jgi.p|Nanoce1779_2|647840, mRNA_5132 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|647840
Unique Name	mRNA_5132
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	6263
Alignment location	scaffold_12:537474..543736 -

Link to JBrowse

Properties


Property Name	Value
TranscriptId	647926
Track	FilteredModels2
ProteinId	647840

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_12	supercontig	scaffold_12:537474..543736 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|647840	gene_5132	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|647840	mRNA_5132-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_5132	CDS_5132	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_12:537474..543736-
coding sequence from alignment at scaffold_12:537474..543736-

mRNA sequence

>mRNA_5132 ID=mRNA_5132|Name=jgi.p|Nanoce1779_2|647840|organism=Nannochloropsis oceanica|type=mRNA|length=6263bp
ATAATTGGTCCATGATGCATCAGAGGCATAGAGGAGTGTGAAAGTAAGTC
ATAGTGCGCGTGTGGCGCAGTGCATTCAAAGGCATGGTTGGTACTGGTTT
GCTTGGCGCGTCGTGTTGCTTAGGGGCGGAATGGAAAGCCTCAGGGCGCC
AAACGATGCCTGCGACTTTCTTCGTTGTGCCATGGTCACTTGTGTGTATG
AACTGGGTTCCGGTGCTCGTCAGGAGCAGGGGAAATGCATGCTTGCCTAC
GGGCATGGTAATTTTTTATTTAGTGGCCGGCAAGCGTCCTTTCCCTTCCT
TCCCCGTTACTCTCACTCATGGTGCTGATGCTTGTTCTATGCGTCTCGCC
GACGCCTCCCACCCGACCTACAATCTCCGCAGGAATGAGTCGTCCACTGC
ACCAGCACCCACCGGCATCGGCGCAGGAGGTTGACACGGCCGAGCTCTAT
TTCTTGGTCGCAGACTTCTTGGCCCGTTCAACGCCTTGCCAACGCGCGGC
CTCAGTGCTGCGGGAGGAACTCACAGAGCATAGCCTGCTGGGCATGTCCT
ACGACTGGCAAGGGCACTCGCACCGGTCTACTCCCCAAGAACTAAGTCTC
AAATACCGCCACTTACCGCGAGACCAGCTGCCGCGCCTTCTCCAGGCGGC
CTTGCAGGCTAGCAGCAACAGTGGGAGTGGGGGCGGAGGAGGGACTGGGT
CTTTCGAGCAGCACCAGCACCAGCAACAGCACTTTGCCCGCTCAAGGGGT
TTGAATGCAGGTAGTGGGACGGATTTACGAGTGCCGTCGCTTTTGACTGC
ATTGCCTGGATCTGGGAAATCTCCCGAGGCGATTCAAGTGCGGTATCAGC
TCGTGAGTGCCTTGGCCCAGCTCAGCGAGGCTAGCGCTCAGCTTCGGCGG
GTTAAGATGGCCATTGCTCGTGCCGAGGAAGAGGCGGCGACAAATGCGAC
AATGAAAATGATCATTGAGATGGATAAGGATGAGAAGACGGGACACCGCC
ACCACCACCAGCAGCAGCAGCAACAGTCCCAACCATCGACACCCTCTCCA
GCAGCGCTATCCATCACACAAGCAGCTGAACCAAACGAGCCCAAGGCAGA
AGAGAAAGGGGAAGGAGGCGGAGCCACATTAGAGGGAATGTTATCAATGC
CACCTTCAGTAACAGCAGAGATTTCATCGATGCAGATGGAGGAGCAGCAA
GGCGCCAGCAGCGGTAGCAGCGGCAGCAGCAGCCAGAGCAAGGTTGGGTG
TTGGGAGGAAGAACGGCACGAGTTGCGCATGGAGGGGGATGGGGAGGTGG
ATAATGAAGAGCATAAGCAACGGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCGGCAAGTGGAGGAGCAACAGCAAGAACAACAACTTCTACCACCGGT
ACAACGACAACAAGAGCAAGAGGCCGCTCCTGTCAATGCAACTGGTGAGG
CTGTTGACACCGGCGTAAAAATAGAAGAGGATGAGGATGAGGAGAAAGAG
GAGGAGGAGGAGGAGCCTGAAATGCAGATATTGATTGACACGACGATGCC
GAGCAGCAGGAGCAGCAGTAACGAGACCGACGTGGGCGGTGCTTCTCGCG
CCAGGGCTCGACGCCAGTTGGAGGAACGAGTAATTGGGTGTCAGAGGAAG
GTGAAAGCATTGCTGGCTCGTGCCCGGGAGTTGCATGCCTTGCGGACAAG
AGAAATACATGAAGGATGTCACACCCACGCAGATGTGATCTTGCGACGAC
AGGGCCTGCCATCGGCACGGTGTGCGCAGCTGCCAAGGGAGAAGCGGCCG
TTGCCGGGGTTGTATGGCTCGAGGTTGAGGCACTTGAAGACAATAAATGG
CCACATGTTCTGTCCAGTGTATTGCTTGAAATACGACAAGAGGGGGCAGT
ACGTGGTGACGGGCGCGGACGACCAACTTGTGAAGCTGTGGAACGTACGG
ACAGGGTGCTTGATGCGGAGTCTGCGGGGCCACAGCGGGGTAATAACGGA
CTTGTGTGTATCGTCAGATAATGCCCTCCTGGCTACAAGCTCGGAGGACG
GTGTGGTGCGGATATGGAACGCGGCGGATGGCACTCCTTTGACCTTGCTC
CAGGGCCATACAGACACAATTAATTATGTTCATTTCCACCCGTATTACAA
CCTCCTCCTGACGGGGTCCGACGACGGGACAGCTCGTGCCTGGGACCTTG
GTAAAGTCAAGGAGACGACGAAAGAGGCGGTCTACCCCCTCCTTCCTCTT
GCACCTGATGCACTCCCCCCCTCTTGTGTCTTCCCGCACACTCCTCCTGT
TTTTCCTGCTACTGCTGCTGCTGCTGTCAGTGGGGGAGGGGGAGGAGGAG
AGGTGGAGCAGCGGTCGAAGGTGAAGTGTATAAGTATATGTCCTTTGGGA
GGATTCCTGGCGACAGGTGCGGAGGATGGGGTAGCACGGATCTGGTCTTT
GGCAGACGTGGAAAAAAGGGGTGGGAGGGCGGAGGAGGAGGCGCAGTTGT
TGCTTGAAGCATCGTTGGGGGTGGATGGTGAGGGAGGAGGAGGAGGGGGA
GGAGGAAGAGCAGGGGTACGCCGAGGAGCGACTGCGATGGGACCAAACGC
TTCTCCATCGCACCACCAGCAGCAGCGGCAGCAACCGCCATTGGGAGAAG
GGTTAGGTCAGTTGGTGTGTCGGTTGCAGGCCAGCAAGACGGCAGTGACA
GATGTCAATTACAGTAATCTGGGGGATCGACTGTTTACGGGCTCAATGCC
TGAGGGGGTGGTGAGAGTGTGGAGCTGGGGCCCGAATTACAGCAGTTTGA
CACATTTGGTGTTGGATCCGCAGGCAGTCGAGGGAGGCGGGGAGGGAGGA
GGTGGAGAAGGGGAGGAGGAGGGATTCGGGAGCGCAGGTGGTGGAGGAGG
TGGAGGGGCGGTGGGGAGGAGCAAGACTGGGGTGGGGGAAAGGGGAAAGA
AAGAGCTGGTGCCAACAGTCGACAATGCCTTATGGACGTGTGATGATCGA
CAGATCATCACTGCGCACAGCACCAAGCCCTCCTCCGCGTCCTCCGCCTC
GTCCTCCGCCCCTGCCGAGCCCCACCCCGACTGGAAACAGCATTTGAGAG
TGTGGGACTCTTCTACCGGACGACTCCTCCGTGTCCTTCACGGGCACCGG
CGTCAATCTACCGTGCTTGCCGTCCACCCCTTTGACCCTCGCATCGTTAT
GTCCGCGGGATACGACGGAAAGATCTGTTTGTGGGACGTGTCCGCGGTCG
GAAAATGCATGCAAAGCTTCACGAATATATTAGAATGGGGCCCCCCTGGT
AATGATTATAATTTAGGCGATGCTGTGGCTCTGGTGGATGGTCAATTTTC
CTGCGATGGGTGGGGGTTCTCTGTGGCGGATGCCTGCGGAAGGCTGTTGT
TGTTCGGGCCGGAGGAGCAGGGGAGGTACCACCGGGCGCCGTCGGAGCAG
TATTTTGTGGGGGATTATGACCAGCTTCAATGGGACGTCCATGGCAATGT
GATTGACGCCGCCCGGCAGGTCGCACCGCACTTACTCCCGAGGCGGGCCT
TGACCAACAGTGAGAGGGTAGCCTACCCGGAGCAGCCGACATGGGGCTTG
ACGGGGCCGCTGCCGGTGGGGAAGGAGGAGATGAAGGTGAGCATTGTCAA
GGCGAGGGAGAGGATGGGAGGGGTGGAGAAGTTGTTGGAAGTGCGGGCGG
CGGCAGCGGCGAAGGCGGCGGCACGGATGCCGAGCCGGACCGTGTTGTTG
GGATTGGGGGGAGGAGGCGGAGATAGACGAGGAAGGGGAGGAAGGGGGGG
AGGGAGTGAAGGAGGGAGGGCAAGGTACGGGGAAGAGTTTCAGTATGCTT
GGGGCTCGGATGGCGAGGATGAGGACGAGGTGGAGGTGGTGGGAGGGAGG
GGAGATGGGATGTCCAGAGCGGAGAGATTAAGAAGGAGGAGGGAAGGAGG
TGGGGAGGGAGGGAGGGAGGGAGTGTTGTCATTAAGGCAGAGGGATAGGC
AGAGGAGAAGGGAGGCGGCTTTACAACGACAACAGCGACGACAGCGAAGG
AGGGCGAGGGGGAGAGGTGATGATCAGGATCCCTCATCAGACGAAGATTG
GACTGAGGAAGGGCGGAGAGTGGGGGAGGAGGAGGAGGAGGAGGAGTGGG
AGGGAGGGGAGGGATGGAGTGACGAGGAGGAGGATGACGGGAATGATTCC
GATTATGGGGGGAGAGTGCGGAGGGCTGGGGGAGCTGGAAGGGGAAGACG
ACAACGAGTAAGAGCGATGGCTTTAGCAGGTTCAACGCGCGACGGAGGAG
GAGGAGGAGGAGGAGGGGAGGAGAGAGGAGCGGCGGGCAGTGGCTTTGGT
CCTATCGACCCGCGGGCGCAGGGCATTCCAGTGGAACTGGATGAATTTAT
TGAAACCATCACAGCCACTACCTTGCTTGTCGCGCCCACAGCAGCAGCAG
CTGCAACTGGTGGAGAAGAAGAAGGGGAGCCAGCAACAACCGACGGGGAA
CGAGTGGGAGGAGGAGGCGGTGGAGGAGGAGGCGGAGGAGATGAAGGAGG
AGGAGGAGAAAATGGTGCCAATGCAGCCGCAGGCATGCTTCCCGTGCTTC
CTCCCCCTCCTGTGGTCCTAACGTTGGAAGGCGCAGCTCCTAACGCTCAG
GGGGAAGTAGACCGCCGTACACTTCTGTGCTCGCTGTGTGGAAAGGGACA
CTCGCAAGGCCAACCGTTGCCCGGCCCTGTGCTAGGGAGCCATCCTCTAA
AGATGAGGGATCGGCCCGTGTGGGTGCATGACGACTGCGCCCACTGGTCC
CCCCAGACGTTCGTGGGGCAGGAGGACGGCCGGTGGTACAACATTGCTGT
GGAGGTCCGGAGGGGGAGGAGGACCAAGTGCAAAGGGTGTGGGAAGCTGG
GCGCGACGATCGGGTGTAATGTCCGGACGTGTTCCAAAAGTTATCATTAT
CCGTGTGCGGTTGCGACTGGGTGGTCGTTTACGCCGGAGCAATACTTCCA
TTGTCAGCGGCATCGGCCCGAGGGTGAGGGCGAGGGAGGGGCGGAGGCGG
GGGGGAGGAGGAGAGGGAGGGTGGGACGGAGAAGAGTTGGAGCGATGGGA
GCAGGAGCAGGAGCGGGAGGGCGAGGACGAAGGGCGTCACGGATGGCGCC
GGCGAGGGGAAGATTGAGGAGAAGGAAGAGGGATGGAGGGGTGGAGGGGG
AGGAGGACGAGGACGAGGAGGAGGAAGAAGAACAAGAAAGGGAGGAAGAG
GAGGTTGAGTACTTGGATGTTTCTGCGACGAGGGGCAGCAGTGGTTCGGG
CATAGTTTATAAAGGACAATGGTACCCCGGGGAAGGAATGGAGATGGCGA
GGGAGTGGTTGAGGGCATCGACGCAGGAGCAGGACGTGAGCGGGTTGTTG
GTGCCACAGCAGGGAGATGAGGTTATTTATTTGCCCCGGGCACATTATGA
GGCTCAGGTCCGGGTGCAGTGGAAAGAGATGGAGTTTACGAAGGCCGCAG
GTGGAGGCGGGGGAGGGGGAAAGAAAAAAGCAGGCGCCATAGCTGCAGCA
GTTGCAGGAGCAGGAGCAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGTAGGATTGTCGGTCTTGCCAGCAGCTGGAGGAGGAGCACCAG
CGTCTCTGCCCGCTTCATTTACCGGCCCGTGGGATTTCCTCCCGATTGAG
TGGTCGGCGGTGAAGTGTAGGGTAGACAGGGTCTCGTACTCATTCCCTGA
GACGGAAGAGGCCTACCTGGCCGCTCCCTCGATCGTTTGCCGTGTCTCTC
TGACCGTATTGGCGGCAGGCGAGTTTATCGAGGACATGGTGGACAGCGAG
GAGGAGGAGGAGGCCATGAAGGAGGGAGGGGGGGGGGAAACAGGCTTATG
GATGGTGGAATTTCGACCCGGTCTCGGCGGCTTGGAAGGGATGCACCCTT
GATGTGGATGTGAGGAAGGATCTGAGCAGCGACGACGCCCCGGCACCCAC
CTATTTCGTGGTGGATGCGTGTTTTAATAAGGCCATGCTGCATGGATGGG
AGCCACGGGTGAGGGTGAAGGGGCCGCAGGTGCTCTATACGAGGACGGGG
AAGAGAAAGTTTGGGTTCAGGTATGGGTCAGTGGTGTCCCTGGGCAAAAT
GATGATGAAGGAGGATGAGGAGATCCAGGCGGCGGGCTCGGAGGAAGGCG
CAGTCCAGGGGCCAGGTCCGTGGAAGTGGTTGGAGATCCGGTGGGATGAA
GAGGGGGGAGGAG

protein sequence of jgi.p|Nanoce1779_2|647840

>mRNA_5132-protein ID=mRNA_5132-protein|Name=jgi.p|Nanoce1779_2|647840|organism=Nannochloropsis oceanica|type=polypeptide|length=1878bp
MVLMLVLCVSPTPPTRPTISAGMSRPLHQHPPASAQEVDTAELYFLVADF
LARSTPCQRAASVLREELTEHSLLGMSYDWQGHSHRSTPQELSLKYRHLP
RDQLPRLLQAALQASSNSGSGGGGGTGSFEQHQHQQQHFARSRGLNAGSG
TDLRVPSLLTALPGSGKSPEAIQVRYQLVSALAQLSEASAQLRRVKMAIA
RAEEEAATNATMKMIIEMDKDEKTGHRHHHQQQQQQSQPSTPSPAALSIT
QAAEPNEPKAEEKGEGGGATLEGMLSMPPSVTAEISSMQMEEQQGASSGS
SGSSSQSKVGCWEEERHELRMEGDGEVDNEEHKQRQQQQQQQQQQRQVEE
QQQEQQLLPPVQRQQEQEAAPVNATGEAVDTGVKIEEDEDEEKEEEEEEP
EMQILIDTTMPSSRSSSNETDVGGASRARARRQLEERVIGCQRKVKALLA
RARELHALRTREIHEGCHTHADVILRRQGLPSARCAQLPREKRPLPGLYG
SRLRHLKTINGHMFCPVYCLKYDKRGQYVVTGADDQLVKLWNVRTGCLMR
SLRGHSGVITDLCVSSDNALLATSSEDGVVRIWNAADGTPLTLLQGHTDT
INYVHFHPYYNLLLTGSDDGTARAWDLGKVKETTKEAVYPLLPLAPDALP
PSCVFPHTPPVFPATAAAAVSGGGGGGEVEQRSKVKCISICPLGGFLATG
AEDGVARIWSLADVEKRGGRAEEEAQLLLEASLGVDGEGGGGGGGGRAGV
RRGATAMGPNASPSHHQQQRQQPPLGEGLGQLVCRLQASKTAVTDVNYSN
LGDRLFTGSMPEGVVRVWSWGPNYSSLTHLVLDPQAVEGGGEGGGGEGEE
EGFGSAGGGGGGGAVGRSKTGVGERGKKELVPTVDNALWTCDDRQIITAH
STKPSSASSASSSAPAEPHPDWKQHLRVWDSSTGRLLRVLHGHRRQSTVL
AVHPFDPRIVMSAGYDGKICLWDVSAVGKCMQSFTNILEWGPPGNDYNLG
DAVALVDGQFSCDGWGFSVADACGRLLLFGPEEQGRYHRAPSEQYFVGDY
DQLQWDVHGNVIDAARQVAPHLLPRRALTNSERVAYPEQPTWGLTGPLPV
GKEEMKVSIVKARERMGGVEKLLEVRAAAAAKAAARMPSRTVLLGLGGGG
GDRRGRGGRGGGSEGGRARYGEEFQYAWGSDGEDEDEVEVVGGRGDGMSR
AERLRRRREGGGEGGREGVLSLRQRDRQRRREAALQRQQRRQRRRARGRG
DDQDPSSDEDWTEEGRRVGEEEEEEEWEGGEGWSDEEEDDGNDSDYGGRV
RRAGGAGRGRRQRVRAMALAGSTRDGGGGGGGGEERGAAGSGFGPIDPRA
QGIPVELDEFIETITATTLLVAPTAAAAATGGEEEGEPATTDGERVGGGG
GGGGGGGDEGGGGENGANAAAGMLPVLPPPPVVLTLEGAAPNAQGEVDRR
TLLCSLCGKGHSQGQPLPGPVLGSHPLKMRDRPVWVHDDCAHWSPQTFVG
QEDGRWYNIAVEVRRGRRTKCKGCGKLGATIGCNVRTCSKSYHYPCAVAT
GWSFTPEQYFHCQRHRPEGEGEGGAEAGGRRRGRVGRRRVGAMGAGAGAG
GRGRRASRMAPARGRLRRRKRDGGVEGEEDEDEEEEEEQEREEEEVEYLD
VSATRGSSGSGIVYKGQWYPGEGMEMAREWLRASTQEQDVSGLLVPQQGD
EVIYLPRAHYEAQVRVQWKEMEFTKAAGGGGGGGKKKAGAIAAAVAGAGA
GGGGGGGGGGGGGVGLSVLPAAGGGAPASLPASFTGPWDFLPIEWSAVKC
RVDRVSYSFPETEEAYLAAPSIVCRVSLTVLAAGEFIEDMVDSEEEEEAM
KEGGGGETGLWMVEFRPGLGGLEGMHP*

mRNA from alignment at scaffold_12:537474..543736-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_5132 ID=mRNA_5132|Name=jgi.p|Nanoce1779_2|647840|organism=Nannochloropsis oceanica|type=mRNA|length=6263bp|location=Sequence derived from alignment at scaffold_12:537474..543736- (Nannochloropsis oceanica)
ATAATTGGTCCATGATGCATCAGAGGCATAGAGGAGTGTGAAAGTAAGTC
ATAGTGCGCGTGTGGCGCAGTGCATTCAAAGGCATGGTTGGTACTGGTTT
GCTTGGCGCGTCGTGTTGCTTAGGGGCGGAATGGAAAGCCTCAGGGCGCC
AAACGATGCCTGCGACTTTCTTCGTTGTGCCATGGTCACTTGTGTGTATG
AACTGGGTTCCGGTGCTCGTCAGGAGCAGGGGAAATGCATGCTTGCCTAC
GGGCATGGTAATTTTTTATTTAGTGGCCGGCAAGCGTCCTTTCCCTTCCT
TCCCCGTTACTCTCACTCATGGTGCTGATGCTTGTTCTATGCGTCTCGCC
GACGCCTCCCACCCGACCTACAATCTCCGCAGGAATGAGTCGTCCACTGC
ACCAGCACCCACCGGCATCGGCGCAGGAGGTTGACACGGCCGAGCTCTAT
TTCTTGGTCGCAGACTTCTTGGCCCGTTCAACGCCTTGCCAACGCGCGGC
CTCAGTGCTGCGGGAGGAACTCACAGAGCATAGCCTGCTGGGCATGTCCT
ACGACTGGCAAGGGCACTCGCACCGGTCTACTCCCCAAGAACTAAGTCTC
AAATACCGCCACTTACCGCGAGACCAGCTGCCGCGCCTTCTCCAGGCGGC
CTTGCAGGCTAGCAGCAACAGTGGGAGTGGGGGCGGAGGAGGGACTGGGT
CTTTCGAGCAGCACCAGCACCAGCAACAGCACTTTGCCCGCTCAAGGGGT
TTGAATGCAGGTAGTGGGACGGATTTACGAGTGCCGTCGCTTTTGACTGC
ATTGCCTGGATCTGGGAAATCTCCCGAGGCGATTCAAGTGCGGTATCAGC
TCGTGAGTGCCTTGGCCCAGCTCAGCGAGGCTAGCGCTCAGCTTCGGCGG
GTTAAGATGGCCATTGCTCGTGCCGAGGAAGAGGCGGCGACAAATGCGAC
AATGAAAATGATCATTGAGATGGATAAGGATGAGAAGACGGGACACCGCC
ACCACCACCAGCAGCAGCAGCAACAGTCCCAACCATCGACACCCTCTCCA
GCAGCGCTATCCATCACACAAGCAGCTGAACCAAACGAGCCCAAGGCAGA
AGAGAAAGGGGAAGGAGGCGGAGCCACATTAGAGGGAATGTTATCAATGC
CACCTTCAGTAACAGCAGAGATTTCATCGATGCAGATGGAGGAGCAGCAA
GGCGCCAGCAGCGGTAGCAGCGGCAGCAGCAGCCAGAGCAAGGTTGGGTG
TTGGGAGGAAGAACGGCACGAGTTGCGCATGGAGGGGGATGGGGAGGTGG
ATAATGAAGAGCATAAGCAACGGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAGCGGCAAGTGGAGGAGCAACAGCAAGAACAACAACTTCTACCACCGGT
ACAACGACAACAAGAGCAAGAGGCCGCTCCTGTCAATGCAACTGGTGAGG
CTGTTGACACCGGCGTAAAAATAGAAGAGGATGAGGATGAGGAGAAAGAG
GAGGAGGAGGAGGAGCCTGAAATGCAGATATTGATTGACACGACGATGCC
GAGCAGCAGGAGCAGCAGTAACGAGACCGACGTGGGCGGTGCTTCTCGCG
CCAGGGCTCGACGCCAGTTGGAGGAACGAGTAATTGGGTGTCAGAGGAAG
GTGAAAGCATTGCTGGCTCGTGCCCGGGAGTTGCATGCCTTGCGGACAAG
AGAAATACATGAAGGATGTCACACCCACGCAGATGTGATCTTGCGACGAC
AGGGCCTGCCATCGGCACGGTGTGCGCAGCTGCCAAGGGAGAAGCGGCCG
TTGCCGGGGTTGTATGGCTCGAGGTTGAGGCACTTGAAGACAATAAATGG
CCACATGTTCTGTCCAGTGTATTGCTTGAAATACGACAAGAGGGGGCAGT
ACGTGGTGACGGGCGCGGACGACCAACTTGTGAAGCTGTGGAACGTACGG
ACAGGGTGCTTGATGCGGAGTCTGCGGGGCCACAGCGGGGTAATAACGGA
CTTGTGTGTATCGTCAGATAATGCCCTCCTGGCTACAAGCTCGGAGGACG
GTGTGGTGCGGATATGGAACGCGGCGGATGGCACTCCTTTGACCTTGCTC
CAGGGCCATACAGACACAATTAATTATGTTCATTTCCACCCGTATTACAA
CCTCCTCCTGACGGGGTCCGACGACGGGACAGCTCGTGCCTGGGACCTTG
GTAAAGTCAAGGAGACGACGAAAGAGGCGGTCTACCCCCTCCTTCCTCTT
GCACCTGATGCACTCCCCCCCTCTTGTGTCTTCCCGCACACTCCTCCTGT
TTTTCCTGCTACTGCTGCTGCTGCTGTCAGTGGGGGAGGGGGAGGAGGAG
AGGTGGAGCAGCGGTCGAAGGTGAAGTGTATAAGTATATGTCCTTTGGGA
GGATTCCTGGCGACAGGTGCGGAGGATGGGGTAGCACGGATCTGGTCTTT
GGCAGACGTGGAAAAAAGGGGTGGGAGGGCGGAGGAGGAGGCGCAGTTGT
TGCTTGAAGCATCGTTGGGGGTGGATGGTGAGGGAGGAGGAGGAGGGGGA
GGAGGAAGAGCAGGGGTACGCCGAGGAGCGACTGCGATGGGACCAAACGC
TTCTCCATCGCACCACCAGCAGCAGCGGCAGCAACCGCCATTGGGAGAAG
GGTTAGGTCAGTTGGTGTGTCGGTTGCAGGCCAGCAAGACGGCAGTGACA
GATGTCAATTACAGTAATCTGGGGGATCGACTGTTTACGGGCTCAATGCC
TGAGGGGGTGGTGAGAGTGTGGAGCTGGGGCCCGAATTACAGCAGTTTGA
CACATTTGGTGTTGGATCCGCAGGCAGTCGAGGGAGGCGGGGAGGGAGGA
GGTGGAGAAGGGGAGGAGGAGGGATTCGGGAGCGCAGGTGGTGGAGGAGG
TGGAGGGGCGGTGGGGAGGAGCAAGACTGGGGTGGGGGAAAGGGGAAAGA
AAGAGCTGGTGCCAACAGTCGACAATGCCTTATGGACGTGTGATGATCGA
CAGATCATCACTGCGCACAGCACCAAGCCCTCCTCCGCGTCCTCCGCCTC
GTCCTCCGCCCCTGCCGAGCCCCACCCCGACTGGAAACAGCATTTGAGAG
TGTGGGACTCTTCTACCGGACGACTCCTCCGTGTCCTTCACGGGCACCGG
CGTCAATCTACCGTGCTTGCCGTCCACCCCTTTGACCCTCGCATCGTTAT
GTCCGCGGGATACGACGGAAAGATCTGTTTGTGGGACGTGTCCGCGGTCG
GAAAATGCATGCAAAGCTTCACGAATATATTAGAATGGGGCCCCCCTGGT
AATGATTATAATTTAGGCGATGCTGTGGCTCTGGTGGATGGTCAATTTTC
CTGCGATGGGTGGGGGTTCTCTGTGGCGGATGCCTGCGGAAGGCTGTTGT
TGTTCGGGCCGGAGGAGCAGGGGAGGTACCACCGGGCGCCGTCGGAGCAG
TATTTTGTGGGGGATTATGACCAGCTTCAATGGGACGTCCATGGCAATGT
GATTGACGCCGCCCGGCAGGTCGCACCGCACTTACTCCCGAGGCGGGCCT
TGACCAACAGTGAGAGGGTAGCCTACCCGGAGCAGCCGACATGGGGCTTG
ACGGGGCCGCTGCCGGTGGGGAAGGAGGAGATGAAGGTGAGCATTGTCAA
GGCGAGGGAGAGGATGGGAGGGGTGGAGAAGTTGTTGGAAGTGCGGGCGG
CGGCAGCGGCGAAGGCGGCGGCACGGATGCCGAGCCGGACCGTGTTGTTG
GGATTGGGGGGAGGAGGCGGAGATAGACGAGGAAGGGGAGGAAGGGGGGG
AGGGAGTGAAGGAGGGAGGGCAAGGTACGGGGAAGAGTTTCAGTATGCTT
GGGGCTCGGATGGCGAGGATGAGGACGAGGTGGAGGTGGTGGGAGGGAGG
GGAGATGGGATGTCCAGAGCGGAGAGATTAAGAAGGAGGAGGGAAGGAGG
TGGGGAGGGAGGGAGGGAGGGAGTGTTGTCATTAAGGCAGAGGGATAGGC
AGAGGAGAAGGGAGGCGGCTTTACAACGACAACAGCGACGACAGCGAAGG
AGGGCGAGGGGGAGAGGTGATGATCAGGATCCCTCATCAGACGAAGATTG
GACTGAGGAAGGGCGGAGAGTGGGGGAGGAGGAGGAGGAGGAGGAGTGGG
AGGGAGGGGAGGGATGGAGTGACGAGGAGGAGGATGACGGGAATGATTCC
GATTATGGGGGGAGAGTGCGGAGGGCTGGGGGAGCTGGAAGGGGAAGACG
ACAACGAGTAAGAGCGATGGCTTTAGCAGGTTCAACGCGCGACGGAGGAG
GAGGAGGAGGAGGAGGGGAGGAGAGAGGAGCGGCGGGCAGTGGCTTTGGT
CCTATCGACCCGCGGGCGCAGGGCATTCCAGTGGAACTGGATGAATTTAT
TGAAACCATCACAGCCACTACCTTGCTTGTCGCGCCCACAGCAGCAGCAG
CTGCAACTGGTGGAGAAGAAGAAGGGGAGCCAGCAACAACCGACGGGGAA
CGAGTGGGAGGAGGAGGCGGTGGAGGAGGAGGCGGAGGAGATGAAGGAGG
AGGAGGAGAAAATGGTGCCAATGCAGCCGCAGGCATGCTTCCCGTGCTTC
CTCCCCCTCCTGTGGTCCTAACGTTGGAAGGCGCAGCTCCTAACGCTCAG
GGGGAAGTAGACCGCCGTACACTTCTGTGCTCGCTGTGTGGAAAGGGACA
CTCGCAAGGCCAACCGTTGCCCGGCCCTGTGCTAGGGAGCCATCCTCTAA
AGATGAGGGATCGGCCCGTGTGGGTGCATGACGACTGCGCCCACTGGTCC
CCCCAGACGTTCGTGGGGCAGGAGGACGGCCGGTGGTACAACATTGCTGT
GGAGGTCCGGAGGGGGAGGAGGACCAAGTGCAAAGGGTGTGGGAAGCTGG
GCGCGACGATCGGGTGTAATGTCCGGACGTGTTCCAAAAGTTATCATTAT
CCGTGTGCGGTTGCGACTGGGTGGTCGTTTACGCCGGAGCAATACTTCCA
TTGTCAGCGGCATCGGCCCGAGGGTGAGGGCGAGGGAGGGGCGGAGGCGG
GGGGGAGGAGGAGAGGGAGGGTGGGACGGAGAAGAGTTGGAGCGATGGGA
GCAGGAGCAGGAGCGGGAGGGCGAGGACGAAGGGCGTCACGGATGGCGCC
GGCGAGGGGAAGATTGAGGAGAAGGAAGAGGGATGGAGGGGTGGAGGGGG
AGGAGGACGAGGACGAGGAGGAGGAAGAAGAACAAGAAAGGGAGGAAGAG
GAGGTTGAGTACTTGGATGTTTCTGCGACGAGGGGCAGCAGTGGTTCGGG
CATAGTTTATAAAGGACAATGGTACCCCGGGGAAGGAATGGAGATGGCGA
GGGAGTGGTTGAGGGCATCGACGCAGGAGCAGGACGTGAGCGGGTTGTTG
GTGCCACAGCAGGGAGATGAGGTTATTTATTTGCCCCGGGCACATTATGA
GGCTCAGGTCCGGGTGCAGTGGAAAGAGATGGAGTTTACGAAGGCCGCAG
GTGGAGGCGGGGGAGGGGGAAAGAAAAAAGCAGGCGCCATAGCTGCAGCA
GTTGCAGGAGCAGGAGCAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGTAGGATTGTCGGTCTTGCCAGCAGCTGGAGGAGGAGCACCAG
CGTCTCTGCCCGCTTCATTTACCGGCCCGTGGGATTTCCTCCCGATTGAG
TGGTCGGCGGTGAAGTGTAGGGTAGACAGGGTCTCGTACTCATTCCCTGA
GACGGAAGAGGCCTACCTGGCCGCTCCCTCGATCGTTTGCCGTGTCTCTC
TGACCGTATTGGCGGCAGGCGAGTTTATCGAGGACATGGTGGACAGCGAG
GAGGAGGAGGAGGCCATGAAGGAGGGAGGGGGGGGGGAAACAGGCTTATG
GATGGTGGAATTTCGACCCGGTCTCGGCGGCTTGGAAGGGATGCACCCTT
GATGTGGATGTGAGGAAGGATCTGAGCAGCGACGACGCCCCGGCACCCAC
CTATTTCGTGGTGGATGCGTGTTTTAATAAGGCCATGCTGCATGGATGGG
AGCCACGGGTGAGGGTGAAGGGGCCGCAGGTGCTCTATACGAGGACGGGG
AAGAGAAAGTTTGGGTTCAGGTATGGGTCAGTGGTGTCCCTGGGCAAAAT
GATGATGAAGGAGGATGAGGAGATCCAGGCGGCGGGCTCGGAGGAAGGCG
CAGTCCAGGGGCCAGGTCCGTGGAAGTGGTTGGAGATCCGGTGGGATGAA
GAGGGGGGAGGAG

Coding sequence (CDS) from alignment at scaffold_12:537474..543736-

>mRNA_5132 ID=mRNA_5132|Name=jgi.p|Nanoce1779_2|647840|organism=Nannochloropsis oceanica|type=CDS|length=5634bp|location=Sequence derived from alignment at scaffold_12:537474..543736- (Nannochloropsis oceanica)
ATGGTGCTGATGCTTGTTCTATGCGTCTCGCCGACGCCTCCCACCCGACC
TACAATCTCCGCAGGAATGAGTCGTCCACTGCACCAGCACCCACCGGCAT
CGGCGCAGGAGGTTGACACGGCCGAGCTCTATTTCTTGGTCGCAGACTTC
TTGGCCCGTTCAACGCCTTGCCAACGCGCGGCCTCAGTGCTGCGGGAGGA
ACTCACAGAGCATAGCCTGCTGGGCATGTCCTACGACTGGCAAGGGCACT
CGCACCGGTCTACTCCCCAAGAACTAAGTCTCAAATACCGCCACTTACCG
CGAGACCAGCTGCCGCGCCTTCTCCAGGCGGCCTTGCAGGCTAGCAGCAA
CAGTGGGAGTGGGGGCGGAGGAGGGACTGGGTCTTTCGAGCAGCACCAGC
ACCAGCAACAGCACTTTGCCCGCTCAAGGGGTTTGAATGCAGGTAGTGGG
ACGGATTTACGAGTGCCGTCGCTTTTGACTGCATTGCCTGGATCTGGGAA
ATCTCCCGAGGCGATTCAAGTGCGGTATCAGCTCGTGAGTGCCTTGGCCC
AGCTCAGCGAGGCTAGCGCTCAGCTTCGGCGGGTTAAGATGGCCATTGCT
CGTGCCGAGGAAGAGGCGGCGACAAATGCGACAATGAAAATGATCATTGA
GATGGATAAGGATGAGAAGACGGGACACCGCCACCACCACCAGCAGCAGC
AGCAACAGTCCCAACCATCGACACCCTCTCCAGCAGCGCTATCCATCACA
CAAGCAGCTGAACCAAACGAGCCCAAGGCAGAAGAGAAAGGGGAAGGAGG
CGGAGCCACATTAGAGGGAATGTTATCAATGCCACCTTCAGTAACAGCAG
AGATTTCATCGATGCAGATGGAGGAGCAGCAAGGCGCCAGCAGCGGTAGC
AGCGGCAGCAGCAGCCAGAGCAAGGTTGGGTGTTGGGAGGAAGAACGGCA
CGAGTTGCGCATGGAGGGGGATGGGGAGGTGGATAATGAAGAGCATAAGC
AACGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCAAGTGGAGGAG
CAACAGCAAGAACAACAACTTCTACCACCGGTACAACGACAACAAGAGCA
AGAGGCCGCTCCTGTCAATGCAACTGGTGAGGCTGTTGACACCGGCGTAA
AAATAGAAGAGGATGAGGATGAGGAGAAAGAGGAGGAGGAGGAGGAGCCT
GAAATGCAGATATTGATTGACACGACGATGCCGAGCAGCAGGAGCAGCAG
TAACGAGACCGACGTGGGCGGTGCTTCTCGCGCCAGGGCTCGACGCCAGT
TGGAGGAACGAGTAATTGGGTGTCAGAGGAAGGTGAAAGCATTGCTGGCT
CGTGCCCGGGAGTTGCATGCCTTGCGGACAAGAGAAATACATGAAGGATG
TCACACCCACGCAGATGTGATCTTGCGACGACAGGGCCTGCCATCGGCAC
GGTGTGCGCAGCTGCCAAGGGAGAAGCGGCCGTTGCCGGGGTTGTATGGC
TCGAGGTTGAGGCACTTGAAGACAATAAATGGCCACATGTTCTGTCCAGT
GTATTGCTTGAAATACGACAAGAGGGGGCAGTACGTGGTGACGGGCGCGG
ACGACCAACTTGTGAAGCTGTGGAACGTACGGACAGGGTGCTTGATGCGG
AGTCTGCGGGGCCACAGCGGGGTAATAACGGACTTGTGTGTATCGTCAGA
TAATGCCCTCCTGGCTACAAGCTCGGAGGACGGTGTGGTGCGGATATGGA
ACGCGGCGGATGGCACTCCTTTGACCTTGCTCCAGGGCCATACAGACACA
ATTAATTATGTTCATTTCCACCCGTATTACAACCTCCTCCTGACGGGGTC
CGACGACGGGACAGCTCGTGCCTGGGACCTTGGTAAAGTCAAGGAGACGA
CGAAAGAGGCGGTCTACCCCCTCCTTCCTCTTGCACCTGATGCACTCCCC
CCCTCTTGTGTCTTCCCGCACACTCCTCCTGTTTTTCCTGCTACTGCTGC
TGCTGCTGTCAGTGGGGGAGGGGGAGGAGGAGAGGTGGAGCAGCGGTCGA
AGGTGAAGTGTATAAGTATATGTCCTTTGGGAGGATTCCTGGCGACAGGT
GCGGAGGATGGGGTAGCACGGATCTGGTCTTTGGCAGACGTGGAAAAAAG
GGGTGGGAGGGCGGAGGAGGAGGCGCAGTTGTTGCTTGAAGCATCGTTGG
GGGTGGATGGTGAGGGAGGAGGAGGAGGGGGAGGAGGAAGAGCAGGGGTA
CGCCGAGGAGCGACTGCGATGGGACCAAACGCTTCTCCATCGCACCACCA
GCAGCAGCGGCAGCAACCGCCATTGGGAGAAGGGTTAGGTCAGTTGGTGT
GTCGGTTGCAGGCCAGCAAGACGGCAGTGACAGATGTCAATTACAGTAAT
CTGGGGGATCGACTGTTTACGGGCTCAATGCCTGAGGGGGTGGTGAGAGT
GTGGAGCTGGGGCCCGAATTACAGCAGTTTGACACATTTGGTGTTGGATC
CGCAGGCAGTCGAGGGAGGCGGGGAGGGAGGAGGTGGAGAAGGGGAGGAG
GAGGGATTCGGGAGCGCAGGTGGTGGAGGAGGTGGAGGGGCGGTGGGGAG
GAGCAAGACTGGGGTGGGGGAAAGGGGAAAGAAAGAGCTGGTGCCAACAG
TCGACAATGCCTTATGGACGTGTGATGATCGACAGATCATCACTGCGCAC
AGCACCAAGCCCTCCTCCGCGTCCTCCGCCTCGTCCTCCGCCCCTGCCGA
GCCCCACCCCGACTGGAAACAGCATTTGAGAGTGTGGGACTCTTCTACCG
GACGACTCCTCCGTGTCCTTCACGGGCACCGGCGTCAATCTACCGTGCTT
GCCGTCCACCCCTTTGACCCTCGCATCGTTATGTCCGCGGGATACGACGG
AAAGATCTGTTTGTGGGACGTGTCCGCGGTCGGAAAATGCATGCAAAGCT
TCACGAATATATTAGAATGGGGCCCCCCTGGTAATGATTATAATTTAGGC
GATGCTGTGGCTCTGGTGGATGGTCAATTTTCCTGCGATGGGTGGGGGTT
CTCTGTGGCGGATGCCTGCGGAAGGCTGTTGTTGTTCGGGCCGGAGGAGC
AGGGGAGGTACCACCGGGCGCCGTCGGAGCAGTATTTTGTGGGGGATTAT
GACCAGCTTCAATGGGACGTCCATGGCAATGTGATTGACGCCGCCCGGCA
GGTCGCACCGCACTTACTCCCGAGGCGGGCCTTGACCAACAGTGAGAGGG
TAGCCTACCCGGAGCAGCCGACATGGGGCTTGACGGGGCCGCTGCCGGTG
GGGAAGGAGGAGATGAAGGTGAGCATTGTCAAGGCGAGGGAGAGGATGGG
AGGGGTGGAGAAGTTGTTGGAAGTGCGGGCGGCGGCAGCGGCGAAGGCGG
CGGCACGGATGCCGAGCCGGACCGTGTTGTTGGGATTGGGGGGAGGAGGC
GGAGATAGACGAGGAAGGGGAGGAAGGGGGGGAGGGAGTGAAGGAGGGAG
GGCAAGGTACGGGGAAGAGTTTCAGTATGCTTGGGGCTCGGATGGCGAGG
ATGAGGACGAGGTGGAGGTGGTGGGAGGGAGGGGAGATGGGATGTCCAGA
GCGGAGAGATTAAGAAGGAGGAGGGAAGGAGGTGGGGAGGGAGGGAGGGA
GGGAGTGTTGTCATTAAGGCAGAGGGATAGGCAGAGGAGAAGGGAGGCGG
CTTTACAACGACAACAGCGACGACAGCGAAGGAGGGCGAGGGGGAGAGGT
GATGATCAGGATCCCTCATCAGACGAAGATTGGACTGAGGAAGGGCGGAG
AGTGGGGGAGGAGGAGGAGGAGGAGGAGTGGGAGGGAGGGGAGGGATGGA
GTGACGAGGAGGAGGATGACGGGAATGATTCCGATTATGGGGGGAGAGTG
CGGAGGGCTGGGGGAGCTGGAAGGGGAAGACGACAACGAGTAAGAGCGAT
GGCTTTAGCAGGTTCAACGCGCGACGGAGGAGGAGGAGGAGGAGGAGGGG
AGGAGAGAGGAGCGGCGGGCAGTGGCTTTGGTCCTATCGACCCGCGGGCG
CAGGGCATTCCAGTGGAACTGGATGAATTTATTGAAACCATCACAGCCAC
TACCTTGCTTGTCGCGCCCACAGCAGCAGCAGCTGCAACTGGTGGAGAAG
AAGAAGGGGAGCCAGCAACAACCGACGGGGAACGAGTGGGAGGAGGAGGC
GGTGGAGGAGGAGGCGGAGGAGATGAAGGAGGAGGAGGAGAAAATGGTGC
CAATGCAGCCGCAGGCATGCTTCCCGTGCTTCCTCCCCCTCCTGTGGTCC
TAACGTTGGAAGGCGCAGCTCCTAACGCTCAGGGGGAAGTAGACCGCCGT
ACACTTCTGTGCTCGCTGTGTGGAAAGGGACACTCGCAAGGCCAACCGTT
GCCCGGCCCTGTGCTAGGGAGCCATCCTCTAAAGATGAGGGATCGGCCCG
TGTGGGTGCATGACGACTGCGCCCACTGGTCCCCCCAGACGTTCGTGGGG
CAGGAGGACGGCCGGTGGTACAACATTGCTGTGGAGGTCCGGAGGGGGAG
GAGGACCAAGTGCAAAGGGTGTGGGAAGCTGGGCGCGACGATCGGGTGTA
ATGTCCGGACGTGTTCCAAAAGTTATCATTATCCGTGTGCGGTTGCGACT
GGGTGGTCGTTTACGCCGGAGCAATACTTCCATTGTCAGCGGCATCGGCC
CGAGGGTGAGGGCGAGGGAGGGGCGGAGGCGGGGGGGAGGAGGAGAGGGA
GGGTGGGACGGAGAAGAGTTGGAGCGATGGGAGCAGGAGCAGGAGCGGGA
GGGCGAGGACGAAGGGCGTCACGGATGGCGCCGGCGAGGGGAAGATTGAG
GAGAAGGAAGAGGGATGGAGGGGTGGAGGGGGAGGAGGACGAGGACGAGG
AGGAGGAAGAAGAACAAGAAAGGGAGGAAGAGGAGGTTGAGTACTTGGAT
GTTTCTGCGACGAGGGGCAGCAGTGGTTCGGGCATAGTTTATAAAGGACA
ATGGTACCCCGGGGAAGGAATGGAGATGGCGAGGGAGTGGTTGAGGGCAT
CGACGCAGGAGCAGGACGTGAGCGGGTTGTTGGTGCCACAGCAGGGAGAT
GAGGTTATTTATTTGCCCCGGGCACATTATGAGGCTCAGGTCCGGGTGCA
GTGGAAAGAGATGGAGTTTACGAAGGCCGCAGGTGGAGGCGGGGGAGGGG
GAAAGAAAAAAGCAGGCGCCATAGCTGCAGCAGTTGCAGGAGCAGGAGCA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGTAGGATTGTC
GGTCTTGCCAGCAGCTGGAGGAGGAGCACCAGCGTCTCTGCCCGCTTCAT
TTACCGGCCCGTGGGATTTCCTCCCGATTGAGTGGTCGGCGGTGAAGTGT
AGGGTAGACAGGGTCTCGTACTCATTCCCTGAGACGGAAGAGGCCTACCT
GGCCGCTCCCTCGATCGTTTGCCGTGTCTCTCTGACCGTATTGGCGGCAG
GCGAGTTTATCGAGGACATGGTGGACAGCGAGGAGGAGGAGGAGGCCATG
AAGGAGGGAGGGGGGGGGGAAACAGGCTTATGGATGGTGGAATTTCGACC
CGGTCTCGGCGGCTTGGAAGGGATGCACCCTTGA

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