jgi.p|Nanoce1779_2|577545, mRNA_514 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|577545
Unique Name	mRNA_514
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	4944
Alignment location	scaffold_3:1244968..1249911 -

Link to JBrowse

Properties


Property Name	Value
TranscriptId	577631
Track	FilteredModels2
ProteinId	577545

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_3	supercontig	scaffold_3:1244968..1249911 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|577545	gene_514	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|577545	mRNA_514-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_514	CDS_514	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_3:1244968..1249911-
coding sequence from alignment at scaffold_3:1244968..1249911-

mRNA sequence

>mRNA_514 ID=mRNA_514|Name=jgi.p|Nanoce1779_2|577545|organism=Nannochloropsis oceanica|type=mRNA|length=4944bp
TTCCATCGAGAGCACGTAGAGGGACTTCGTGCTCTACTGGCGCCTGGGGG
AAAAAAGAGTGGTGGCAGCAGCAGCAGCAGTGGTGGTGACGGGAGCGGGA
GGAAAAAGCGACAACGTGTGGTAGCAGCAGCAACGGCAGCAGCGACAAAG
CATACATCAGCAGTTGAAAAGATAGATGGTCAAGAAGGAGAAAGGACACG
CGCATCACCACCACTACCATGTGTTGCGGGACAGCAAGAAAACAAGTGGG
CATCCTACCAGGGACAGCTCCTCCTTTCCCTCGACAGCTGGCTCAATGAC
GAAAAGGACAAGCACACTAGGAAAGACGTGGCACTTTCCCTGGGGCATTT
GTATCGTTTATTTGTCAGACGCCTGGCTGCGGTAGCAGTGATGTCGATGA
AGGATGATCTTCGCGTGACAAAGCAAGGACTGCAGCAGTCGCAGCAGCAG
GAAGAGGGCGGCGATGGACAAGAAGATCATGGAGCCACTGCAGCAGCAGC
AGCCGGACAGAAAAGGAGGGACATAGAGATGGCCGCTGCTGCTGCGTCCT
CCTCTTCCCTCGTCTCTCGTCCTGCCTTTGCTTTAGGCGTCAAGTTGTGG
TCTCTTTTGTGGAACGACTCCTGCAAGGAGGAGGGGCATCAGGAGGCACA
AGAGGAGGAGGAGCAGCACACATCAGCAGCGGCAACGCGGACGCACCGTC
TTGTGGCGGGACGGAGGGTGTTGGAGGCGATGCTGCAGCTGAATGTGTAC
CATTATGATTCCGATCAGTCGTCGGCTGGTCAATACAGGGCCGTCGAAGC
AATTTTTTTAGAGCTACTCAACAGTGAAGACACCAGGGAGGGATGGAACG
AAGAAGAGAGAGACACGGAGGTGACGGACATGGAAGGAGAGGAGGTCCGA
TGCTTGGCGACGCTCCTTCGGATTGACCACCGTGTCGCGGACACGTGTTT
GTCACAGCTCTTGGCACTGCTGACCCAGCGATTTGCGGTGGTGAGCAAGC
AGCCATCATTCAAGGAGGAATGGACAGAGGAAAAAAGGAATGAGCAGCAG
CGACAGCAGGTGGTTGCGTCGGCGAACAATGCCCTGCGACAGGCCTGTGC
GCGGACCGTGGCCGAGGTGATAGAGACCTATTCGCGACTCCGACAGAATG
ACGTCCTGTTTCAAGCGCTTTTATCCTTAGAAGTAGAAGTAGATGGAAAT
GCCGCTGTTACTGCGCTGGCGGGGCACCCGGAGGTGATTGCTGCTGTAGG
ACGAGCCGTGCGTGAATGTCCGCCGCCCCAGTTGGTACCGCTGTGGGATC
TGCTAGCGCCTACTTCTGTATTCTCCAACTCCAGAAAAGAGGAGGGAGAT
ATGAAGTTAGAGGAAAAGGAGACGAAAATCGTCACGCATACTGCCTTGGG
GCACCTGGGGATCCGCTCCAAGCTGTTTGGGCTCTTTGTGGACAACGTCC
GAGTCTCGCCATTAAATGCGCTGGAGCTCGGAAGACGTACCAGTGCCACC
ATGGCCCAGATGACGCAGGTGGCGCTTAAGCAGCTGCAGGAGGGGGTGAC
CGCGACGGTTGGGAAGGGAGGAAAGACGAGGAAGAAGGACAAAAAGGGAA
GGCAGGAGAAGCATACAGCAGGGACGGAAGGAGAAACTGGTGCTGGTGCT
GGTGCTGGTCCTGATCCCGCTGCTGTGGGCGTGGCGCTAGACCTGTATGC
CCGCCTCTTGGAAGTACAAGCCATGTGTAGTTTTTGGTTAGACAACAGTA
ATAGTAGCAGCAGCAGTAGCATTGGCGACAGCAGCAGCAGCATCTCAGCA
TTGGAGTTTCCGTCCGGTGCATCGTTTTTGCAGACGATCATATCCCATGC
TTCACGCTTGTCGAGTTGCAAGGGAACGCTGGACAAGGTCGTGGTCGGTC
GTCTTCGGCAGCTGCTGTTGGAGAGAGGACTGCGTGGGGTGAGTGCTACG
CCTGAGGGCATGGCGGACACGGAAGCAGAGCCGCTGGAGTTGGTGGCATT
CCTTTTCCAAGGTCACGAAAAAGACGATGACACGACAAGCGATGGTCACG
ATGCCGACGGAGGAGCACGAGAGCAGTATCACCGTCGTCTAAACCTATCT
CTTCTAGGCGCCAGCTTGCCGCTGTGGGCGTCGCACTGCAAGACGGAACA
CTTGGACTTGCTGTGGTCCGCGGTCTTTTTCGATACATTGACCGTTGTCC
GCAGCAAGAAGCCGAACATCAACCGGCCTTCCATTCGTCTTTTGACCGAT
GCCGCATTTTATGAGATTACTCCATTGGCTTACCGATGTGTCCCCTCCTG
GGCCCGTCTGATTCTGGATTGTCTAGTAGATATGAGTGGTCGAGCCTTGG
AGGCGGTGGAGGGATATGTGGAGGGAGGAGATGTAAAGTCATTATTCTGC
GCCACGGAACAGGTCTTGTCTCTGCCAACGCGGGCGGTAAGAACGCAGGG
TAAAATCAAACACAAACAAGGCCAAGCCGCTGCCGCTGCTGCTTCCAAAG
GGTCGTCATCCTCCTCTGTCTTTCAGTTGACGGCGAAAAGTGTGGGCAAG
ACTAACGAATTAGAAGAAGACAGAATGGCCCGAGCTACGCACTGCTGTCG
GCTATTAAACAGCATGCCGCCTGGATACCTTCCTACCGAACACGAACCTC
TGCGCTTCCTCCTTTCCATCTTGCTCTCTCGCGTAGTGACGTGCAACCGA
GCACATGCATCCGCGCAGACCTTGCACTTGACTTTATCTGCCTCCTCTCT
TCTCGCCCTCCAACGTGCGCCAGACGCCATCGTCCCCCTTCTTGCGACAT
CCACGTCTCTTATTGACAAATGGCTGGTTAAGCTTGTCTTGCCTGCGCGT
GTCGCCGACTCGACGTATTCCTCCTCCCCTTTCTCCGAATCCAAATACAT
TGGGCTTCAGCTTCTAGGATGCTACGTTGACCATCTTGTCAAGGACAAAG
GGGCTGAGGCTGGCATGACGGAAGAACAGCAGCAGCACTGTGTGGCACAG
CTCCTCCAGGCTTTGATGAAGCAAGGACTGCTTGCAACCTTGGAGGGTGA
CACTGCCACGACAGGTAAAGATGAGGAGGAGGACATGCGTCATGCCTTGC
GCGCAATTCGTGTGCTGGTGGCACCGTATCTTGGGAGCGACGGTCTGTCG
GCGGGTGGACGAGAAACACTTGTTGAAGTTGTCGTGAAGCAGCTAGGCCC
GGCAGTGATGCGCCGTCTCTCCTCGTCGTTGTCTTCTGAAGCTCTACGGG
CATCCGCAGCGCTGCTCGAGCTGATAGGTAGAAAGGGATATGAGAGCAAG
GAGAATGAAGGAACAAACATGCAACGAATGGCCTCGTTCCATTTACCGCA
TAACGCGGTGTCGCAAGTGCTGGCCAAGGCGACGACTAGTGCGAGAGGGC
AGGAGAAGAGGGACACGGCGGACGGAGTGATGGAATTCCTAGCGGCGTAC
CTGCAGTGGGCTGAAAGGATGGAGGAGGAAGCGGAAGAGGAAGGAATAAT
CTTGGAGGAGATGGTGCAGCTGGCGGTGCTATCATCGTCGTCTGTCTCTC
TCCAGTCGAGTGCCGACGAGGAGGATCAGCACGCCGCCTGCGTGGCCGCA
GCTATCGGCAACGCACGGGGAGGGGTAAATGTGCAGCTGCAGGCCCTTTA
TCGACTCATCCACCTCCTAGATGCAGTGAAAGTACCCTCACCCTCCTCCC
ACCCCGAAAATAATGAATCGAAGACCAGGAGAGCGGCCGAGACGTTAGCG
CGGGCCGGTCGTTTGTTCGAGGTGTTGGTGGAGCAGGGCGGGATGGGGGA
GGGGCCTGGAGCGGAAGCTGTTCGTCAGGTCGCTCAAACTTTCCTCGGGC
GCATGACGCAGCTCCTGTCCGAACTTTTTGCTCGTGTGCTGTCGTCAAGG
ACGATTGATAATAGTGATATTGGTGCAGAAACGTTGGCGGGCATATTGCG
GGGACTGAGTGTCTTGCGCCTGTACGTGCGGAAGCGCTGGCTTTTCCTTT
CGGGCGGTGGCATGCGTGTAGAAGACTTGGGCCGATTGTATGTAGCTGTC
GCCTCTCTACCTCTGGCATTGCAGGGAATGAAGGGTGAGGAACAGGTGGA
TGGGGAGCAAGTATCGCAGAGGGAGGAGGTTTTTGGGGTCGCCTGCGGCC
TCCTCTCAGCGTTGCTCAAGCACCATTCCCGCCTCGTCTACCAGTGCGCC
CCGCCATTCTTCCTCCTGACGCGCGCCTTGCTTCGTGCCCTGCTTTCGGA
GAATTCTAATGGCATGTCAGTTGGCTGGGGGCCAACGGCAGTCAAGGCTT
GGACACGATTGGCCGAGCACTTGGCGGGGCACGCGACGCCTTTGCGACGG
CATCTGATGCTGCTGCTCGTGGACTATCTACACGTGTGCCCTCACTTGCG
ACAGGAGCTTAAAGGGGAGCTGCAGCCTGCTGCATTTGCGTTGATGGACG
CGCTCTCGTCCTTTGAGGTGCAGCACATGCATGCTGCCCTTCTGGACGCG
GCGGGCCAGGCTTTGCTCAAGAAGCTCCACAGCGATTATCAACAACGCTA
CAAGTACCGGGGCAAGGTCTAAAGAGGAGCCATGGTAGGACAGACAGAGA
AGATAAATCATTTGATTATTTAGAGACTAAAATGCCTTACTTACCTACCG
TGTTGTTGTTGTTGTTGTTGCTTGCTTTTGTGTTGCTTTGCTGCGCTACG
TCACGAAGCTGATTGAGCAAGACTTACGAGTGCGTCGCTCTGCGCTGTCC
TTCCGTCCCAAATCTGTGCGACTGTCTTCCATCCATCAAAATTATGTCCC
CATCGTTGGACTGGATGGTCTTCATGTATCACCACTCAATGTCCAGAGCT
ACTGGAAAAAGGCAAAGCCCCCTAGGAAAGCCTGCACTTGCGAAAGTAAG
GACACCTTCCAAGTGCCTGCTTCAATCCACGAGAAGAAACTCTG

protein sequence of jgi.p|Nanoce1779_2|577545

>mRNA_514-protein ID=mRNA_514-protein|Name=jgi.p|Nanoce1779_2|577545|organism=Nannochloropsis oceanica|type=polypeptide|length=1394bp
MSMKDDLRVTKQGLQQSQQQEEGGDGQEDHGATAAAAAGQKRRDIEMAAA
AASSSSLVSRPAFALGVKLWSLLWNDSCKEEGHQEAQEEEEQHTSAAATR
THRLVAGRRVLEAMLQLNVYHYDSDQSSAGQYRAVEAIFLELLNSEDTRE
GWNEEERDTEVTDMEGEEVRCLATLLRIDHRVADTCLSQLLALLTQRFAV
VSKQPSFKEEWTEEKRNEQQRQQVVASANNALRQACARTVAEVIETYSRL
RQNDVLFQALLSLEVEVDGNAAVTALAGHPEVIAAVGRAVRECPPPQLVP
LWDLLAPTSVFSNSRKEEGDMKLEEKETKIVTHTALGHLGIRSKLFGLFV
DNVRVSPLNALELGRRTSATMAQMTQVALKQLQEGVTATVGKGGKTRKKD
KKGRQEKHTAGTEGETGAGAGAGPDPAAVGVALDLYARLLEVQAMCSFWL
DNSNSSSSSSIGDSSSSISALEFPSGASFLQTIISHASRLSSCKGTLDKV
VVGRLRQLLLERGLRGVSATPEGMADTEAEPLELVAFLFQGHEKDDDTTS
DGHDADGGAREQYHRRLNLSLLGASLPLWASHCKTEHLDLLWSAVFFDTL
TVVRSKKPNINRPSIRLLTDAAFYEITPLAYRCVPSWARLILDCLVDMSG
RALEAVEGYVEGGDVKSLFCATEQVLSLPTRAVRTQGKIKHKQGQAAAAA
ASKGSSSSSVFQLTAKSVGKTNELEEDRMARATHCCRLLNSMPPGYLPTE
HEPLRFLLSILLSRVVTCNRAHASAQTLHLTLSASSLLALQRAPDAIVPL
LATSTSLIDKWLVKLVLPARVADSTYSSSPFSESKYIGLQLLGCYVDHLV
KDKGAEAGMTEEQQQHCVAQLLQALMKQGLLATLEGDTATTGKDEEEDMR
HALRAIRVLVAPYLGSDGLSAGGRETLVEVVVKQLGPAVMRRLSSSLSSE
ALRASAALLELIGRKGYESKENEGTNMQRMASFHLPHNAVSQVLAKATTS
ARGQEKRDTADGVMEFLAAYLQWAERMEEEAEEEGIILEEMVQLAVLSSS
SVSLQSSADEEDQHAACVAAAIGNARGGVNVQLQALYRLIHLLDAVKVPS
PSSHPENNESKTRRAAETLARAGRLFEVLVEQGGMGEGPGAEAVRQVAQT
FLGRMTQLLSELFARVLSSRTIDNSDIGAETLAGILRGLSVLRLYVRKRW
LFLSGGGMRVEDLGRLYVAVASLPLALQGMKGEEQVDGEQVSQREEVFGV
ACGLLSALLKHHSRLVYQCAPPFFLLTRALLRALLSENSNGMSVGWGPTA
VKAWTRLAEHLAGHATPLRRHLMLLLVDYLHVCPHLRQELKGELQPAAFA
LMDALSSFEVQHMHAALLDAAGQALLKKLHSDYQQRYKYRGKV*

mRNA from alignment at scaffold_3:1244968..1249911-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_514 ID=mRNA_514|Name=jgi.p|Nanoce1779_2|577545|organism=Nannochloropsis oceanica|type=mRNA|length=4944bp|location=Sequence derived from alignment at scaffold_3:1244968..1249911- (Nannochloropsis oceanica)
TTCCATCGAGAGCACGTAGAGGGACTTCGTGCTCTACTGGCGCCTGGGGG
AAAAAAGAGTGGTGGCAGCAGCAGCAGCAGTGGTGGTGACGGGAGCGGGA
GGAAAAAGCGACAACGTGTGGTAGCAGCAGCAACGGCAGCAGCGACAAAG
CATACATCAGCAGTTGAAAAGATAGATGGTCAAGAAGGAGAAAGGACACG
CGCATCACCACCACTACCATGTGTTGCGGGACAGCAAGAAAACAAGTGGG
CATCCTACCAGGGACAGCTCCTCCTTTCCCTCGACAGCTGGCTCAATGAC
GAAAAGGACAAGCACACTAGGAAAGACGTGGCACTTTCCCTGGGGCATTT
GTATCGTTTATTTGTCAGACGCCTGGCTGCGGTAGCAGTGATGTCGATGA
AGGATGATCTTCGCGTGACAAAGCAAGGACTGCAGCAGTCGCAGCAGCAG
GAAGAGGGCGGCGATGGACAAGAAGATCATGGAGCCACTGCAGCAGCAGC
AGCCGGACAGAAAAGGAGGGACATAGAGATGGCCGCTGCTGCTGCGTCCT
CCTCTTCCCTCGTCTCTCGTCCTGCCTTTGCTTTAGGCGTCAAGTTGTGG
TCTCTTTTGTGGAACGACTCCTGCAAGGAGGAGGGGCATCAGGAGGCACA
AGAGGAGGAGGAGCAGCACACATCAGCAGCGGCAACGCGGACGCACCGTC
TTGTGGCGGGACGGAGGGTGTTGGAGGCGATGCTGCAGCTGAATGTGTAC
CATTATGATTCCGATCAGTCGTCGGCTGGTCAATACAGGGCCGTCGAAGC
AATTTTTTTAGAGCTACTCAACAGTGAAGACACCAGGGAGGGATGGAACG
AAGAAGAGAGAGACACGGAGGTGACGGACATGGAAGGAGAGGAGGTCCGA
TGCTTGGCGACGCTCCTTCGGATTGACCACCGTGTCGCGGACACGTGTTT
GTCACAGCTCTTGGCACTGCTGACCCAGCGATTTGCGGTGGTGAGCAAGC
AGCCATCATTCAAGGAGGAATGGACAGAGGAAAAAAGGAATGAGCAGCAG
CGACAGCAGGTGGTTGCGTCGGCGAACAATGCCCTGCGACAGGCCTGTGC
GCGGACCGTGGCCGAGGTGATAGAGACCTATTCGCGACTCCGACAGAATG
ACGTCCTGTTTCAAGCGCTTTTATCCTTAGAAGTAGAAGTAGATGGAAAT
GCCGCTGTTACTGCGCTGGCGGGGCACCCGGAGGTGATTGCTGCTGTAGG
ACGAGCCGTGCGTGAATGTCCGCCGCCCCAGTTGGTACCGCTGTGGGATC
TGCTAGCGCCTACTTCTGTATTCTCCAACTCCAGAAAAGAGGAGGGAGAT
ATGAAGTTAGAGGAAAAGGAGACGAAAATCGTCACGCATACTGCCTTGGG
GCACCTGGGGATCCGCTCCAAGCTGTTTGGGCTCTTTGTGGACAACGTCC
GAGTCTCGCCATTAAATGCGCTGGAGCTCGGAAGACGTACCAGTGCCACC
ATGGCCCAGATGACGCAGGTGGCGCTTAAGCAGCTGCAGGAGGGGGTGAC
CGCGACGGTTGGGAAGGGAGGAAAGACGAGGAAGAAGGACAAAAAGGGAA
GGCAGGAGAAGCATACAGCAGGGACGGAAGGAGAAACTGGTGCTGGTGCT
GGTGCTGGTCCTGATCCCGCTGCTGTGGGCGTGGCGCTAGACCTGTATGC
CCGCCTCTTGGAAGTACAAGCCATGTGTAGTTTTTGGTTAGACAACAGTA
ATAGTAGCAGCAGCAGTAGCATTGGCGACAGCAGCAGCAGCATCTCAGCA
TTGGAGTTTCCGTCCGGTGCATCGTTTTTGCAGACGATCATATCCCATGC
TTCACGCTTGTCGAGTTGCAAGGGAACGCTGGACAAGGTCGTGGTCGGTC
GTCTTCGGCAGCTGCTGTTGGAGAGAGGACTGCGTGGGGTGAGTGCTACG
CCTGAGGGCATGGCGGACACGGAAGCAGAGCCGCTGGAGTTGGTGGCATT
CCTTTTCCAAGGTCACGAAAAAGACGATGACACGACAAGCGATGGTCACG
ATGCCGACGGAGGAGCACGAGAGCAGTATCACCGTCGTCTAAACCTATCT
CTTCTAGGCGCCAGCTTGCCGCTGTGGGCGTCGCACTGCAAGACGGAACA
CTTGGACTTGCTGTGGTCCGCGGTCTTTTTCGATACATTGACCGTTGTCC
GCAGCAAGAAGCCGAACATCAACCGGCCTTCCATTCGTCTTTTGACCGAT
GCCGCATTTTATGAGATTACTCCATTGGCTTACCGATGTGTCCCCTCCTG
GGCCCGTCTGATTCTGGATTGTCTAGTAGATATGAGTGGTCGAGCCTTGG
AGGCGGTGGAGGGATATGTGGAGGGAGGAGATGTAAAGTCATTATTCTGC
GCCACGGAACAGGTCTTGTCTCTGCCAACGCGGGCGGTAAGAACGCAGGG
TAAAATCAAACACAAACAAGGCCAAGCCGCTGCCGCTGCTGCTTCCAAAG
GGTCGTCATCCTCCTCTGTCTTTCAGTTGACGGCGAAAAGTGTGGGCAAG
ACTAACGAATTAGAAGAAGACAGAATGGCCCGAGCTACGCACTGCTGTCG
GCTATTAAACAGCATGCCGCCTGGATACCTTCCTACCGAACACGAACCTC
TGCGCTTCCTCCTTTCCATCTTGCTCTCTCGCGTAGTGACGTGCAACCGA
GCACATGCATCCGCGCAGACCTTGCACTTGACTTTATCTGCCTCCTCTCT
TCTCGCCCTCCAACGTGCGCCAGACGCCATCGTCCCCCTTCTTGCGACAT
CCACGTCTCTTATTGACAAATGGCTGGTTAAGCTTGTCTTGCCTGCGCGT
GTCGCCGACTCGACGTATTCCTCCTCCCCTTTCTCCGAATCCAAATACAT
TGGGCTTCAGCTTCTAGGATGCTACGTTGACCATCTTGTCAAGGACAAAG
GGGCTGAGGCTGGCATGACGGAAGAACAGCAGCAGCACTGTGTGGCACAG
CTCCTCCAGGCTTTGATGAAGCAAGGACTGCTTGCAACCTTGGAGGGTGA
CACTGCCACGACAGGTAAAGATGAGGAGGAGGACATGCGTCATGCCTTGC
GCGCAATTCGTGTGCTGGTGGCACCGTATCTTGGGAGCGACGGTCTGTCG
GCGGGTGGACGAGAAACACTTGTTGAAGTTGTCGTGAAGCAGCTAGGCCC
GGCAGTGATGCGCCGTCTCTCCTCGTCGTTGTCTTCTGAAGCTCTACGGG
CATCCGCAGCGCTGCTCGAGCTGATAGGTAGAAAGGGATATGAGAGCAAG
GAGAATGAAGGAACAAACATGCAACGAATGGCCTCGTTCCATTTACCGCA
TAACGCGGTGTCGCAAGTGCTGGCCAAGGCGACGACTAGTGCGAGAGGGC
AGGAGAAGAGGGACACGGCGGACGGAGTGATGGAATTCCTAGCGGCGTAC
CTGCAGTGGGCTGAAAGGATGGAGGAGGAAGCGGAAGAGGAAGGAATAAT
CTTGGAGGAGATGGTGCAGCTGGCGGTGCTATCATCGTCGTCTGTCTCTC
TCCAGTCGAGTGCCGACGAGGAGGATCAGCACGCCGCCTGCGTGGCCGCA
GCTATCGGCAACGCACGGGGAGGGGTAAATGTGCAGCTGCAGGCCCTTTA
TCGACTCATCCACCTCCTAGATGCAGTGAAAGTACCCTCACCCTCCTCCC
ACCCCGAAAATAATGAATCGAAGACCAGGAGAGCGGCCGAGACGTTAGCG
CGGGCCGGTCGTTTGTTCGAGGTGTTGGTGGAGCAGGGCGGGATGGGGGA
GGGGCCTGGAGCGGAAGCTGTTCGTCAGGTCGCTCAAACTTTCCTCGGGC
GCATGACGCAGCTCCTGTCCGAACTTTTTGCTCGTGTGCTGTCGTCAAGG
ACGATTGATAATAGTGATATTGGTGCAGAAACGTTGGCGGGCATATTGCG
GGGACTGAGTGTCTTGCGCCTGTACGTGCGGAAGCGCTGGCTTTTCCTTT
CGGGCGGTGGCATGCGTGTAGAAGACTTGGGCCGATTGTATGTAGCTGTC
GCCTCTCTACCTCTGGCATTGCAGGGAATGAAGGGTGAGGAACAGGTGGA
TGGGGAGCAAGTATCGCAGAGGGAGGAGGTTTTTGGGGTCGCCTGCGGCC
TCCTCTCAGCGTTGCTCAAGCACCATTCCCGCCTCGTCTACCAGTGCGCC
CCGCCATTCTTCCTCCTGACGCGCGCCTTGCTTCGTGCCCTGCTTTCGGA
GAATTCTAATGGCATGTCAGTTGGCTGGGGGCCAACGGCAGTCAAGGCTT
GGACACGATTGGCCGAGCACTTGGCGGGGCACGCGACGCCTTTGCGACGG
CATCTGATGCTGCTGCTCGTGGACTATCTACACGTGTGCCCTCACTTGCG
ACAGGAGCTTAAAGGGGAGCTGCAGCCTGCTGCATTTGCGTTGATGGACG
CGCTCTCGTCCTTTGAGGTGCAGCACATGCATGCTGCCCTTCTGGACGCG
GCGGGCCAGGCTTTGCTCAAGAAGCTCCACAGCGATTATCAACAACGCTA
CAAGTACCGGGGCAAGGTCTAAAGAGGAGCCATGGTAGGACAGACAGAGA
AGATAAATCATTTGATTATTTAGAGACTAAAATGCCTTACTTACCTACCG
TGTTGTTGTTGTTGTTGTTGCTTGCTTTTGTGTTGCTTTGCTGCGCTACG
TCACGAAGCTGATTGAGCAAGACTTACGAGTGCGTCGCTCTGCGCTGTCC
TTCCGTCCCAAATCTGTGCGACTGTCTTCCATCCATCAAAATTATGTCCC
CATCGTTGGACTGGATGGTCTTCATGTATCACCACTCAATGTCCAGAGCT
ACTGGAAAAAGGCAAAGCCCCCTAGGAAAGCCTGCACTTGCGAAAGTAAG
GACACCTTCCAAGTGCCTGCTTCAATCCACGAGAAGAAACTCTG

Coding sequence (CDS) from alignment at scaffold_3:1244968..1249911-

>mRNA_514 ID=mRNA_514|Name=jgi.p|Nanoce1779_2|577545|organism=Nannochloropsis oceanica|type=CDS|length=4182bp|location=Sequence derived from alignment at scaffold_3:1244968..1249911- (Nannochloropsis oceanica)
ATGTCGATGAAGGATGATCTTCGCGTGACAAAGCAAGGACTGCAGCAGTC
GCAGCAGCAGGAAGAGGGCGGCGATGGACAAGAAGATCATGGAGCCACTG
CAGCAGCAGCAGCCGGACAGAAAAGGAGGGACATAGAGATGGCCGCTGCT
GCTGCGTCCTCCTCTTCCCTCGTCTCTCGTCCTGCCTTTGCTTTAGGCGT
CAAGTTGTGGTCTCTTTTGTGGAACGACTCCTGCAAGGAGGAGGGGCATC
AGGAGGCACAAGAGGAGGAGGAGCAGCACACATCAGCAGCGGCAACGCGG
ACGCACCGTCTTGTGGCGGGACGGAGGGTGTTGGAGGCGATGCTGCAGCT
GAATGTGTACCATTATGATTCCGATCAGTCGTCGGCTGGTCAATACAGGG
CCGTCGAAGCAATTTTTTTAGAGCTACTCAACAGTGAAGACACCAGGGAG
GGATGGAACGAAGAAGAGAGAGACACGGAGGTGACGGACATGGAAGGAGA
GGAGGTCCGATGCTTGGCGACGCTCCTTCGGATTGACCACCGTGTCGCGG
ACACGTGTTTGTCACAGCTCTTGGCACTGCTGACCCAGCGATTTGCGGTG
GTGAGCAAGCAGCCATCATTCAAGGAGGAATGGACAGAGGAAAAAAGGAA
TGAGCAGCAGCGACAGCAGGTGGTTGCGTCGGCGAACAATGCCCTGCGAC
AGGCCTGTGCGCGGACCGTGGCCGAGGTGATAGAGACCTATTCGCGACTC
CGACAGAATGACGTCCTGTTTCAAGCGCTTTTATCCTTAGAAGTAGAAGT
AGATGGAAATGCCGCTGTTACTGCGCTGGCGGGGCACCCGGAGGTGATTG
CTGCTGTAGGACGAGCCGTGCGTGAATGTCCGCCGCCCCAGTTGGTACCG
CTGTGGGATCTGCTAGCGCCTACTTCTGTATTCTCCAACTCCAGAAAAGA
GGAGGGAGATATGAAGTTAGAGGAAAAGGAGACGAAAATCGTCACGCATA
CTGCCTTGGGGCACCTGGGGATCCGCTCCAAGCTGTTTGGGCTCTTTGTG
GACAACGTCCGAGTCTCGCCATTAAATGCGCTGGAGCTCGGAAGACGTAC
CAGTGCCACCATGGCCCAGATGACGCAGGTGGCGCTTAAGCAGCTGCAGG
AGGGGGTGACCGCGACGGTTGGGAAGGGAGGAAAGACGAGGAAGAAGGAC
AAAAAGGGAAGGCAGGAGAAGCATACAGCAGGGACGGAAGGAGAAACTGG
TGCTGGTGCTGGTGCTGGTCCTGATCCCGCTGCTGTGGGCGTGGCGCTAG
ACCTGTATGCCCGCCTCTTGGAAGTACAAGCCATGTGTAGTTTTTGGTTA
GACAACAGTAATAGTAGCAGCAGCAGTAGCATTGGCGACAGCAGCAGCAG
CATCTCAGCATTGGAGTTTCCGTCCGGTGCATCGTTTTTGCAGACGATCA
TATCCCATGCTTCACGCTTGTCGAGTTGCAAGGGAACGCTGGACAAGGTC
GTGGTCGGTCGTCTTCGGCAGCTGCTGTTGGAGAGAGGACTGCGTGGGGT
GAGTGCTACGCCTGAGGGCATGGCGGACACGGAAGCAGAGCCGCTGGAGT
TGGTGGCATTCCTTTTCCAAGGTCACGAAAAAGACGATGACACGACAAGC
GATGGTCACGATGCCGACGGAGGAGCACGAGAGCAGTATCACCGTCGTCT
AAACCTATCTCTTCTAGGCGCCAGCTTGCCGCTGTGGGCGTCGCACTGCA
AGACGGAACACTTGGACTTGCTGTGGTCCGCGGTCTTTTTCGATACATTG
ACCGTTGTCCGCAGCAAGAAGCCGAACATCAACCGGCCTTCCATTCGTCT
TTTGACCGATGCCGCATTTTATGAGATTACTCCATTGGCTTACCGATGTG
TCCCCTCCTGGGCCCGTCTGATTCTGGATTGTCTAGTAGATATGAGTGGT
CGAGCCTTGGAGGCGGTGGAGGGATATGTGGAGGGAGGAGATGTAAAGTC
ATTATTCTGCGCCACGGAACAGGTCTTGTCTCTGCCAACGCGGGCGGTAA
GAACGCAGGGTAAAATCAAACACAAACAAGGCCAAGCCGCTGCCGCTGCT
GCTTCCAAAGGGTCGTCATCCTCCTCTGTCTTTCAGTTGACGGCGAAAAG
TGTGGGCAAGACTAACGAATTAGAAGAAGACAGAATGGCCCGAGCTACGC
ACTGCTGTCGGCTATTAAACAGCATGCCGCCTGGATACCTTCCTACCGAA
CACGAACCTCTGCGCTTCCTCCTTTCCATCTTGCTCTCTCGCGTAGTGAC
GTGCAACCGAGCACATGCATCCGCGCAGACCTTGCACTTGACTTTATCTG
CCTCCTCTCTTCTCGCCCTCCAACGTGCGCCAGACGCCATCGTCCCCCTT
CTTGCGACATCCACGTCTCTTATTGACAAATGGCTGGTTAAGCTTGTCTT
GCCTGCGCGTGTCGCCGACTCGACGTATTCCTCCTCCCCTTTCTCCGAAT
CCAAATACATTGGGCTTCAGCTTCTAGGATGCTACGTTGACCATCTTGTC
AAGGACAAAGGGGCTGAGGCTGGCATGACGGAAGAACAGCAGCAGCACTG
TGTGGCACAGCTCCTCCAGGCTTTGATGAAGCAAGGACTGCTTGCAACCT
TGGAGGGTGACACTGCCACGACAGGTAAAGATGAGGAGGAGGACATGCGT
CATGCCTTGCGCGCAATTCGTGTGCTGGTGGCACCGTATCTTGGGAGCGA
CGGTCTGTCGGCGGGTGGACGAGAAACACTTGTTGAAGTTGTCGTGAAGC
AGCTAGGCCCGGCAGTGATGCGCCGTCTCTCCTCGTCGTTGTCTTCTGAA
GCTCTACGGGCATCCGCAGCGCTGCTCGAGCTGATAGGTAGAAAGGGATA
TGAGAGCAAGGAGAATGAAGGAACAAACATGCAACGAATGGCCTCGTTCC
ATTTACCGCATAACGCGGTGTCGCAAGTGCTGGCCAAGGCGACGACTAGT
GCGAGAGGGCAGGAGAAGAGGGACACGGCGGACGGAGTGATGGAATTCCT
AGCGGCGTACCTGCAGTGGGCTGAAAGGATGGAGGAGGAAGCGGAAGAGG
AAGGAATAATCTTGGAGGAGATGGTGCAGCTGGCGGTGCTATCATCGTCG
TCTGTCTCTCTCCAGTCGAGTGCCGACGAGGAGGATCAGCACGCCGCCTG
CGTGGCCGCAGCTATCGGCAACGCACGGGGAGGGGTAAATGTGCAGCTGC
AGGCCCTTTATCGACTCATCCACCTCCTAGATGCAGTGAAAGTACCCTCA
CCCTCCTCCCACCCCGAAAATAATGAATCGAAGACCAGGAGAGCGGCCGA
GACGTTAGCGCGGGCCGGTCGTTTGTTCGAGGTGTTGGTGGAGCAGGGCG
GGATGGGGGAGGGGCCTGGAGCGGAAGCTGTTCGTCAGGTCGCTCAAACT
TTCCTCGGGCGCATGACGCAGCTCCTGTCCGAACTTTTTGCTCGTGTGCT
GTCGTCAAGGACGATTGATAATAGTGATATTGGTGCAGAAACGTTGGCGG
GCATATTGCGGGGACTGAGTGTCTTGCGCCTGTACGTGCGGAAGCGCTGG
CTTTTCCTTTCGGGCGGTGGCATGCGTGTAGAAGACTTGGGCCGATTGTA
TGTAGCTGTCGCCTCTCTACCTCTGGCATTGCAGGGAATGAAGGGTGAGG
AACAGGTGGATGGGGAGCAAGTATCGCAGAGGGAGGAGGTTTTTGGGGTC
GCCTGCGGCCTCCTCTCAGCGTTGCTCAAGCACCATTCCCGCCTCGTCTA
CCAGTGCGCCCCGCCATTCTTCCTCCTGACGCGCGCCTTGCTTCGTGCCC
TGCTTTCGGAGAATTCTAATGGCATGTCAGTTGGCTGGGGGCCAACGGCA
GTCAAGGCTTGGACACGATTGGCCGAGCACTTGGCGGGGCACGCGACGCC
TTTGCGACGGCATCTGATGCTGCTGCTCGTGGACTATCTACACGTGTGCC
CTCACTTGCGACAGGAGCTTAAAGGGGAGCTGCAGCCTGCTGCATTTGCG
TTGATGGACGCGCTCTCGTCCTTTGAGGTGCAGCACATGCATGCTGCCCT
TCTGGACGCGGCGGGCCAGGCTTTGCTCAAGAAGCTCCACAGCGATTATC
AACAACGCTACAAGTACCGGGGCAAGGTCTAA

Synonyms

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