jgi.p|Nanoce1779_2|556859, mRNA_6038 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|556859
Unique Name	mRNA_6038
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	4964
Alignment location	scaffold_14:374160..379200 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	556945
Track	FilteredModels2
ProteinId	556859

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_14	supercontig	scaffold_14:374160..379200 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|556859	gene_6038	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|556859	mRNA_6038-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_6038	CDS_6038	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_14:374160..379200+
coding sequence from alignment at scaffold_14:374160..379200+

mRNA sequence

>mRNA_6038 ID=mRNA_6038|Name=jgi.p|Nanoce1779_2|556859|organism=Nannochloropsis oceanica|type=mRNA|length=4964bp
GCACTGGGCGTTAGTTCCTTGGCCCTGAATCAGGGTCAAGCATCTGTGCA
GGGGCTTTGTCCCTTGCGCCCGAATCAACATTACCCATTGCACCAGTACC
TTTTAAACATATTTTTCCATCTCATAATGATTCAAGGATCGAGTTGTGAC
AGCAAAAAACCCGCAGCTTTGGTCCCCATCACGTCGTGGCACAAAACTCT
CCTCTAGCCCCAGCCGCTCGAGCATCCAATGCCAAGCAGCGGCACACGTG
GTTCACTCTTTGCCACTACACTCGCATATATGGTCATATCGTTGAGTTGC
ATTGTGGTCTACGGCAGGCATAGCACACACAGTCTGGCGTTTTCGGCCAT
TGGTGGCCGGGGATCGGGACTGTGGCGGGCTCCTGTTTCCTTTTCTTTTT
CTTCAGTGGACCACACCTTCTCTCAACAGGAGAGCCGGCTGTCACTGAGA
CGCCACACACGGGCAGCAGGGGCTGAAAACGAAGACGGCACGGTGCAGAT
TGCTGCAGCAGACCCCGTCACTCCTCCCGCGATCGCTGCCAAGGAAAAGT
CCACTGGTGCAGAAATCGCTCCCAGAAAGAAGACCAAGAACATATCCACG
AGCAGTATCGCCGCCGCTGCACCGGCAAGGACCATCAAGCCAAAAGCAGT
ACCTAAACCCAAAAAAGCTGCATCGCCCCCCTTTTCCCCTCACCCCCTCT
GGCAGCAACAACTAGAACACATCCGCAAAATGCGCGAAGCAGGCCCTGCT
GCACCTGTGGACCTTTTTGGGTGCGCCGAGTTGGGAAAACGCCACGCCAC
TTCCCCTGAGCATATGAGGTTGCAGACATTGATTTCATCGATGTTAAGTA
GTCAAACGACGGACTTGGTGAACGAGAAGGCCATGGGTCGGTTATATGAG
GCGTGTGGAATCACTATTGAAGGGTTGGAAGAGCTGGGGGAGGAAGGGAT
TGGAGAGGTGATCAAGCCAGTGTCTTTCTATACGGCCAAATCGGCGAATA
TCATCAAGGTGTGCAAGATTTTAAAGGTACGGCTGGGGAAGGATGGAGGG
AACGCTGACACGATAACTGTTCAGGTGGGAATAAGGGAGCAGGACGAATG
ATTTCATCTGTTGTCTTGTCGTTAAATATATTTCCTCCCTCGAAAAAATA
TACAGGAAGAATACGCCGGTGACATACCCCGCACGTTCGAAGATTTAATG
TCGCTTCCTGGCGTGGGCCCTAAAATGGCTATCCTCGTCTGTACGTACCC
ATGGAGGAAGGGTGAAATGGGAGGGGGGACCTTTACGTGTAAACTGGCAT
GTTACGAATGTATAACTTTCATAGAATATAGTCATTTCCCCAGTTTGACC
GCATTCATTCATACATTCATCTTCCCTTCCTCCGTCCCTTCCTCAGTCAA
TCCGTCCATCCCTCCCTATTCCCTCCCTCCCCCCCTCCACCTCTTTCACA
CCCAAGGCGCCTATGGATGGGGGGAAGTCGTCGGCATCTGTGTCGATACC
CACGTGCATCGAATCAGGTACGTACCTTGTAAATCTCCCCACCTTCTCTC
TCCTCTTACCTTCCTCGCTATGTTAGAAAACGCCTTATCCCTCCCCCCTG
TTACCCTATCTTCCTGTCTCCCTCCGTCCTTCTGCAGCAATCGCCTCGGA
TGGGCCAACACCTGGAACTACAAAAATCCTAAGGCCCAAAACCCTGAAAA
AACACGCAAGCTCCTCGAATCCTGGATGCCGAGGGAGAATTGGGAGGAGG
TATGTTAATATATGTGGCGGAGGATGTAGGATTGCGGGGTTTTGTCTCTT
CACATGCATGCTCGTATTCTATACCCTTCTTGGTCGCTCTTATAAGCGGC
CTTGGTCTTTTAAGTAGCGTAGAAGCAAGTGAAACATCATTTTATCCTTG
ATATATTTTCTCTTTATCAGGTGAACCCTTTGCTGGTGGGACTGGGGCAG
CAAACCTGTAGGGCCGTCAATCCAAAATGCTGGGAATGCAGCCTCACGGC
CATTTGCCCCTCCTACTTGCCACCGGTTTGAGGAGGAGTAATTTAGTGAG
AGGGCAACGGATGTGATATGTGTAGCTGCGAATGGTGTACAATGAATGTT
AAGTTCAGGAACGAAAGAATGAAAAACTACTGCATTACGATACGTGGAAA
TGTACGTTCCTGAATGCATTTCTTGCTGTACCGTTAAGGACCACCCAAAA
ATGGAGTCAAGAAAGCACACGTGATAAACTATAGGGTACCATTTTTATAA
AGTGCATTGCGTGTATCTTCGATGATGTTTCAAAACGAAATGGATTGGCT
TCGGATACTCCCCTCGTTCTCATGTGCCATGGTTTCTTCTGCACTTGCTC
TTGCCTTTTCCGACTGCATTCCATATTTCACACTACGACGAACCCACACA
TAACCATACAGGTAGCATAAAGCTACATCTGATCTTACGCAAGCTGCATC
GACAGGTGCTGATGATACCACCCAAGCTTTGTCGTGCCTCCAACTTGTCT
CCCTCTACGCTGCAGCAGTCATGACATCAGAGCCGCACACACCTCTGCTC
ATGCCCGCAGCGGCTACGGCGCAACCCCTTTCCACCGCTGCAGCTTACTG
TCGAACAGTTCCACCTACTCAAGCATCCAAACAACTTTTCAGTCATAAGA
ACAACGATGACGATGAGCAAGAGCTCTGCTCCTCCCCCACTCTCCTTGGT
CCAGCAGCTGATCCCTTTCTCCGGAGGGCATGGAGGTGCTTCCGCGTCCG
CCTTGCCCAGCTGGCTTACCGAAGACATCTGTTGGAAACTATCAACACGA
TGACAACGACATCCACGTGCTTGACGAGCCCCTATTCAGACCACGGTAGC
AGCAACCACCACCATCGCAGCTGCTTCGGCAGTACCTTCAGCAGCGGAAG
CAAAAGCGAATGCAACAGAGTGCGACAGACATATGCATGTAGCCACGAAA
GGGCTTCGATCCTCGAGCTATTGCGCCTCGCAAAGAAATCAAACTATTTC
TCAGTGCAATGCTTTTTCGCGCATTGCCTGCAGGTGTGGGGTCATCGCAG
CAGCAGCGCACCTCCACCCATCCTTTCTTCCCTCTCCTTTTCGTCGTCCT
CTTCTAGCCCCCCCCCCTTAATCCTCTCCATCAAATTACAATCAGATCAC
TGTCCCGCGGTTCTAGACCGCGTCGCTCAAGCGTGGTTTTTGCGACGATG
GCTCACTCGGTGGCGTTCACGTTGCCAACGCCATCACCTTATTGATATGG
CTCTGCGTTTCCATCACAAGAATTTAGCTCATTTGGCCCTGAGTACGTTG
TTTGTCAATCGTCGGCGAAAACAATATATGCAATTAGAGGGGGCGAGGGC
AGATGCCTTTCATGTTCGGCGACTTGTTGCATGGTGGGAGCCCTCGGCCA
AGGAAAGAAGGAAGCAGCAGCATCAGCAAAAACAACAGCAGCGGCAAAAG
CAGCAGCAGCAGGAACAGCAGCGTGATTTTTCTGTGTTTTTACCCGATGT
TGACATCATGTTGCACTCCAACTCCTCTGATGGTACCTCATCATGGCTGT
CCTCGCCCTTCTCCTTGTCGTCCATGCCGGGGATGCGAATTGACATGGGC
ATTTGCGTCGAAGGCACTCTCTCCGTCCCATCCTTTTCAGCACCCCGTGG
CAGCAAGGGAGTAGAAAACGAAGACCATCCCCACCCCGACGAATCCTCTT
TCTTTCTCCCTCCCCTACCCGAGATACGCCTACTCCAACACCGCGTCTTG
GCCGCCTTGGGCACTAACCTCAACCGCCACATGCACTGTACAATAGCAGA
AAATCTCTTTACTAATCATCAGCATCATCGATATTTGCGACGCTGGACCA
GGCGAAGACGCACTCATGCATCGATCCAGCGAGCTAATTTCATCGCAACA
CGAGCGCACAAATTACACACATGTCGACGAGCCCTCCCGCTCCTTCTCCT
CCGTACAAACGCCCAACGACTGCAATCAACATGTATTTACACAGCCAACC
TTGTCTGGGCCCGTCGTCGCGCCACCACCGCACTATGGCGACTCAGCCTA
TGCGCACGACAACATAACGTCCATCAAAGAGCCATCGAAATCATGCTTCA
ATCGCAACGTCTTCACGCAGTCACTCGCGCCATGTCCCTCCTTTACGCTT
CAGCCCGAAAGGTGCTCCTTCACTTGCGTGTTTTCACAATTGTTCATCGA
AAAGAGAGCTGCCGACGGGCCCTGCGACGATGGCAACGCAGAGCAGCCGC
GGCAGCAGTCGGGCGCGTACGGCAGCAGAAGGCGGTAATTCTCCACAAGT
CGACATCCCTTCAGCGTGCCTTGCTGCAGCGATGGAGCCCGCGGGTGGCG
TTTCAGCAGAAAAAAGGCAGACATCTTCTAAGTCTTGCTTCATCACATTG
CCTCCGTCGGCGGCTGCATGTATCACTGCAGAAGTTGCAGCGATTTACAC
GACGGGCTGCTCTCCTTGCGCACGTTGCGGGTTTGGGACTTCATGCTCGA
ATGCGGCGTGTTATATGCGCTTGGGCCAGCGTGGTGCGCCAAGAAGGAGA
ACTAAGAGCGATGGGACTGGCTTTGGCATGTCGGAAAGAGTTATTGTTGC
TTCAAAAAGTGTTTGGAGTCATTCGAGATTTGGCTCAGGAGCAGGTGCGA
TTAAGGAGAGCGTATAACCATGTCATCAGGCAGAGGGGGGAAAGAATAGG
GAGGGAGGTTCTAGTGACGTGGTGGTGGAGGGCGCGGGTACAGGAGTATG
AAGGAGAGAGATTTGTCGCGTTTGTGCATGCGTGTCTGACTAGTTGGATG
TTGCGAAGTCAGATGGGAAACGGGCAGAGATGGGCGTGTAAGGAGGGAGC
TGAACACCATGACCGGAGGGCGAAGCGCAGGGCATTAATATGGTGGAGGG
AGGGGAGGAGGAAGAGCGGGAAGAGGAGGGGAATATGTACAGATGGACCA
GAAGAAGAGGATGC

protein sequence of jgi.p|Nanoce1779_2|556859

>mRNA_6038-protein ID=mRNA_6038-protein|Name=jgi.p|Nanoce1779_2|556859|organism=Nannochloropsis oceanica|type=polypeptide|length=814bp
MTSEPHTPLLMPAAATAQPLSTAAAYCRTVPPTQASKQLFSHKNNDDDEQ
ELCSSPTLLGPAADPFLRRAWRCFRVRLAQLAYRRHLLETINTMTTTSTC
LTSPYSDHGSSNHHHRSCFGSTFSSGSKSECNRVRQTYACSHERASILEL
LRLAKKSNYFSVQCFFAHCLQVWGHRSSSAPPPILSSLSFSSSSSSPPPL
ILSIKLQSDHCPAVLDRVAQAWFLRRWLTRWRSRCQRHHLIDMALRFHHK
NLAHLALSTLFVNRRRKQYMQLEGARADAFHVRRLVAWWEPSAKERRKQQ
HQQKQQQRQKQQQQEQQRDFSVFLPDVDIMLHSNSSDGTSSWLSSPFSLS
SMPGMRIDMGICVEGTLSVPSFSAPRGSKGVENEDHPHPDESSFFLPPLP
EIRLLQHRVLAALGTNLNRHMHCTIAENLFTNHQHHRYLRRWTRRRRTHA
SIQRANFIATRAHKLHTCRRALPLLLLRTNAQRLQSTCIYTANLVWARRR
ATTALWRLSLCARQHNVHQRAIEIMLQSQRLHAVTRAMSLLYASARKVLL
HLRVFTIVHRKESCRRALRRWQRRAAAAAVGRVRQQKAVILHKSTSLQRA
LLQRWSPRVAFQQKKGRHLLSLASSHCLRRRLHVSLQKLQRFTRRAALLA
HVAGLGLHARMRRVICAWASVVRQEGELRAMGLALACRKELLLLQKVFGV
IRDLAQEQVRLRRAYNHVIRQRGERIGREVLVTWWWRARVQEYEGERFVA
FVHACLTSWMLRSQMGNGQRWACKEGAEHHDRRAKRRALIWWREGRRKSG
KRRGICTDGPEEED

mRNA from alignment at scaffold_14:374160..379200+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_6038 ID=mRNA_6038|Name=jgi.p|Nanoce1779_2|556859|organism=Nannochloropsis oceanica|type=mRNA|length=5041bp|location=Sequence derived from alignment at scaffold_14:374160..379200+ (Nannochloropsis oceanica)
GCACTGGGCGTTAGTTCCTTGGCCCTGAATCAGGGTCAAGCATCTGTGCA
GGGGCTTTGTCCCTTGCGCCCGAATCAACATTACCCATTGCACCAGTACC
TTTTAAACATATTTTTCCATCTCATAATGATTCAAGGATCGAGTTGTGAC
AGCAAAAAACCCGCAGCTTTGGTCCCCATCACGTCGTGGCACAAAACTCT
CCTCTAGCCCCAGCCGCTCGAGCATCCAATGCCAAGCAGCGGCACACGTG
GTTCACTCTTTGCCACTACACTCGCATATATGGTCATATCGTTGAGTTGC
ATTGTGGTCTACGGCAGGCATAGGTGCGTCCCTCTTATCTATACTACATT
CTGACTGCTTTGGTCTTCGTCTCATCCGATCGGGCCCAACCCAACACCAG
CACACACAGTCTGGCGTTTTCGGCCATTGGTGGCCGGGGATCGGGACTGT
GGCGGGCTCCTGTTTCCTTTTCTTTTTCTTCAGTGGACCACACCTTCTCT
CAACAGGAGAGCCGGCTGTCACTGAGACGCCACACACGGGCAGCAGGGGC
TGAAAACGAAGACGGCACGGTGCAGATTGCTGCAGCAGACCCCGTCACTC
CTCCCGCGATCGCTGCCAAGGAAAAGTCCACTGGTGCAGAAATCGCTCCC
AGAAAGAAGACCAAGAACATATCCACGAGCAGTATCGCCGCCGCTGCACC
GGCAAGGACCATCAAGCCAAAAGCAGTACCTAAACCCAAAAAAGCTGCAT
CGCCCCCCTTTTCCCCTCACCCCCTCTGGCAGCAACAACTAGAACACATC
CGCAAAATGCGCGAAGCAGGCCCTGCTGCACCTGTGGACCTTTTTGGGTG
CGCCGAGTTGGGAAAACGCCACGCCACTTCCCCTGAGCATATGAGGTTGC
AGACATTGATTTCATCGATGTTAAGTAGTCAAACGACGGACTTGGTGAAC
GAGAAGGCCATGGGTCGGTTATATGAGGCGTGTGGAATCACTATTGAAGG
GTTGGAAGAGCTGGGGGAGGAAGGGATTGGAGAGGTGATCAAGCCAGTGT
CTTTCTATACGGCCAAATCGGCGAATATCATCAAGGTGTGCAAGATTTTA
AAGGTACGGCTGGGGAAGGATGGAGGGAACGCTGACACGATAACTGTTCA
GGTGGGAATAAGGGAGCAGGACGAATGATTTCATCTGTTGTCTTGTCGTT
AAATATATTTCCTCCCTCGAAAAAATATACAGGAAGAATACGCCGGTGAC
ATACCCCGCACGTTCGAAGATTTAATGTCGCTTCCTGGCGTGGGCCCTAA
AATGGCTATCCTCGTCTGTACGTACCCATGGAGGAAGGGTGAAATGGGAG
GGGGGACCTTTACGTGTAAACTGGCATGTTACGAATGTATAACTTTCATA
GAATATAGTCATTTCCCCAGTTTGACCGCATTCATTCATACATTCATCTT
CCCTTCCTCCGTCCCTTCCTCAGTCAATCCGTCCATCCCTCCCTATTCCC
TCCCTCCCCCCCTCCACCTCTTTCACACCCAAGGCGCCTATGGATGGGGG
GAAGTCGTCGGCATCTGTGTCGATACCCACGTGCATCGAATCAGGTACGT
ACCTTGTAAATCTCCCCACCTTCTCTCTCCTCTTACCTTCCTCGCTATGT
TAGAAAACGCCTTATCCCTCCCCCCTGTTACCCTATCTTCCTGTCTCCCT
CCGTCCTTCTGCAGCAATCGCCTCGGATGGGCCAACACCTGGAACTACAA
AAATCCTAAGGCCCAAAACCCTGAAAAAACACGCAAGCTCCTCGAATCCT
GGATGCCGAGGGAGAATTGGGAGGAGGTATGTTAATATATGTGGCGGAGG
ATGTAGGATTGCGGGGTTTTGTCTCTTCACATGCATGCTCGTATTCTATA
CCCTTCTTGGTCGCTCTTATAAGCGGCCTTGGTCTTTTAAGTAGCGTAGA
AGCAAGTGAAACATCATTTTATCCTTGATATATTTTCTCTTTATCAGGTG
AACCCTTTGCTGGTGGGACTGGGGCAGCAAACCTGTAGGGCCGTCAATCC
AAAATGCTGGGAATGCAGCCTCACGGCCATTTGCCCCTCCTACTTGCCAC
CGGTTTGAGGAGGAGTAATTTAGTGAGAGGGCAACGGATGTGATATGTGT
AGCTGCGAATGGTGTACAATGAATGTTAAGTTCAGGAACGAAAGAATGAA
AAACTACTGCATTACGATACGTGGAAATGTACGTTCCTGAATGCATTTCT
TGCTGTACCGTTAAGGACCACCCAAAAATGGAGTCAAGAAAGCACACGTG
ATAAACTATAGGGTACCATTTTTATAAAGTGCATTGCGTGTATCTTCGAT
GATGTTTCAAAACGAAATGGATTGGCTTCGGATACTCCCCTCGTTCTCAT
GTGCCATGGTTTCTTCTGCACTTGCTCTTGCCTTTTCCGACTGCATTCCA
TATTTCACACTACGACGAACCCACACATAACCATACAGGTAGCATAAAGC
TACATCTGATCTTACGCAAGCTGCATCGACAGGTGCTGATGATACCACCC
AAGCTTTGTCGTGCCTCCAACTTGTCTCCCTCTACGCTGCAGCAGTCATG
ACATCAGAGCCGCACACACCTCTGCTCATGCCCGCAGCGGCTACGGCGCA
ACCCCTTTCCACCGCTGCAGCTTACTGTCGAACAGTTCCACCTACTCAAG
CATCCAAACAACTTTTCAGTCATAAGAACAACGATGACGATGAGCAAGAG
CTCTGCTCCTCCCCCACTCTCCTTGGTCCAGCAGCTGATCCCTTTCTCCG
GAGGGCATGGAGGTGCTTCCGCGTCCGCCTTGCCCAGCTGGCTTACCGAA
GACATCTGTTGGAAACTATCAACACGATGACAACGACATCCACGTGCTTG
ACGAGCCCCTATTCAGACCACGGTAGCAGCAACCACCACCATCGCAGCTG
CTTCGGCAGTACCTTCAGCAGCGGAAGCAAAAGCGAATGCAACAGAGTGC
GACAGACATATGCATGTAGCCACGAAAGGGCTTCGATCCTCGAGCTATTG
CGCCTCGCAAAGAAATCAAACTATTTCTCAGTGCAATGCTTTTTCGCGCA
TTGCCTGCAGGTGTGGGGTCATCGCAGCAGCAGCGCACCTCCACCCATCC
TTTCTTCCCTCTCCTTTTCGTCGTCCTCTTCTAGCCCCCCCCCCTTAATC
CTCTCCATCAAATTACAATCAGATCACTGTCCCGCGGTTCTAGACCGCGT
CGCTCAAGCGTGGTTTTTGCGACGATGGCTCACTCGGTGGCGTTCACGTT
GCCAACGCCATCACCTTATTGATATGGCTCTGCGTTTCCATCACAAGAAT
TTAGCTCATTTGGCCCTGAGTACGTTGTTTGTCAATCGTCGGCGAAAACA
ATATATGCAATTAGAGGGGGCGAGGGCAGATGCCTTTCATGTTCGGCGAC
TTGTTGCATGGTGGGAGCCCTCGGCCAAGGAAAGAAGGAAGCAGCAGCAT
CAGCAAAAACAACAGCAGCGGCAAAAGCAGCAGCAGCAGGAACAGCAGCG
TGATTTTTCTGTGTTTTTACCCGATGTTGACATCATGTTGCACTCCAACT
CCTCTGATGGTACCTCATCATGGCTGTCCTCGCCCTTCTCCTTGTCGTCC
ATGCCGGGGATGCGAATTGACATGGGCATTTGCGTCGAAGGCACTCTCTC
CGTCCCATCCTTTTCAGCACCCCGTGGCAGCAAGGGAGTAGAAAACGAAG
ACCATCCCCACCCCGACGAATCCTCTTTCTTTCTCCCTCCCCTACCCGAG
ATACGCCTACTCCAACACCGCGTCTTGGCCGCCTTGGGCACTAACCTCAA
CCGCCACATGCACTGTACAATAGCAGAAAATCTCTTTACTAATCATCAGC
ATCATCGATATTTGCGACGCTGGACCAGGCGAAGACGCACTCATGCATCG
ATCCAGCGAGCTAATTTCATCGCAACACGAGCGCACAAATTACACACATG
TCGACGAGCCCTCCCGCTCCTTCTCCTCCGTACAAACGCCCAACGACTGC
AATCAACATGTATTTACACAGCCAACCTTGTCTGGGCCCGTCGTCGCGCC
ACCACCGCACTATGGCGACTCAGCCTATGCGCACGACAACATAACGTCCA
TCAAAGAGCCATCGAAATCATGCTTCAATCGCAACGTCTTCACGCAGTCA
CTCGCGCCATGTCCCTCCTTTACGCTTCAGCCCGAAAGGTGCTCCTTCAC
TTGCGTGTTTTCACAATTGTTCATCGAAAAGAGAGCTGCCGACGGGCCCT
GCGACGATGGCAACGCAGAGCAGCCGCGGCAGCAGTCGGGCGCGTACGGC
AGCAGAAGGCGGTAATTCTCCACAAGTCGACATCCCTTCAGCGTGCCTTG
CTGCAGCGATGGAGCCCGCGGGTGGCGTTTCAGCAGAAAAAAGGCAGACA
TCTTCTAAGTCTTGCTTCATCACATTGCCTCCGTCGGCGGCTGCATGTAT
CACTGCAGAAGTTGCAGCGATTTACACGACGGGCTGCTCTCCTTGCGCAC
GTTGCGGGTTTGGGACTTCATGCTCGAATGCGGCGTGTTATATGCGCTTG
GGCCAGCGTGGTGCGCCAAGAAGGAGAACTAAGAGCGATGGGACTGGCTT
TGGCATGTCGGAAAGAGTTATTGTTGCTTCAAAAAGTGTTTGGAGTCATT
CGAGATTTGGCTCAGGAGCAGGTGCGATTAAGGAGAGCGTATAACCATGT
CATCAGGCAGAGGGGGGAAAGAATAGGGAGGGAGGTTCTAGTGACGTGGT
GGTGGAGGGCGCGGGTACAGGAGTATGAAGGAGAGAGATTTGTCGCGTTT
GTGCATGCGTGTCTGACTAGTTGGATGTTGCGAAGTCAGATGGGAAACGG
GCAGAGATGGGCGTGTAAGGAGGGAGCTGAACACCATGACCGGAGGGCGA
AGCGCAGGGCATTAATATGGTGGAGGGAGGGGAGGAGGAAGAGCGGGAAG
AGGAGGGGAATATGTACAGATGGACCAGAAGAAGAGGATGC

Coding sequence (CDS) from alignment at scaffold_14:374160..379200+

>mRNA_6038 ID=mRNA_6038|Name=jgi.p|Nanoce1779_2|556859|organism=Nannochloropsis oceanica|type=CDS|length=2442bp|location=Sequence derived from alignment at scaffold_14:374160..379200+ (Nannochloropsis oceanica)
ATGACATCAGAGCCGCACACACCTCTGCTCATGCCCGCAGCGGCTACGGC
GCAACCCCTTTCCACCGCTGCAGCTTACTGTCGAACAGTTCCACCTACTC
AAGCATCCAAACAACTTTTCAGTCATAAGAACAACGATGACGATGAGCAA
GAGCTCTGCTCCTCCCCCACTCTCCTTGGTCCAGCAGCTGATCCCTTTCT
CCGGAGGGCATGGAGGTGCTTCCGCGTCCGCCTTGCCCAGCTGGCTTACC
GAAGACATCTGTTGGAAACTATCAACACGATGACAACGACATCCACGTGC
TTGACGAGCCCCTATTCAGACCACGGTAGCAGCAACCACCACCATCGCAG
CTGCTTCGGCAGTACCTTCAGCAGCGGAAGCAAAAGCGAATGCAACAGAG
TGCGACAGACATATGCATGTAGCCACGAAAGGGCTTCGATCCTCGAGCTA
TTGCGCCTCGCAAAGAAATCAAACTATTTCTCAGTGCAATGCTTTTTCGC
GCATTGCCTGCAGGTGTGGGGTCATCGCAGCAGCAGCGCACCTCCACCCA
TCCTTTCTTCCCTCTCCTTTTCGTCGTCCTCTTCTAGCCCCCCCCCCTTA
ATCCTCTCCATCAAATTACAATCAGATCACTGTCCCGCGGTTCTAGACCG
CGTCGCTCAAGCGTGGTTTTTGCGACGATGGCTCACTCGGTGGCGTTCAC
GTTGCCAACGCCATCACCTTATTGATATGGCTCTGCGTTTCCATCACAAG
AATTTAGCTCATTTGGCCCTGAGTACGTTGTTTGTCAATCGTCGGCGAAA
ACAATATATGCAATTAGAGGGGGCGAGGGCAGATGCCTTTCATGTTCGGC
GACTTGTTGCATGGTGGGAGCCCTCGGCCAAGGAAAGAAGGAAGCAGCAG
CATCAGCAAAAACAACAGCAGCGGCAAAAGCAGCAGCAGCAGGAACAGCA
GCGTGATTTTTCTGTGTTTTTACCCGATGTTGACATCATGTTGCACTCCA
ACTCCTCTGATGGTACCTCATCATGGCTGTCCTCGCCCTTCTCCTTGTCG
TCCATGCCGGGGATGCGAATTGACATGGGCATTTGCGTCGAAGGCACTCT
CTCCGTCCCATCCTTTTCAGCACCCCGTGGCAGCAAGGGAGTAGAAAACG
AAGACCATCCCCACCCCGACGAATCCTCTTTCTTTCTCCCTCCCCTACCC
GAGATACGCCTACTCCAACACCGCGTCTTGGCCGCCTTGGGCACTAACCT
CAACCGCCACATGCACTGTACAATAGCAGAAAATCTCTTTACTAATCATC
AGCATCATCGATATTTGCGACGCTGGACCAGGCGAAGACGCACTCATGCA
TCGATCCAGCGAGCTAATTTCATCGCAACACGAGCGCACAAATTACACAC
ATGTCGACGAGCCCTCCCGCTCCTTCTCCTCCGTACAAACGCCCAACGAC
TGCAATCAACATGTATTTACACAGCCAACCTTGTCTGGGCCCGTCGTCGC
GCCACCACCGCACTATGGCGACTCAGCCTATGCGCACGACAACATAACGT
CCATCAAAGAGCCATCGAAATCATGCTTCAATCGCAACGTCTTCACGCAG
TCACTCGCGCCATGTCCCTCCTTTACGCTTCAGCCCGAAAGGTGCTCCTT
CACTTGCGTGTTTTCACAATTGTTCATCGAAAAGAGAGCTGCCGACGGGC
CCTGCGACGATGGCAACGCAGAGCAGCCGCGGCAGCAGTCGGGCGCGTAC
GGCAGCAGAAGGCGGTAATTCTCCACAAGTCGACATCCCTTCAGCGTGCC
TTGCTGCAGCGATGGAGCCCGCGGGTGGCGTTTCAGCAGAAAAAAGGCAG
ACATCTTCTAAGTCTTGCTTCATCACATTGCCTCCGTCGGCGGCTGCATG
TATCACTGCAGAAGTTGCAGCGATTTACACGACGGGCTGCTCTCCTTGCG
CACGTTGCGGGTTTGGGACTTCATGCTCGAATGCGGCGTGTTATATGCGC
TTGGGCCAGCGTGGTGCGCCAAGAAGGAGAACTAAGAGCGATGGGACTGG
CTTTGGCATGTCGGAAAGAGTTATTGTTGCTTCAAAAAGTGTTTGGAGTC
ATTCGAGATTTGGCTCAGGAGCAGGTGCGATTAAGGAGAGCGTATAACCA
TGTCATCAGGCAGAGGGGGGAAAGAATAGGGAGGGAGGTTCTAGTGACGT
GGTGGTGGAGGGCGCGGGTACAGGAGTATGAAGGAGAGAGATTTGTCGCG
TTTGTGCATGCGTGTCTGACTAGTTGGATGTTGCGAAGTCAGATGGGAAA
CGGGCAGAGATGGGCGTGTAAGGAGGGAGCTGAACACCATGACCGGAGGG
CGAAGCGCAGGGCATTAATATGGTGGAGGGAGGGGAGGAGGAAGAGCGGG
AAGAGGAGGGGAATATGTACAGATGGACCAGAAGAAGAGGAT

Synonyms

Publications