYVDP
CCHGGAWEGTEEYPFNPNGSPRGVAALCSPDGRHLAMMPHPERSWLCWQM
PWMPPAGGQVGEGEAVYTPWFRLFQNAFDFSMNSIMTENA*

mRNA from alignment at scaffold_15:571994..576947-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_6411 ID=mRNA_6411|Name=jgi.p|Nanoce1779_2|594935|organism=Nannochloropsis oceanica|type=mRNA|length=4954bp|location=Sequence derived from alignment at scaffold_15:571994..576947- (Nannochloropsis oceanica)
CTGAAACCTATTCAATTAATTGGCTTGCTTTTCTGAGGGATCGATCGAAT
GATTTATTCTTTCATGAATACCAAATTTATCTTGTTAAGCCCTGTAATGC
ACTGAACTACTCAGTGGATCGTTGTATCCATCGATATGGGGGGAGACGTT
GACGTACGTCATGGCGACTACCTCCCCACATGCATGATGAAACGCACATC
TCCGCTGATATCTTGCAAATTGCCACACAAACGCGTGCCCGCTCTAATAA
TAACACTACAGCACCATGGGATCCTTGAAGGCGCGCAGGCGGCGGCAGCG
GCGGAAAAGGTGCCTTGGTTATGATGCTAATGGGAATGAAAGAGGAGTCC
AGGCGAAAATGGAAAAGCAAACGCTCAAATTCGTCCAAGCGCGGGGGCGG
CGGGTGCCGCCCCGGGTCCTGCAGATCGCGCTGGCGGCACTGTTAATGCT
GCTCTCTAGGCCATCTTACGCTGCCCGACAGTGCGTCCAGATGTTCCTCC
CTTTGTTTGTGTCGTCTCCTCGTTCCGTCCCACTACGAACCCATCCCCTC
GTTGTGCGGAGGGCCATGACGACGCCGAACCCCAAGCAGCGCCGGCCAGC
AGAAGACTGGACAAGAGACCCAACACCACCTCCACCATGGCATCCATCAT
CTATTCCATCTACACGCGTTTTTACCGTGGGACCACCTATGTCCGGGCCG
CGCGAGGCCATTCTCTTGCGACGCCTCAAAGCACTGGACGCAGCCATCGA
GGCCGTGCAGGTTCAAGAATTCTACTTCCTCAGTGTCTTGCACGAGCAGA
AGCAAGAAGACAATTTGATAGAAAACATTTCGAACGTATTGCGTGAAGCT
GCCACCCCTTGGACACATGCGCTTTTGCCCTTGGACGATCAATCCACGGC
CTCTCACCACTCCCTCCGTCAGCACTATCGCGCGTACGCCCCTCGTCCTT
CCTTCCGTAGCGTTTGGAGCAGCAACGTCCGTGCAATTCTAGAAGCACGG
GGCTGTCTAGCTCAAGCTGGCGAGAGTGCAGGCGACAGGCTGCAGGAACT
GGAGATGGGGCGGTGGTACCATATCGTTAGTCGCTCCGAGGCCTTGTTGC
CTGAAGCCGAAGCCCTTCTCTACGACCGCATGACCGAGAGCCCCTTTGCC
ATGCCAGCTGCAGCTGTCTGGGGAGAGGCCGACAAAACATGGATGCTAGC
ACCCACTGACAGGCTGTGGACCGAGAGGGAGAAGGAGCCGAGTGCGATTG
TGCTGCCCTTGCATGAGGAGGGTCCTGAGGTGCTGTATACCGTGAGTGAG
AAGTACGGCCTGGGTTTGGGGGTATGGGAAGTGGCTTTTCTCACAGACTT
GTTCGTGTCGGGCATTGGACGAGATCCAACCGAGGTGGAAATTTTTGACG
TGGCTCAGTCGCTGTCTGAGCATTGCCGGCACTGGACCTTTGACGGGCAG
TTTGTGGTTGACGGACAGGCCATGCCCAAGAGCCTGATGGAAATGGTTCG
GGAACCCTGGCAGCGACAACAGCAGCAGCAACAGCAACAGCAACAGCAAC
AGCAGCAGAATGAAGAGGGCAAAGAAGAAGGAGATAACTCGCTGCTGGCC
TTTTGTGACAATAGCTCGGCCATCAAAGGCCCGCGTGTGCTCGACTTTCA
ACCCGCGACGCCCGACCGGCCATCCCGGTACACCTGTGTCGAGGGTGTGC
GACATCTGAGTCTGACTGCCGAGACACACAATTTTCCTTGCAGCATCGCA
CCATTTCCGGGGGCGCAGACGGGCGTTGGAGGTCGCATTCGAGACATTTT
GGCCACAGGCCGAGGCGGCTATACGCTTGCAGGCCTGGCCGGATATGCGG
TCGGGAGACTTGAGCTTCAGGGCGCAGTGGACAGGAAAAAGGAGGATAAT
CCTCGACCACATCATCGCCCTCGGCACGTGGCCTCAGCCCTGGAAATCCT
GTTGCGTGCGAGCGATGGGGCCTCCGACTATGCAAACAAGTATGGGGAGC
CCTTGGTGGGGGGCTTTGCGCGGGCCATGCCCGCATGGCAGGGCGCTGAA
TTTTTGAAGCCCATCATGTTCTCGGCAGGTGTGGGCAAACTCCCAGCCGA
AGCTGTGCGCAAGAATGAGCCTGACGTAGGAATGGCAGTAGTGAAGCTGG
GGGGACCAGCCTACCGTGTTGGACTGGGTGGAGGTGCTGCATCGAGCAAA
GTGGAGGGGGATCCTGAATTAAACCTGCAGGCTGTACAACGTGGTGATCC
CGAGATGGGCAACAAGGTGGGCCGCGTGGTGCGGGCCTGTCTGGAGATGC
ACCATTCTTCACAGTCACTGCTGTTGGAGAGTGTGCACGACCAGGGGGCG
GGCGGCAATGCCAATGTGCTCAAGGAGCTGGTGGCCCCGGTGGGCGCGGA
CGTGTTCCTAAATCGAATTCAGCGAGGCGACTCCAGCCTGACGCCACTGG
AAGTTTGGGGGGCAGAGTATCAGGAAAGTCAGGGCGTGCTTGTGCAAGGC
TCGCAAGCATTGGCTACCCTGAGCCGGATATGTCACCGCGAGGCCACACC
CATGGAGGTGGTGGGACATATAACGGGCCATGGCGCTATACGGGTGTACG
AGAACGAGGAGGAAGCAGTGCACGGACGGCCGCCCGCACGACCTTTGGTG
GACTTGCCCCTAGAACCCTTGCTCTCACGCCGGCCCAAGCGCGTTATCCA
AGCCATAGGGACGAGGCCAGGAACGAGGGGCGGCATCGAGAAGGCTGCTT
CTCCAATGGCGCTCCGTGATGTATTGCGTGCCATCCTGAGCACAGTGAGT
GTGGGCAGCAAGGCCTTCCTGACCAACAAGGTAGACCGTAGCGTCACGGG
TCTGGTAGCAGCACAACCTTGCGTAGGGCCCTTGCACTTGCCGGTGGGAG
ACGTGGGCGTGACGGCCCTGTCTTTTTGGGGCAAGGAGGGCGTGGCCTCT
GCTCTGGGGGAGTGTCCGGGCATTGGACTGGCGGGCACAAAGACGAGCAT
CGCTGCCATGGTGCGCATGGCCGTGGGGGAGGCACTCACAAATCTGGTCT
CAGCCCCCATCACACGCTGGGCTGACATCAAGCTGCAGGCCAATTGGATG
TGGCCAGGTCGGGAAGGGGAGGCCGCGGGTCAGCTTTACGAGGGCGTGGA
GGCGCTGCGAGAAGCATTACTGGATCTGGGTCTAGCCCTGGACGGAGGCA
AAGATTCCCTGTCCATGGCCACGGATTGCGACGATGGTGTGCGGGTCCCT
TGCCCTGCTACCGTGGTAATCACGGCCTATGCACCTTGTGCTGACGTCTC
AAGAGTTTTGACGCCCGACCTGAAGGTGCCGAGCGCGGTTGAGGGCGAGG
AAGGTGTCCTTATGCTTCTGGAGCTAAGTGGGAAGCCTTCAGGGACCAGG
CGTCTCGGCGGTTCGGCCTGGGCGCAAATTATGGGTAAGGACGCGGAGTT
GGAAACGCCTGACATGCTCGACCCATCCCTTATGAACCGCGCATTTGTGG
CGGTGCAGAGGCTGGCACAAGAGGCCCTGGTCCAAGCATGTCACGACGTG
AGCTCCGGGGGCCTAGTCACCACCGTTTTGGAGATGGCCATGAGCGGAGA
TGCCGGTGCAAGGCTAACGTTGCCACCTCACGTCTTCTCCTTTTCGCCAT
CAGTCTCGGCAGAGGCCGCCCTTTTCGCGGAAGAGCTGAGCTTGGTGTTG
GAGCTCAAGCCGCAGGACGTGAAGAGAGTTCGGGCCGCGCTGGAGAGCCA
GCAGGTGCCGCACCTCATCATTGGGACTTCCACACCGCAGCGTGAAATGG
TAATTGTTGAGGCCAATGGACAGGAGGTTTTGCGGGAGGACATGGACGTC
TTGCGTGCAGAGTGGCAGGCGACCAGCTTCCAGCTCGAGAAGCTTCAAGC
CAATCCAGCGTGCATCGAGGCTGAAGAAGCACTTCTCCCACGCCAGCGAC
GACCCGAGTGGATTTTCCCTCCTCCTCGTGCAACAACTACTCCAGCCCTC
TCCTTCTCTGCTCGACCTAAGCCTCGAGTGGGAGTGTTGCGGGAGCAAGG
CAGCAACGGCGACCGGGAGATGGCGGCGGCTTTGCACAGCGCGGGCTTCG
ACGTCTGGGACCTGACGGTGTATGACCTGCTACAGAACCAGGTGGACCTC
CAATCTTTCCACGGCCTAGCGTTTGTGGGAGGCTTTAGCTACGGCGATGT
CTTGGGCTCAGCGCGAGGCTGGAGAAGCGTGCTCGCAGGAAATCCCCGTG
CGGAAGCTCAGATGCGGCGATTCTTTGCTCGGCCAGAGACCTGGTCTCTA
GGACTCTGCAATGGATGCCAATTACTTGTCGCCCTAGGCATCGTGCCTGG
TCTTGACATGGATGTAGACGGGAAACCGTCTGAGGCTTCCAACCGTGCGG
CGGCATGGTTGGGGGAGAATGAGAGCGGGCGTTTCGAAAGCCGCTTCGTA
ACCGTGCACGTCGGACCTAGTCCCGCCGTGCTACTTAAGGGCTTGGAAGG
AGCGGTGATAGGCATATGGAGTGCACATGGAGAGGGTAATCTGCGCCTTG
AGAACGACGCTGTTCTGGATACTGCTCTTCGCCAGGGTCTTGCGCCAGTG
CGATATGTCGATCCGTGCTGCCACGGTGGGGCATGGGAAGGGACAGAGGA
ATACCCTTTTAACCCTAATGGGTCCCCAAGGGGCGTTGCAGCCCTCTGCT
CCCCGGATGGCCGGCACTTGGCCATGATGCCACATCCAGAGCGCTCTTGG
CTGTGCTGGCAAATGCCTTGGATGCCTCCTGCGGGTGGGCAGGTGGGAGA
AGGCGAGGCGGTTTACACGCCCTGGTTCCGCCTCTTTCAAAATGCCTTTG
ACTTTTCTATGAACAGTATAATGACAGAGAATGCATGATATAAATTTGAC
ACAAATGATCGAAAATCTTTTAAAACAATATAGCAATAAAGTAGACAAAT
GTAA

Coding sequence (CDS) from alignment at scaffold_15:571994..576947-

>mRNA_6411 ID=mRNA_6411|Name=jgi.p|Nanoce1779_2|594935|organism=Nannochloropsis oceanica|type=CDS|length=4623bp|location=Sequence derived from alignment at scaffold_15:571994..576947- (Nannochloropsis oceanica)
ATGGGATCCTTGAAGGCGCGCAGGCGGCGGCAGCGGCGGAAAAGGTGCCT
TGGTTATGATGCTAATGGGAATGAAAGAGGAGTCCAGGCGAAAATGGAAA
AGCAAACGCTCAAATTCGTCCAAGCGCGGGGGCGGCGGGTGCCGCCCCGG
GTCCTGCAGATCGCGCTGGCGGCACTGTTAATGCTGCTCTCTAGGCCATC
TTACGCTGCCCGACAGTGCGTCCAGATGTTCCTCCCTTTGTTTGTGTCGT
CTCCTCGTTCCGTCCCACTACGAACCCATCCCCTCGTTGTGCGGAGGGCC
ATGACGACGCCGAACCCCAAGCAGCGCCGGCCAGCAGAAGACTGGACAAG
AGACCCAACACCACCTCCACCATGGCATCCATCATCTATTCCATCTACAC
GCGTTTTTACCGTGGGACCACCTATGTCCGGGCCGCGCGAGGCCATTCTC
TTGCGACGCCTCAAAGCACTGGACGCAGCCATCGAGGCCGTGCAGGTTCA
AGAATTCTACTTCCTCAGTGTCTTGCACGAGCAGAAGCAAGAAGACAATT
TGATAGAAAACATTTCGAACGTATTGCGTGAAGCTGCCACCCCTTGGACA
CATGCGCTTTTGCCCTTGGACGATCAATCCACGGCCTCTCACCACTCCCT
CCGTCAGCACTATCGCGCGTACGCCCCTCGTCCTTCCTTCCGTAGCGTTT
GGAGCAGCAACGTCCGTGCAATTCTAGAAGCACGGGGCTGTCTAGCTCAA
GCTGGCGAGAGTGCAGGCGACAGGCTGCAGGAACTGGAGATGGGGCGGTG
GTACCATATCGTTAGTCGCTCCGAGGCCTTGTTGCCTGAAGCCGAAGCCC
TTCTCTACGACCGCATGACCGAGAGCCCCTTTGCCATGCCAGCTGCAGCT
GTCTGGGGAGAGGCCGACAAAACATGGATGCTAGCACCCACTGACAGGCT
GTGGACCGAGAGGGAGAAGGAGCCGAGTGCGATTGTGCTGCCCTTGCATG
AGGAGGGTCCTGAGGTGCTGTATACCGTGAGTGAGAAGTACGGCCTGGGT
TTGGGGGTATGGGAAGTGGCTTTTCTCACAGACTTGTTCGTGTCGGGCAT
TGGACGAGATCCAACCGAGGTGGAAATTTTTGACGTGGCTCAGTCGCTGT
CTGAGCATTGCCGGCACTGGACCTTTGACGGGCAGTTTGTGGTTGACGGA
CAGGCCATGCCCAAGAGCCTGATGGAAATGGTTCGGGAACCCTGGCAGCG
ACAACAGCAGCAGCAACAGCAACAGCAACAGCAACAGCAGCAGAATGAAG
AGGGCAAAGAAGAAGGAGATAACTCGCTGCTGGCCTTTTGTGACAATAGC
TCGGCCATCAAAGGCCCGCGTGTGCTCGACTTTCAACCCGCGACGCCCGA
CCGGCCATCCCGGTACACCTGTGTCGAGGGTGTGCGACATCTGAGTCTGA
CTGCCGAGACACACAATTTTCCTTGCAGCATCGCACCATTTCCGGGGGCG
CAGACGGGCGTTGGAGGTCGCATTCGAGACATTTTGGCCACAGGCCGAGG
CGGCTATACGCTTGCAGGCCTGGCCGGATATGCGGTCGGGAGACTTGAGC
TTCAGGGCGCAGTGGACAGGAAAAAGGAGGATAATCCTCGACCACATCAT
CGCCCTCGGCACGTGGCCTCAGCCCTGGAAATCCTGTTGCGTGCGAGCGA
TGGGGCCTCCGACTATGCAAACAAGTATGGGGAGCCCTTGGTGGGGGGCT
TTGCGCGGGCCATGCCCGCATGGCAGGGCGCTGAATTTTTGAAGCCCATC
ATGTTCTCGGCAGGTGTGGGCAAACTCCCAGCCGAAGCTGTGCGCAAGAA
TGAGCCTGACGTAGGAATGGCAGTAGTGAAGCTGGGGGGACCAGCCTACC
GTGTTGGACTGGGTGGAGGTGCTGCATCGAGCAAAGTGGAGGGGGATCCT
GAATTAAACCTGCAGGCTGTACAACGTGGTGATCCCGAGATGGGCAACAA
GGTGGGCCGCGTGGTGCGGGCCTGTCTGGAGATGCACCATTCTTCACAGT
CACTGCTGTTGGAGAGTGTGCACGACCAGGGGGCGGGCGGCAATGCCAAT
GTGCTCAAGGAGCTGGTGGCCCCGGTGGGCGCGGACGTGTTCCTAAATCG
AATTCAGCGAGGCGACTCCAGCCTGACGCCACTGGAAGTTTGGGGGGCAG
AGTATCAGGAAAGTCAGGGCGTGCTTGTGCAAGGCTCGCAAGCATTGGCT
ACCCTGAGCCGGATATGTCACCGCGAGGCCACACCCATGGAGGTGGTGGG
ACATATAACGGGCCATGGCGCTATACGGGTGTACGAGAACGAGGAGGAAG
CAGTGCACGGACGGCCGCCCGCACGACCTTTGGTGGACTTGCCCCTAGAA
CCCTTGCTCTCACGCCGGCCCAAGCGCGTTATCCAAGCCATAGGGACGAG
GCCAGGAACGAGGGGCGGCATCGAGAAGGCTGCTTCTCCAATGGCGCTCC
GTGATGTATTGCGTGCCATCCTGAGCACAGTGAGTGTGGGCAGCAAGGCC
TTCCTGACCAACAAGGTAGACCGTAGCGTCACGGGTCTGGTAGCAGCACA
ACCTTGCGTAGGGCCCTTGCACTTGCCGGTGGGAGACGTGGGCGTGACGG
CCCTGTCTTTTTGGGGCAAGGAGGGCGTGGCCTCTGCTCTGGGGGAGTGT
CCGGGCATTGGACTGGCGGGCACAAAGACGAGCATCGCTGCCATGGTGCG
CATGGCCGTGGGGGAGGCACTCACAAATCTGGTCTCAGCCCCCATCACAC
GCTGGGCTGACATCAAGCTGCAGGCCAATTGGATGTGGCCAGGTCGGGAA
GGGGAGGCCGCGGGTCAGCTTTACGAGGGCGTGGAGGCGCTGCGAGAAGC
ATTACTGGATCTGGGTCTAGCCCTGGACGGAGGCAAAGATTCCCTGTCCA
TGGCCACGGATTGCGACGATGGTGTGCGGGTCCCTTGCCCTGCTACCGTG
GTAATCACGGCCTATGCACCTTGTGCTGACGTCTCAAGAGTTTTGACGCC
CGACCTGAAGGTGCCGAGCGCGGTTGAGGGCGAGGAAGGTGTCCTTATGC
TTCTGGAGCTAAGTGGGAAGCCTTCAGGGACCAGGCGTCTCGGCGGTTCG
GCCTGGGCGCAAATTATGGGTAAGGACGCGGAGTTGGAAACGCCTGACAT
GCTCGACCCATCCCTTATGAACCGCGCATTTGTGGCGGTGCAGAGGCTGG
CACAAGAGGCCCTGGTCCAAGCATGTCACGACGTGAGCTCCGGGGGCCTA
GTCACCACCGTTTTGGAGATGGCCATGAGCGGAGATGCCGGTGCAAGGCT
AACGTTGCCACCTCACGTCTTCTCCTTTTCGCCATCAGTCTCGGCAGAGG
CCGCCCTTTTCGCGGAAGAGCTGAGCTTGGTGTTGGAGCTCAAGCCGCAG
GACGTGAAGAGAGTTCGGGCCGCGCTGGAGAGCCAGCAGGTGCCGCACCT
CATCATTGGGACTTCCACACCGCAGCGTGAAATGGTAATTGTTGAGGCCA
ATGGACAGGAGGTTTTGCGGGAGGACATGGACGTCTTGCGTGCAGAGTGG
CAGGCGACCAGCTTCCAGCTCGAGAAGCTTCAAGCCAATCCAGCGTGCAT
CGAGGCTGAAGAAGCACTTCTCCCACGCCAGCGACGACCCGAGTGGATTT
TCCCTCCTCCTCGTGCAACAACTACTCCAGCCCTCTCCTTCTCTGCTCGA
CCTAAGCCTCGAGTGGGAGTGTTGCGGGAGCAAGGCAGCAACGGCGACCG
GGAGATGGCGGCGGCTTTGCACAGCGCGGGCTTCGACGTCTGGGACCTGA
CGGTGTATGACCTGCTACAGAACCAGGTGGACCTCCAATCTTTCCACGGC
CTAGCGTTTGTGGGAGGCTTTAGCTACGGCGATGTCTTGGGCTCAGCGCG
AGGCTGGAGAAGCGTGCTCGCAGGAAATCCCCGTGCGGAAGCTCAGATGC
GGCGATTCTTTGCTCGGCCAGAGACCTGGTCTCTAGGACTCTGCAATGGA
TGCCAATTACTTGTCGCCCTAGGCATCGTGCCTGGTCTTGACATGGATGT
AGACGGGAAACCGTCTGAGGCTTCCAACCGTGCGGCGGCATGGTTGGGGG
AGAATGAGAGCGGGCGTTTCGAAAGCCGCTTCGTAACCGTGCACGTCGGA
CCTAGTCCCGCCGTGCTACTTAAGGGCTTGGAAGGAGCGGTGATAGGCAT
ATGGAGTGCACATGGAGAGGGTAATCTGCGCCTTGAGAACGACGCTGTTC
TGGATACTGCTCTTCGCCAGGGTCTTGCGCCAGTGCGATATGTCGATCCG
TGCTGCCACGGTGGGGCATGGGAAGGGACAGAGGAATACCCTTTTAACCC
TAATGGGTCCCCAAGGGGCGTTGCAGCCCTCTGCTCCCCGGATGGCCGGC
ACTTGGCCATGATGCCACATCCAGAGCGCTCTTGGCTGTGCTGGCAAATG
CCTTGGATGCCTCCTGCGGGTGGGCAGGTGGGAGAAGGCGAGGCGGTTTA
CACGCCCTGGTTCCGCCTCTTTCAAAATGCCTTTGACTTTTCTATGAACA
GTATAATGACAGAGAATGCATGA

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