jgi.p|Nanoce1779_2|593606, mRNA_6053 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|593606
Unique Name	mRNA_6053
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	4839
Alignment location	scaffold_14:415680..420518 -

Link to JBrowse

Properties


Property Name	Value
TranscriptId	593692
Track	FilteredModels2
ProteinId	593606

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_14	supercontig	scaffold_14:415680..420518 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|593606	gene_6053	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|593606	mRNA_6053-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_6053	CDS_6053	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_14:415680..420518-
coding sequence from alignment at scaffold_14:415680..420518-

mRNA sequence

>mRNA_6053 ID=mRNA_6053|Name=jgi.p|Nanoce1779_2|593606|organism=Nannochloropsis oceanica|type=mRNA|length=4839bp
AGCAACAGCAGCAGCAGCAGCAGCTATGTCTTGACAATGGGAAACACCAC
TCTACTTTCAGCCAAGGCGGGTATCCCAGCTCCTCCTCCTGCTGCCTCGT
CCTCCCTTGTGTCCTTTAAGTTCCGACGGCCCCCATTAGCTGTCACTACC
ACTCGGGTCACCAACGTGGCGGCATCGACAGCGGTGGGTGCTATTCCACC
TGCTCCCACCAGCAACGTCGTCCTAGGAAGTAAACGATGGACCGAAGAAG
CAGAGGCGGCTGACGGTATCCGCACCTCCACCACCGTAAGGAGCAGCAGC
AACAACAATAGCAATAGCAACAGCATTAGCAACAACCACAGCAGCAATAA
CCGTAGCAGTAGCAGCAACACCAGCATTACCAGTAAGAATGGAAGAATGC
TTCCGACTGCTGATGTGAAAGCTCTTACCTCCTTGGGCGCCAAGACCAAT
CGAGGTTTCCTGTCACGCGGCGCGGCGTGGAGGGATCGTGTAGCAAGTCT
GACGGAGGCGGAGATGGAGGAAGGGAAGGAAAAGCATTTGGGAAGTATGC
GTCTTTCTTTGCTTGAGGTGAAGAGCGAGGGAGAGGAGGAAGAGGAAAAA
GAAGAGGAGGAGGAGAAGATTAGGTTCGCCAAGGCAGCAGAGGCGATGGA
GATCCATGAGGATGAGGAAGATGAGGGCGTGAACGAGGATGATGCTTTTA
GAATCATGTCTGATTTAGATGAGGCTGGATCTAAGGCTTCAGTAGGAAAT
GAAGTCGACCACAACAACAAAATGATTGTCAAGGCTACTTGCAGCAGCAA
AACGACAGCAGTAACAGCAGCAGCAGCAGCAAGTATTCTTCCACCATCCA
CCACGATGACAAAGAAGCCAGCTGTGGCAGCAGCCTCAGTAGCTGTAGCG
CTTAAGAAAGATTCAATCACAGTAGTGCCAGTCGAAGTGACAGTAGCCCT
TCCCCTCCCCAAACCAAAGCCTAGGCAAAAAAAACTCAAACCAGGCGAGG
TGAGCGACAATTTTATCGCCCTTAACCTCAAGCGAAAAGGGACGGCCAAA
AACCGCAAGGTCAAATCTGTGAAGTCCCTCGCTCGTCGACAGGCATGGAT
CGAACAACGCCAGGAGTGTGATTCTAACAAGGGCAGCGGAACAAATGGTG
GGAAGCGCGGGGGGAACCGAATGTCTCGCCCCGGGCGAGCGGTGGATCCA
CTTGATGTGTGTTTGGACGTCCTAGAAGGTTTTTTGAAGGTCGGGGAAAA
GGACGAAGTGAAGGAAAGTATGATGGCACGGGCGTTGGAAGAAGTGTCGC
AGCTTCGTAGCAAAGACATAAGGGAGGTGCGTGATCCGGTTTTGAAGGCC
TTGGCACCTAAGTGTGCGCATCATCATCAACCGTCTCGCTTGTTGAGAGT
GAAGAAGTCAGGACCGAACAAGGGGAGGAGGTTTTACACGTGCAGTTTTC
CGAGGGGGGAGGAGTGTGGGTTCTTCATGTGGGTGGAGGATAACCCTGTC
TTAGTCGCTGCGGAGATTGGGCCTCCTTCTGTTATGTCTTTGCCTTCTCT
TGGGAAAGAGGAAGACGCAGAGTGGACGGAGCGGCAGATGGAAGGGTGGA
AGGCCAGGTTTAACAAGATGACAATTCCGGAGTTGAAGGACCAGGCGAAG
CGACGGGGACTGGCGCTGAGTGGGACGAAGAAGGTACTCGTAGCTCGATT
GATGGACGGGTTGGAAGAGGCGGTGGTCGCACCGGGAGCTACTGAGATAA
AGAAGGAACAGGAAGAAGAGGAGGAGAAGGAGAAGGAGGATGTGGAGGAG
GGAAGCGAAGAGGGCGACGACGAGGCCTCGGAATGTAATTCGGATGATGA
GGATTATGAGCTTGACATCATTGAGGCGGCCCTGGAGGGGCGTCCGGAGG
AGGTGGAAGAAGACAGTGGTGACGACGAGGGTCAGAAGGACGAAGGTGAG
GAGGACGAGGAGGACGAAGACGAGGCCGAGGACGAGGATGGAATTGCCGG
TGAAGCTGTCGCTGCCGTTCAGCCTGAAAGGAAGCGTCGTATCCAGTCGG
ACAACTCCTCGAACGAAGTTGAAGAAAAGGAAGCCATGGACGAAGGGGAG
ACGGGTACCAGCGACAGCGACAGCGATGATGAGGAGGAGAAAGCGCCTGC
TAAGAAGAAGAGCCGCAAGGCGCCATCAAAAGCAAAATCACCACCGACCA
AATCAAAACCCGGCAGCAAGCTAGAGAAGGCTGATTCTTATCCACCTGTC
ATGCGTGGACTTGCACCCCTTCCCGCGCCTGTTTTAGGGTCAGGAGAGAT
GTTCACAGAGGAGATGGCACGCGAGACACTGCAAGGCATATTTGGTTATC
AGGATTTCAGACCTGGACAGTTCTGGGCAATCCAACGGGCGTTGGCAGGG
GAAAATTCCTTGCTCATGCTCCCGACGGGCGCAGGGAAGAGTCTGTGTTA
TCAAATGGCAGCTGCGTGTGCACCTGTGGGATCGCTGGTTATGGTGGTCT
CGCCACTCATCTCTTTGATGATCGACCAGTTGGCACGTCTCCCTCCCCAG
GTGCCTGGGGCTTGTTTAGCGGGAAATTTGAGCATGCGGGAGCTAGCGAG
AATAATTCGGGATTTACGAAGTGGCCGGTTGAGAGTTTTATTTGTCTCGC
CCGAAAAACTCTGTAGCCCCTCGTTTGGACGACTGGTAGGGGAGGATGTG
GCGGGGAGAGGGGGCGCTGCGTTTCCGCCCGTATCCCTGGTGTGCATTGA
CGAAGCACACTGTATCTCCCAATGGTCCCACAATTTCCGCCCAGCCTTCC
TACGCCTAGGCCGCAACATCGAGAACTTGCTCAAGCCCCGCGCACTCCTT
GCAATGACTGCCACTGCCGACGCAGACGTTATTGGTGATATTTGCGCACG
GCTCCGCATCTCCCCGACAGAAGGAGTGCTCTTGCAGCCTTGGCGTCGTC
ACAACCTTCGTTTGCGTGTAGAGCTCCTGGACGGAGACGCTCAGCTTAAG
CGCCAACGTATCCTGGATCTGCTCTCCCGCCCACCCTACGATCGTGGCTC
AGTCATTGTTTACGTTCGGCAGCAGCGGGACGCCGATGTGTTAAAAGAAT
TTCTCGTTTCGCAAGGGCAGCCAGCCATTGCTTACCATGCTGGTATGGAT
CTGAAGCATCGGGCTTCGGCTCAAAGTGCGTGGATGCGACGGCGGGGCAC
AAGAGTGAGCGGGCATGCGCGCGTGTGTGTCGCGACGATTGCTTTTGGAT
TAGGGGTGGATAAGGGGGATGTGCGAGCAGTGTTACACTACGAAATGCCC
AAGAGTATTGAGAATCTGGTGCAGGAGACGGGCCGCGCTGGTCGGGACGG
GAAAGAAGCATGGTGTCCAACGTTGCTTTCTCAGGATGATTTTTGGCGGC
AGCATAGCCTGGCTCACTCGGATGGGGTTACGGCGTTGCAGCTGCGGGGG
CTTTTGGGGATGCTGTCCTCGCTGGCTGCAGCAGCGAAGGCCACGCCAAA
GGCTCAGAATCGTGGTGGTGGAAAAGAGGGAGGGAAGGAAGAATGGGACA
AAGAGGGGGTGCAGGTGGCTGTGGATATCAAGAATACCTCAATTGCGCTG
GATATTCGGGAGGAAGTGCTCGAGACTGCTTTGGTTCTGATGGAGCTCCC
GCCTTTCTCCATGCTCACCCTCCACGGGACGGTGCAAGATGAATTCCAGG
TCGTTTTCCGCAAGCGGCAGGCGAGTATGCTCCGCAAGAGCGAGGCCGTG
ATCGACACATTGCTGGACGTGGGAACGCCCTCCGCGGATCTATTCGAGCG
GACAAGTGATACATTTGGGGCCAGCTACGGGTATGGCTCAGCAGCCTGCT
CCCTGGTCCGCCTTGCCAGTGCCATGGGGCCCGATTGGAAACCACACGAT
GTCGTGAAGGAGCTAGCGAGGCTACAGGCTATGGGTGAGCTACAATTTAC
GGCCGCTGCCAAGCCTCATTTCCATTTGACCCTCCTGCCTCCCCCTTCGT
CAACCACATCCACATCCACTGAGGATGAAGCAGCTGCAGAAGCTGCAGCA
GTAAGCAGCACACCCCTGTCCCTACATCGAATTGGAGAGGTAGTTGCAGC
CTTGGCTGAACGCATGACAGCAATTGAAGTGGCCAGCGTTCAAAAAGTCG
AGCAAGTCTACAGCGTGCTCCGGGCGGCCGCGGGGGCCCCTGACGAGGAA
GGCCAGGAGGCACAAACCCTCGAGCTGATTGATGCCTACTTCGCCAAGAA
AGACTTACCTTTACCCTTAAACCTTCCCATGTCGTTTGCGCCCGCCATCC
CATCTCAGGTACAAGTGGTGATGCGGAGAGACGCCAATATCCTGCTGTTG
GATCCCCGCCTCGTCCTGCTGTTGCAGCAGGTGGTGGGCCGCAGTCGTCG
TCGAGGCGCACCAACAAATGTGAATTTGGAGATGGAGCTAAGGTTGTACA
AGGCTAGATTGGTGACGAGGGTTTTTCATGGGATTGGCAGCCCGAGGGTG
CCGTTGATGGAGTGGAGGGAAAGTCCTTTTTGGGGGAAGCATCGTCAGTA
CAAATTCGAGGATGTGGAAAGTACCCTGAGCGTTGGGGAGGGGTAGTAAT
GGGGAGGTCCCCAACGATGATATGGGGTCACGCGGCCGTTTATGAATGAA
ACGGTAAAGGAGGTGAAATATGGGGGCAATAGATTTGCGATGTGGATGTT
GTGTGGAGGTAGTGTGCACGTGCAAGGCACAAAGCATAATTGCAAAAGTA
AAGCATAGATGAATGTGATAATGTTTATTATCAGATGTCGCAAGAAGAAA
TCAGCAACGAAAGCTAATGAGATGACGAAAATAGTCTTA

protein sequence of jgi.p|Nanoce1779_2|593606

>mRNA_6053-protein ID=mRNA_6053-protein|Name=jgi.p|Nanoce1779_2|593606|organism=Nannochloropsis oceanica|type=polypeptide|length=1520bp
MGNTTLLSAKAGIPAPPPAASSSLVSFKFRRPPLAVTTTRVTNVAASTAV
GAIPPAPTSNVVLGSKRWTEEAEAADGIRTSTTVRSSSNNNSNSNSISNN
HSSNNRSSSSNTSITSKNGRMLPTADVKALTSLGAKTNRGFLSRGAAWRD
RVASLTEAEMEEGKEKHLGSMRLSLLEVKSEGEEEEEKEEEEEKIRFAKA
AEAMEIHEDEEDEGVNEDDAFRIMSDLDEAGSKASVGNEVDHNNKMIVKA
TCSSKTTAVTAAAAASILPPSTTMTKKPAVAAASVAVALKKDSITVVPVE
VTVALPLPKPKPRQKKLKPGEVSDNFIALNLKRKGTAKNRKVKSVKSLAR
RQAWIEQRQECDSNKGSGTNGGKRGGNRMSRPGRAVDPLDVCLDVLEGFL
KVGEKDEVKESMMARALEEVSQLRSKDIREVRDPVLKALAPKCAHHHQPS
RLLRVKKSGPNKGRRFYTCSFPRGEECGFFMWVEDNPVLVAAEIGPPSVM
SLPSLGKEEDAEWTERQMEGWKARFNKMTIPELKDQAKRRGLALSGTKKV
LVARLMDGLEEAVVAPGATEIKKEQEEEEEKEKEDVEEGSEEGDDEASEC
NSDDEDYELDIIEAALEGRPEEVEEDSGDDEGQKDEGEEDEEDEDEAEDE
DGIAGEAVAAVQPERKRRIQSDNSSNEVEEKEAMDEGETGTSDSDSDDEE
EKAPAKKKSRKAPSKAKSPPTKSKPGSKLEKADSYPPVMRGLAPLPAPVL
GSGEMFTEEMARETLQGIFGYQDFRPGQFWAIQRALAGENSLLMLPTGAG
KSLCYQMAAACAPVGSLVMVVSPLISLMIDQLARLPPQVPGACLAGNLSM
RELARIIRDLRSGRLRVLFVSPEKLCSPSFGRLVGEDVAGRGGAAFPPVS
LVCIDEAHCISQWSHNFRPAFLRLGRNIENLLKPRALLAMTATADADVIG
DICARLRISPTEGVLLQPWRRHNLRLRVELLDGDAQLKRQRILDLLSRPP
YDRGSVIVYVRQQRDADVLKEFLVSQGQPAIAYHAGMDLKHRASAQSAWM
RRRGTRVSGHARVCVATIAFGLGVDKGDVRAVLHYEMPKSIENLVQETGR
AGRDGKEAWCPTLLSQDDFWRQHSLAHSDGVTALQLRGLLGMLSSLAAAA
KATPKAQNRGGGKEGGKEEWDKEGVQVAVDIKNTSIALDIREEVLETALV
LMELPPFSMLTLHGTVQDEFQVVFRKRQASMLRKSEAVIDTLLDVGTPSA
DLFERTSDTFGASYGYGSAACSLVRLASAMGPDWKPHDVVKELARLQAMG
ELQFTAAAKPHFHLTLLPPPSSTTSTSTEDEAAAEAAAVSSTPLSLHRIG
EVVAALAERMTAIEVASVQKVEQVYSVLRAAAGAPDEEGQEAQTLELIDA
YFAKKDLPLPLNLPMSFAPAIPSQVQVVMRRDANILLLDPRLVLLLQQVV
GRSRRRGAPTNVNLEMELRLYKARLVTRVFHGIGSPRVPLMEWRESPFWG
KHRQYKFEDVESTLSVGEG*

mRNA from alignment at scaffold_14:415680..420518-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_6053 ID=mRNA_6053|Name=jgi.p|Nanoce1779_2|593606|organism=Nannochloropsis oceanica|type=mRNA|length=4839bp|location=Sequence derived from alignment at scaffold_14:415680..420518- (Nannochloropsis oceanica)
AGCAACAGCAGCAGCAGCAGCAGCTATGTCTTGACAATGGGAAACACCAC
TCTACTTTCAGCCAAGGCGGGTATCCCAGCTCCTCCTCCTGCTGCCTCGT
CCTCCCTTGTGTCCTTTAAGTTCCGACGGCCCCCATTAGCTGTCACTACC
ACTCGGGTCACCAACGTGGCGGCATCGACAGCGGTGGGTGCTATTCCACC
TGCTCCCACCAGCAACGTCGTCCTAGGAAGTAAACGATGGACCGAAGAAG
CAGAGGCGGCTGACGGTATCCGCACCTCCACCACCGTAAGGAGCAGCAGC
AACAACAATAGCAATAGCAACAGCATTAGCAACAACCACAGCAGCAATAA
CCGTAGCAGTAGCAGCAACACCAGCATTACCAGTAAGAATGGAAGAATGC
TTCCGACTGCTGATGTGAAAGCTCTTACCTCCTTGGGCGCCAAGACCAAT
CGAGGTTTCCTGTCACGCGGCGCGGCGTGGAGGGATCGTGTAGCAAGTCT
GACGGAGGCGGAGATGGAGGAAGGGAAGGAAAAGCATTTGGGAAGTATGC
GTCTTTCTTTGCTTGAGGTGAAGAGCGAGGGAGAGGAGGAAGAGGAAAAA
GAAGAGGAGGAGGAGAAGATTAGGTTCGCCAAGGCAGCAGAGGCGATGGA
GATCCATGAGGATGAGGAAGATGAGGGCGTGAACGAGGATGATGCTTTTA
GAATCATGTCTGATTTAGATGAGGCTGGATCTAAGGCTTCAGTAGGAAAT
GAAGTCGACCACAACAACAAAATGATTGTCAAGGCTACTTGCAGCAGCAA
AACGACAGCAGTAACAGCAGCAGCAGCAGCAAGTATTCTTCCACCATCCA
CCACGATGACAAAGAAGCCAGCTGTGGCAGCAGCCTCAGTAGCTGTAGCG
CTTAAGAAAGATTCAATCACAGTAGTGCCAGTCGAAGTGACAGTAGCCCT
TCCCCTCCCCAAACCAAAGCCTAGGCAAAAAAAACTCAAACCAGGCGAGG
TGAGCGACAATTTTATCGCCCTTAACCTCAAGCGAAAAGGGACGGCCAAA
AACCGCAAGGTCAAATCTGTGAAGTCCCTCGCTCGTCGACAGGCATGGAT
CGAACAACGCCAGGAGTGTGATTCTAACAAGGGCAGCGGAACAAATGGTG
GGAAGCGCGGGGGGAACCGAATGTCTCGCCCCGGGCGAGCGGTGGATCCA
CTTGATGTGTGTTTGGACGTCCTAGAAGGTTTTTTGAAGGTCGGGGAAAA
GGACGAAGTGAAGGAAAGTATGATGGCACGGGCGTTGGAAGAAGTGTCGC
AGCTTCGTAGCAAAGACATAAGGGAGGTGCGTGATCCGGTTTTGAAGGCC
TTGGCACCTAAGTGTGCGCATCATCATCAACCGTCTCGCTTGTTGAGAGT
GAAGAAGTCAGGACCGAACAAGGGGAGGAGGTTTTACACGTGCAGTTTTC
CGAGGGGGGAGGAGTGTGGGTTCTTCATGTGGGTGGAGGATAACCCTGTC
TTAGTCGCTGCGGAGATTGGGCCTCCTTCTGTTATGTCTTTGCCTTCTCT
TGGGAAAGAGGAAGACGCAGAGTGGACGGAGCGGCAGATGGAAGGGTGGA
AGGCCAGGTTTAACAAGATGACAATTCCGGAGTTGAAGGACCAGGCGAAG
CGACGGGGACTGGCGCTGAGTGGGACGAAGAAGGTACTCGTAGCTCGATT
GATGGACGGGTTGGAAGAGGCGGTGGTCGCACCGGGAGCTACTGAGATAA
AGAAGGAACAGGAAGAAGAGGAGGAGAAGGAGAAGGAGGATGTGGAGGAG
GGAAGCGAAGAGGGCGACGACGAGGCCTCGGAATGTAATTCGGATGATGA
GGATTATGAGCTTGACATCATTGAGGCGGCCCTGGAGGGGCGTCCGGAGG
AGGTGGAAGAAGACAGTGGTGACGACGAGGGTCAGAAGGACGAAGGTGAG
GAGGACGAGGAGGACGAAGACGAGGCCGAGGACGAGGATGGAATTGCCGG
TGAAGCTGTCGCTGCCGTTCAGCCTGAAAGGAAGCGTCGTATCCAGTCGG
ACAACTCCTCGAACGAAGTTGAAGAAAAGGAAGCCATGGACGAAGGGGAG
ACGGGTACCAGCGACAGCGACAGCGATGATGAGGAGGAGAAAGCGCCTGC
TAAGAAGAAGAGCCGCAAGGCGCCATCAAAAGCAAAATCACCACCGACCA
AATCAAAACCCGGCAGCAAGCTAGAGAAGGCTGATTCTTATCCACCTGTC
ATGCGTGGACTTGCACCCCTTCCCGCGCCTGTTTTAGGGTCAGGAGAGAT
GTTCACAGAGGAGATGGCACGCGAGACACTGCAAGGCATATTTGGTTATC
AGGATTTCAGACCTGGACAGTTCTGGGCAATCCAACGGGCGTTGGCAGGG
GAAAATTCCTTGCTCATGCTCCCGACGGGCGCAGGGAAGAGTCTGTGTTA
TCAAATGGCAGCTGCGTGTGCACCTGTGGGATCGCTGGTTATGGTGGTCT
CGCCACTCATCTCTTTGATGATCGACCAGTTGGCACGTCTCCCTCCCCAG
GTGCCTGGGGCTTGTTTAGCGGGAAATTTGAGCATGCGGGAGCTAGCGAG
AATAATTCGGGATTTACGAAGTGGCCGGTTGAGAGTTTTATTTGTCTCGC
CCGAAAAACTCTGTAGCCCCTCGTTTGGACGACTGGTAGGGGAGGATGTG
GCGGGGAGAGGGGGCGCTGCGTTTCCGCCCGTATCCCTGGTGTGCATTGA
CGAAGCACACTGTATCTCCCAATGGTCCCACAATTTCCGCCCAGCCTTCC
TACGCCTAGGCCGCAACATCGAGAACTTGCTCAAGCCCCGCGCACTCCTT
GCAATGACTGCCACTGCCGACGCAGACGTTATTGGTGATATTTGCGCACG
GCTCCGCATCTCCCCGACAGAAGGAGTGCTCTTGCAGCCTTGGCGTCGTC
ACAACCTTCGTTTGCGTGTAGAGCTCCTGGACGGAGACGCTCAGCTTAAG
CGCCAACGTATCCTGGATCTGCTCTCCCGCCCACCCTACGATCGTGGCTC
AGTCATTGTTTACGTTCGGCAGCAGCGGGACGCCGATGTGTTAAAAGAAT
TTCTCGTTTCGCAAGGGCAGCCAGCCATTGCTTACCATGCTGGTATGGAT
CTGAAGCATCGGGCTTCGGCTCAAAGTGCGTGGATGCGACGGCGGGGCAC
AAGAGTGAGCGGGCATGCGCGCGTGTGTGTCGCGACGATTGCTTTTGGAT
TAGGGGTGGATAAGGGGGATGTGCGAGCAGTGTTACACTACGAAATGCCC
AAGAGTATTGAGAATCTGGTGCAGGAGACGGGCCGCGCTGGTCGGGACGG
GAAAGAAGCATGGTGTCCAACGTTGCTTTCTCAGGATGATTTTTGGCGGC
AGCATAGCCTGGCTCACTCGGATGGGGTTACGGCGTTGCAGCTGCGGGGG
CTTTTGGGGATGCTGTCCTCGCTGGCTGCAGCAGCGAAGGCCACGCCAAA
GGCTCAGAATCGTGGTGGTGGAAAAGAGGGAGGGAAGGAAGAATGGGACA
AAGAGGGGGTGCAGGTGGCTGTGGATATCAAGAATACCTCAATTGCGCTG
GATATTCGGGAGGAAGTGCTCGAGACTGCTTTGGTTCTGATGGAGCTCCC
GCCTTTCTCCATGCTCACCCTCCACGGGACGGTGCAAGATGAATTCCAGG
TCGTTTTCCGCAAGCGGCAGGCGAGTATGCTCCGCAAGAGCGAGGCCGTG
ATCGACACATTGCTGGACGTGGGAACGCCCTCCGCGGATCTATTCGAGCG
GACAAGTGATACATTTGGGGCCAGCTACGGGTATGGCTCAGCAGCCTGCT
CCCTGGTCCGCCTTGCCAGTGCCATGGGGCCCGATTGGAAACCACACGAT
GTCGTGAAGGAGCTAGCGAGGCTACAGGCTATGGGTGAGCTACAATTTAC
GGCCGCTGCCAAGCCTCATTTCCATTTGACCCTCCTGCCTCCCCCTTCGT
CAACCACATCCACATCCACTGAGGATGAAGCAGCTGCAGAAGCTGCAGCA
GTAAGCAGCACACCCCTGTCCCTACATCGAATTGGAGAGGTAGTTGCAGC
CTTGGCTGAACGCATGACAGCAATTGAAGTGGCCAGCGTTCAAAAAGTCG
AGCAAGTCTACAGCGTGCTCCGGGCGGCCGCGGGGGCCCCTGACGAGGAA
GGCCAGGAGGCACAAACCCTCGAGCTGATTGATGCCTACTTCGCCAAGAA
AGACTTACCTTTACCCTTAAACCTTCCCATGTCGTTTGCGCCCGCCATCC
CATCTCAGGTACAAGTGGTGATGCGGAGAGACGCCAATATCCTGCTGTTG
GATCCCCGCCTCGTCCTGCTGTTGCAGCAGGTGGTGGGCCGCAGTCGTCG
TCGAGGCGCACCAACAAATGTGAATTTGGAGATGGAGCTAAGGTTGTACA
AGGCTAGATTGGTGACGAGGGTTTTTCATGGGATTGGCAGCCCGAGGGTG
CCGTTGATGGAGTGGAGGGAAAGTCCTTTTTGGGGGAAGCATCGTCAGTA
CAAATTCGAGGATGTGGAAAGTACCCTGAGCGTTGGGGAGGGGTAGTAAT
GGGGAGGTCCCCAACGATGATATGGGGTCACGCGGCCGTTTATGAATGAA
ACGGTAAAGGAGGTGAAATATGGGGGCAATAGATTTGCGATGTGGATGTT
GTGTGGAGGTAGTGTGCACGTGCAAGGCACAAAGCATAATTGCAAAAGTA
AAGCATAGATGAATGTGATAATGTTTATTATCAGATGTCGCAAGAAGAAA
TCAGCAACGAAAGCTAATGAGATGACGAAAATAGTCTTA

Coding sequence (CDS) from alignment at scaffold_14:415680..420518-

>mRNA_6053 ID=mRNA_6053|Name=jgi.p|Nanoce1779_2|593606|organism=Nannochloropsis oceanica|type=CDS|length=4560bp|location=Sequence derived from alignment at scaffold_14:415680..420518- (Nannochloropsis oceanica)
ATGGGAAACACCACTCTACTTTCAGCCAAGGCGGGTATCCCAGCTCCTCC
TCCTGCTGCCTCGTCCTCCCTTGTGTCCTTTAAGTTCCGACGGCCCCCAT
TAGCTGTCACTACCACTCGGGTCACCAACGTGGCGGCATCGACAGCGGTG
GGTGCTATTCCACCTGCTCCCACCAGCAACGTCGTCCTAGGAAGTAAACG
ATGGACCGAAGAAGCAGAGGCGGCTGACGGTATCCGCACCTCCACCACCG
TAAGGAGCAGCAGCAACAACAATAGCAATAGCAACAGCATTAGCAACAAC
CACAGCAGCAATAACCGTAGCAGTAGCAGCAACACCAGCATTACCAGTAA
GAATGGAAGAATGCTTCCGACTGCTGATGTGAAAGCTCTTACCTCCTTGG
GCGCCAAGACCAATCGAGGTTTCCTGTCACGCGGCGCGGCGTGGAGGGAT
CGTGTAGCAAGTCTGACGGAGGCGGAGATGGAGGAAGGGAAGGAAAAGCA
TTTGGGAAGTATGCGTCTTTCTTTGCTTGAGGTGAAGAGCGAGGGAGAGG
AGGAAGAGGAAAAAGAAGAGGAGGAGGAGAAGATTAGGTTCGCCAAGGCA
GCAGAGGCGATGGAGATCCATGAGGATGAGGAAGATGAGGGCGTGAACGA
GGATGATGCTTTTAGAATCATGTCTGATTTAGATGAGGCTGGATCTAAGG
CTTCAGTAGGAAATGAAGTCGACCACAACAACAAAATGATTGTCAAGGCT
ACTTGCAGCAGCAAAACGACAGCAGTAACAGCAGCAGCAGCAGCAAGTAT
TCTTCCACCATCCACCACGATGACAAAGAAGCCAGCTGTGGCAGCAGCCT
CAGTAGCTGTAGCGCTTAAGAAAGATTCAATCACAGTAGTGCCAGTCGAA
GTGACAGTAGCCCTTCCCCTCCCCAAACCAAAGCCTAGGCAAAAAAAACT
CAAACCAGGCGAGGTGAGCGACAATTTTATCGCCCTTAACCTCAAGCGAA
AAGGGACGGCCAAAAACCGCAAGGTCAAATCTGTGAAGTCCCTCGCTCGT
CGACAGGCATGGATCGAACAACGCCAGGAGTGTGATTCTAACAAGGGCAG
CGGAACAAATGGTGGGAAGCGCGGGGGGAACCGAATGTCTCGCCCCGGGC
GAGCGGTGGATCCACTTGATGTGTGTTTGGACGTCCTAGAAGGTTTTTTG
AAGGTCGGGGAAAAGGACGAAGTGAAGGAAAGTATGATGGCACGGGCGTT
GGAAGAAGTGTCGCAGCTTCGTAGCAAAGACATAAGGGAGGTGCGTGATC
CGGTTTTGAAGGCCTTGGCACCTAAGTGTGCGCATCATCATCAACCGTCT
CGCTTGTTGAGAGTGAAGAAGTCAGGACCGAACAAGGGGAGGAGGTTTTA
CACGTGCAGTTTTCCGAGGGGGGAGGAGTGTGGGTTCTTCATGTGGGTGG
AGGATAACCCTGTCTTAGTCGCTGCGGAGATTGGGCCTCCTTCTGTTATG
TCTTTGCCTTCTCTTGGGAAAGAGGAAGACGCAGAGTGGACGGAGCGGCA
GATGGAAGGGTGGAAGGCCAGGTTTAACAAGATGACAATTCCGGAGTTGA
AGGACCAGGCGAAGCGACGGGGACTGGCGCTGAGTGGGACGAAGAAGGTA
CTCGTAGCTCGATTGATGGACGGGTTGGAAGAGGCGGTGGTCGCACCGGG
AGCTACTGAGATAAAGAAGGAACAGGAAGAAGAGGAGGAGAAGGAGAAGG
AGGATGTGGAGGAGGGAAGCGAAGAGGGCGACGACGAGGCCTCGGAATGT
AATTCGGATGATGAGGATTATGAGCTTGACATCATTGAGGCGGCCCTGGA
GGGGCGTCCGGAGGAGGTGGAAGAAGACAGTGGTGACGACGAGGGTCAGA
AGGACGAAGGTGAGGAGGACGAGGAGGACGAAGACGAGGCCGAGGACGAG
GATGGAATTGCCGGTGAAGCTGTCGCTGCCGTTCAGCCTGAAAGGAAGCG
TCGTATCCAGTCGGACAACTCCTCGAACGAAGTTGAAGAAAAGGAAGCCA
TGGACGAAGGGGAGACGGGTACCAGCGACAGCGACAGCGATGATGAGGAG
GAGAAAGCGCCTGCTAAGAAGAAGAGCCGCAAGGCGCCATCAAAAGCAAA
ATCACCACCGACCAAATCAAAACCCGGCAGCAAGCTAGAGAAGGCTGATT
CTTATCCACCTGTCATGCGTGGACTTGCACCCCTTCCCGCGCCTGTTTTA
GGGTCAGGAGAGATGTTCACAGAGGAGATGGCACGCGAGACACTGCAAGG
CATATTTGGTTATCAGGATTTCAGACCTGGACAGTTCTGGGCAATCCAAC
GGGCGTTGGCAGGGGAAAATTCCTTGCTCATGCTCCCGACGGGCGCAGGG
AAGAGTCTGTGTTATCAAATGGCAGCTGCGTGTGCACCTGTGGGATCGCT
GGTTATGGTGGTCTCGCCACTCATCTCTTTGATGATCGACCAGTTGGCAC
GTCTCCCTCCCCAGGTGCCTGGGGCTTGTTTAGCGGGAAATTTGAGCATG
CGGGAGCTAGCGAGAATAATTCGGGATTTACGAAGTGGCCGGTTGAGAGT
TTTATTTGTCTCGCCCGAAAAACTCTGTAGCCCCTCGTTTGGACGACTGG
TAGGGGAGGATGTGGCGGGGAGAGGGGGCGCTGCGTTTCCGCCCGTATCC
CTGGTGTGCATTGACGAAGCACACTGTATCTCCCAATGGTCCCACAATTT
CCGCCCAGCCTTCCTACGCCTAGGCCGCAACATCGAGAACTTGCTCAAGC
CCCGCGCACTCCTTGCAATGACTGCCACTGCCGACGCAGACGTTATTGGT
GATATTTGCGCACGGCTCCGCATCTCCCCGACAGAAGGAGTGCTCTTGCA
GCCTTGGCGTCGTCACAACCTTCGTTTGCGTGTAGAGCTCCTGGACGGAG
ACGCTCAGCTTAAGCGCCAACGTATCCTGGATCTGCTCTCCCGCCCACCC
TACGATCGTGGCTCAGTCATTGTTTACGTTCGGCAGCAGCGGGACGCCGA
TGTGTTAAAAGAATTTCTCGTTTCGCAAGGGCAGCCAGCCATTGCTTACC
ATGCTGGTATGGATCTGAAGCATCGGGCTTCGGCTCAAAGTGCGTGGATG
CGACGGCGGGGCACAAGAGTGAGCGGGCATGCGCGCGTGTGTGTCGCGAC
GATTGCTTTTGGATTAGGGGTGGATAAGGGGGATGTGCGAGCAGTGTTAC
ACTACGAAATGCCCAAGAGTATTGAGAATCTGGTGCAGGAGACGGGCCGC
GCTGGTCGGGACGGGAAAGAAGCATGGTGTCCAACGTTGCTTTCTCAGGA
TGATTTTTGGCGGCAGCATAGCCTGGCTCACTCGGATGGGGTTACGGCGT
TGCAGCTGCGGGGGCTTTTGGGGATGCTGTCCTCGCTGGCTGCAGCAGCG
AAGGCCACGCCAAAGGCTCAGAATCGTGGTGGTGGAAAAGAGGGAGGGAA
GGAAGAATGGGACAAAGAGGGGGTGCAGGTGGCTGTGGATATCAAGAATA
CCTCAATTGCGCTGGATATTCGGGAGGAAGTGCTCGAGACTGCTTTGGTT
CTGATGGAGCTCCCGCCTTTCTCCATGCTCACCCTCCACGGGACGGTGCA
AGATGAATTCCAGGTCGTTTTCCGCAAGCGGCAGGCGAGTATGCTCCGCA
AGAGCGAGGCCGTGATCGACACATTGCTGGACGTGGGAACGCCCTCCGCG
GATCTATTCGAGCGGACAAGTGATACATTTGGGGCCAGCTACGGGTATGG
CTCAGCAGCCTGCTCCCTGGTCCGCCTTGCCAGTGCCATGGGGCCCGATT
GGAAACCACACGATGTCGTGAAGGAGCTAGCGAGGCTACAGGCTATGGGT
GAGCTACAATTTACGGCCGCTGCCAAGCCTCATTTCCATTTGACCCTCCT
GCCTCCCCCTTCGTCAACCACATCCACATCCACTGAGGATGAAGCAGCTG
CAGAAGCTGCAGCAGTAAGCAGCACACCCCTGTCCCTACATCGAATTGGA
GAGGTAGTTGCAGCCTTGGCTGAACGCATGACAGCAATTGAAGTGGCCAG
CGTTCAAAAAGTCGAGCAAGTCTACAGCGTGCTCCGGGCGGCCGCGGGGG
CCCCTGACGAGGAAGGCCAGGAGGCACAAACCCTCGAGCTGATTGATGCC
TACTTCGCCAAGAAAGACTTACCTTTACCCTTAAACCTTCCCATGTCGTT
TGCGCCCGCCATCCCATCTCAGGTACAAGTGGTGATGCGGAGAGACGCCA
ATATCCTGCTGTTGGATCCCCGCCTCGTCCTGCTGTTGCAGCAGGTGGTG
GGCCGCAGTCGTCGTCGAGGCGCACCAACAAATGTGAATTTGGAGATGGA
GCTAAGGTTGTACAAGGCTAGATTGGTGACGAGGGTTTTTCATGGGATTG
GCAGCCCGAGGGTGCCGTTGATGGAGTGGAGGGAAAGTCCTTTTTGGGGG
AAGCATCGTCAGTACAAATTCGAGGATGTGGAAAGTACCCTGAGCGTTGG
GGAGGGGTAG

Synonyms

Publications