jgi.p|Nanoce1779_2|556859, gene_6038 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|556859
Unique Namegene_6038
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_14:374160..379200 +

Link to JBrowse

Properties
Property NameValue
TranscriptId556945
ProteinId556859
Product nameexpressed protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_14supercontigscaffold_14:374160..379200 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL018ncniL018Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|556859mRNA_6038-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|556859mRNA_6038Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|556859

>mRNA_6038-protein ID=mRNA_6038-protein|Name=jgi.p|Nanoce1779_2|556859|organism=Nannochloropsis oceanica|type=polypeptide|length=814bp
MTSEPHTPLLMPAAATAQPLSTAAAYCRTVPPTQASKQLFSHKNNDDDEQ
ELCSSPTLLGPAADPFLRRAWRCFRVRLAQLAYRRHLLETINTMTTTSTC
LTSPYSDHGSSNHHHRSCFGSTFSSGSKSECNRVRQTYACSHERASILEL
LRLAKKSNYFSVQCFFAHCLQVWGHRSSSAPPPILSSLSFSSSSSSPPPL
ILSIKLQSDHCPAVLDRVAQAWFLRRWLTRWRSRCQRHHLIDMALRFHHK
NLAHLALSTLFVNRRRKQYMQLEGARADAFHVRRLVAWWEPSAKERRKQQ
HQQKQQQRQKQQQQEQQRDFSVFLPDVDIMLHSNSSDGTSSWLSSPFSLS
SMPGMRIDMGICVEGTLSVPSFSAPRGSKGVENEDHPHPDESSFFLPPLP
EIRLLQHRVLAALGTNLNRHMHCTIAENLFTNHQHHRYLRRWTRRRRTHA
SIQRANFIATRAHKLHTCRRALPLLLLRTNAQRLQSTCIYTANLVWARRR
ATTALWRLSLCARQHNVHQRAIEIMLQSQRLHAVTRAMSLLYASARKVLL
HLRVFTIVHRKESCRRALRRWQRRAAAAAVGRVRQQKAVILHKSTSLQRA
LLQRWSPRVAFQQKKGRHLLSLASSHCLRRRLHVSLQKLQRFTRRAALLA
HVAGLGLHARMRRVICAWASVVRQEGELRAMGLALACRKELLLLQKVFGV
IRDLAQEQVRLRRAYNHVIRQRGERIGREVLVTWWWRARVQEYEGERFVA
FVHACLTSWMLRSQMGNGQRWACKEGAEHHDRRAKRRALIWWREGRRKSG
KRRGICTDGPEEED
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Synonyms
Publications