jgi.p|Nanoce1779_2|594935, gene_6411 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|594935
Unique Namegene_6411
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_15:571994..576947 -

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Properties
Property NameValue
TranscriptId595021
ProteinId594935
Product nameCobB/CobQ-like glutamine amidotransferase domain-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_15supercontigscaffold_15:571994..576947 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004642phosphoribosylformylglycinamidine synthase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006189'de novo' IMP biosynthetic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL020ncniL020Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO20G01910NO20G01910Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|594935mRNA_6411-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|594935mRNA_6411Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|594935

>mRNA_6411-protein ID=mRNA_6411-protein|Name=jgi.p|Nanoce1779_2|594935|organism=Nannochloropsis oceanica|type=polypeptide|length=1541bp
MGSLKARRRRQRRKRCLGYDANGNERGVQAKMEKQTLKFVQARGRRVPPR
VLQIALAALLMLLSRPSYAARQCVQMFLPLFVSSPRSVPLRTHPLVVRRA
MTTPNPKQRRPAEDWTRDPTPPPPWHPSSIPSTRVFTVGPPMSGPREAIL
LRRLKALDAAIEAVQVQEFYFLSVLHEQKQEDNLIENISNVLREAATPWT
HALLPLDDQSTASHHSLRQHYRAYAPRPSFRSVWSSNVRAILEARGCLAQ
AGESAGDRLQELEMGRWYHIVSRSEALLPEAEALLYDRMTESPFAMPAAA
VWGEADKTWMLAPTDRLWTEREKEPSAIVLPLHEEGPEVLYTVSEKYGLG
LGVWEVAFLTDLFVSGIGRDPTEVEIFDVAQSLSEHCRHWTFDGQFVVDG
QAMPKSLMEMVREPWQRQQQQQQQQQQQQQQNEEGKEEGDNSLLAFCDNS
SAIKGPRVLDFQPATPDRPSRYTCVEGVRHLSLTAETHNFPCSIAPFPGA
QTGVGGRIRDILATGRGGYTLAGLAGYAVGRLELQGAVDRKKEDNPRPHH
RPRHVASALEILLRASDGASDYANKYGEPLVGGFARAMPAWQGAEFLKPI
MFSAGVGKLPAEAVRKNEPDVGMAVVKLGGPAYRVGLGGGAASSKVEGDP
ELNLQAVQRGDPEMGNKVGRVVRACLEMHHSSQSLLLESVHDQGAGGNAN
VLKELVAPVGADVFLNRIQRGDSSLTPLEVWGAEYQESQGVLVQGSQALA
TLSRICHREATPMEVVGHITGHGAIRVYENEEEAVHGRPPARPLVDLPLE
PLLSRRPKRVIQAIGTRPGTRGGIEKAASPMALRDVLRAILSTVSVGSKA
FLTNKVDRSVTGLVAAQPCVGPLHLPVGDVGVTALSFWGKEGVASALGEC
PGIGLAGTKTSIAAMVRMAVGEALTNLVSAPITRWADIKLQANWMWPGRE
GEAAGQLYEGVEALREALLDLGLALDGGKDSLSMATDCDDGVRVPCPATV
VITAYAPCADVSRVLTPDLKVPSAVEGEEGVLMLLELSGKPSGTRRLGGS
AWAQIMGKDAELETPDMLDPSLMNRAFVAVQRLAQEALVQACHDVSSGGL
VTTVLEMAMSGDAGARLTLPPHVFSFSPSVSAEAALFAEELSLVLELKPQ
DVKRVRAALESQQVPHLIIGTSTPQREMVIVEANGQEVLREDMDVLRAEW
QATSFQLEKLQANPACIEAEEALLPRQRRPEWIFPPPRATTTPALSFSAR
PKPRVGVLREQGSNGDREMAAALHSAGFDVWDLTVYDLLQNQVDLQSFHG
LAFVGGFSYGDVLGSARGWRSVLAGNPRAEAQMRRFFARPETWSLGLCNG
CQLLVALGIVPGLDMDVDGKPSEASNRAAAWLGENESGRFESRFVTVHVG
PSPAVLLKGLEGAVIGIWSAHGEGNLRLENDAVLDTALRQGLAPVRYVDP
CCHGGAWEGTEEYPFNPNGSPRGVAALCSPDGRHLAMMPHPERSWLCWQM
PWMPPAGGQVGEGEAVYTPWFRLFQNAFDFSMNSIMTENA*
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Synonyms
Publications