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Properties
| Property Name | Value |
|---|
| TranscriptId | 591419 |
| Track | FilteredModels2 |
| ProteinId | 591333 |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_12 | supercontig | scaffold_12:414300..415593 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_5083 ID=mRNA_5083|Name=jgi.p|Nanoce1779_2|591333|organism=Nannochloropsis oceanica|type=mRNA|length=1294bp
ACAACAGGAAGCACATGTCCCTAAAGCGACGAGCCGTCCTTGCAGGACAC
ACGGACCGCGTATGGCACGTAGCATGGAGTCCGTGCGGCAAGTATTTGGC
TTCTTGCGGGGGCGACAGGGCAGTTCGCGTTTGGGGGGCGCCGACCTCGC
AGCAGGGCTCCAACGCTGACCCCGCTGCAGATGCCACTCAAGCACCAGCC
GTACCCGTGGAGTGGCGGCTTCTCGCTACGTTGGAAGATGGACAGACGCG
TACGGTACGGTGCTGTGAGTGGTCGCCGTGTGGGAGGCTGCTGGCGGCCG
TGAGCTTTGATGCCACGTGCGTTATTTGGGAGCTGCAACCGGCGGGAGGC
CGGGCGGCGGGGGAGATGGAATGGGAGCTGACGGCCTCGGTGGAAGGACA
TGAGCACGAAGCGAAATCAGTGGCATGGAATAGGGGTGGGACATTGTTGG
CGACGTGCTCCCGGGATAAAAGCGTGTGGATTTGGGAGTGTTTGCAGGAT
AATGATTTTGAGTGCTTAAGTGTGTTGCATGGGCATGAGCAGGACGTGAA
ATTCGTCAGGTTCCATCCACGGGAAGATGTGTTGTTCTCGGCCAGCTATG
ACGATACGTTGAAGGTGTGGCAAGAGGAAGATGATGATTGGGCGTGTGTT
GCTACATTAAAAGGGCATACGTCCACGGTCTGGGGGTTATCAATCGGAAG
TAGGGACGATGGTTTGGTGTCATGTAGTGATGACGGGAGCTTGATCATAT
GGAAGGCTGCAAATGGAGAGGGGAATTATGACAAATGGCGAATTGTCTCG
AAGTTGGAGGGGCAGCAGAATAAGGCGACTGTTTACAGTGTAGATTGGTC
AAGGGAGAGTGGGGCGATAGCGTCGGGGGGGGCGGATGACTCGATCAGGG
TTTTCGCTGAAGATTTGGAGCAGCCACAGGGATGGGCGTTGGACTCGCCG
AGTTTTGTGTGTGAGGCGCATGTGGAGAAGGCGCACGAAGCGGACGTAAA
TTGCGTGAGGTGGAATCCGGTAAAACCTTGGCTGTTGGCGTCGGCGGGGG
ACGACCAGGTAGTAAGTGTGTGGGAATTCAGGAGGAGTGGGGAATAGGAA
CAGCAGCTGTAGTAGCTGTGGTAGTAGTAGAAGTCACCAGTAGAAAAGTG
GGATAAACAAGTGAAAGCAGGCAAATCTTGATCGGAAGATGATGAATGTG
AGAAATCATGCAGAGGTGGATTAATCAGGAGGAAAGATTTCAATGTGTGA
ATATATGGCTTTTGAGAGCAAGGAGGGAACAGGTATGGTAGGGA back to topprotein sequence of jgi.p|Nanoce1779_2|591333 >mRNA_5083-protein ID=mRNA_5083-protein|Name=jgi.p|Nanoce1779_2|591333|organism=Nannochloropsis oceanica|type=polypeptide|length=361bp
MSLKRRAVLAGHTDRVWHVAWSPCGKYLASCGGDRAVRVWGAPTSQQGSN
ADPAADATQAPAVPVEWRLLATLEDGQTRTVRCCEWSPCGRLLAAVSFDA
TCVIWELQPAGGRAAGEMEWELTASVEGHEHEAKSVAWNRGGTLLATCSR
DKSVWIWECLQDNDFECLSVLHGHEQDVKFVRFHPREDVLFSASYDDTLK
VWQEEDDDWACVATLKGHTSTVWGLSIGSRDDGLVSCSDDGSLIIWKAAN
GEGNYDKWRIVSKLEGQQNKATVYSVDWSRESGAIASGGADDSIRVFAED
LEQPQGWALDSPSFVCEAHVEKAHEADVNCVRWNPVKPWLLASAGDDQVV
SVWEFRRSGE* back to topmRNA from alignment at scaffold_12:414300..415593- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_5083 ID=mRNA_5083|Name=jgi.p|Nanoce1779_2|591333|organism=Nannochloropsis oceanica|type=mRNA|length=1294bp|location=Sequence derived from alignment at scaffold_12:414300..415593- (Nannochloropsis oceanica)
ACAACAGGAAGCACATGTCCCTAAAGCGACGAGCCGTCCTTGCAGGACAC
ACGGACCGCGTATGGCACGTAGCATGGAGTCCGTGCGGCAAGTATTTGGC
TTCTTGCGGGGGCGACAGGGCAGTTCGCGTTTGGGGGGCGCCGACCTCGC
AGCAGGGCTCCAACGCTGACCCCGCTGCAGATGCCACTCAAGCACCAGCC
GTACCCGTGGAGTGGCGGCTTCTCGCTACGTTGGAAGATGGACAGACGCG
TACGGTACGGTGCTGTGAGTGGTCGCCGTGTGGGAGGCTGCTGGCGGCCG
TGAGCTTTGATGCCACGTGCGTTATTTGGGAGCTGCAACCGGCGGGAGGC
CGGGCGGCGGGGGAGATGGAATGGGAGCTGACGGCCTCGGTGGAAGGACA
TGAGCACGAAGCGAAATCAGTGGCATGGAATAGGGGTGGGACATTGTTGG
CGACGTGCTCCCGGGATAAAAGCGTGTGGATTTGGGAGTGTTTGCAGGAT
AATGATTTTGAGTGCTTAAGTGTGTTGCATGGGCATGAGCAGGACGTGAA
ATTCGTCAGGTTCCATCCACGGGAAGATGTGTTGTTCTCGGCCAGCTATG
ACGATACGTTGAAGGTGTGGCAAGAGGAAGATGATGATTGGGCGTGTGTT
GCTACATTAAAAGGGCATACGTCCACGGTCTGGGGGTTATCAATCGGAAG
TAGGGACGATGGTTTGGTGTCATGTAGTGATGACGGGAGCTTGATCATAT
GGAAGGCTGCAAATGGAGAGGGGAATTATGACAAATGGCGAATTGTCTCG
AAGTTGGAGGGGCAGCAGAATAAGGCGACTGTTTACAGTGTAGATTGGTC
AAGGGAGAGTGGGGCGATAGCGTCGGGGGGGGCGGATGACTCGATCAGGG
TTTTCGCTGAAGATTTGGAGCAGCCACAGGGATGGGCGTTGGACTCGCCG
AGTTTTGTGTGTGAGGCGCATGTGGAGAAGGCGCACGAAGCGGACGTAAA
TTGCGTGAGGTGGAATCCGGTAAAACCTTGGCTGTTGGCGTCGGCGGGGG
ACGACCAGGTAGTAAGTGTGTGGGAATTCAGGAGGAGTGGGGAATAGGAA
CAGCAGCTGTAGTAGCTGTGGTAGTAGTAGAAGTCACCAGTAGAAAAGTG
GGATAAACAAGTGAAAGCAGGCAAATCTTGATCGGAAGATGATGAATGTG
AGAAATCATGCAGAGGTGGATTAATCAGGAGGAAAGATTTCAATGTGTGA
ATATATGGCTTTTGAGAGCAAGGAGGGAACAGGTATGGTAGGGA back to topCoding sequence (CDS) from alignment at scaffold_12:414300..415593- >mRNA_5083 ID=mRNA_5083|Name=jgi.p|Nanoce1779_2|591333|organism=Nannochloropsis oceanica|type=CDS|length=1083bp|location=Sequence derived from alignment at scaffold_12:414300..415593- (Nannochloropsis oceanica)
ATGTCCCTAAAGCGACGAGCCGTCCTTGCAGGACACACGGACCGCGTATG
GCACGTAGCATGGAGTCCGTGCGGCAAGTATTTGGCTTCTTGCGGGGGCG
ACAGGGCAGTTCGCGTTTGGGGGGCGCCGACCTCGCAGCAGGGCTCCAAC
GCTGACCCCGCTGCAGATGCCACTCAAGCACCAGCCGTACCCGTGGAGTG
GCGGCTTCTCGCTACGTTGGAAGATGGACAGACGCGTACGGTACGGTGCT
GTGAGTGGTCGCCGTGTGGGAGGCTGCTGGCGGCCGTGAGCTTTGATGCC
ACGTGCGTTATTTGGGAGCTGCAACCGGCGGGAGGCCGGGCGGCGGGGGA
GATGGAATGGGAGCTGACGGCCTCGGTGGAAGGACATGAGCACGAAGCGA
AATCAGTGGCATGGAATAGGGGTGGGACATTGTTGGCGACGTGCTCCCGG
GATAAAAGCGTGTGGATTTGGGAGTGTTTGCAGGATAATGATTTTGAGTG
CTTAAGTGTGTTGCATGGGCATGAGCAGGACGTGAAATTCGTCAGGTTCC
ATCCACGGGAAGATGTGTTGTTCTCGGCCAGCTATGACGATACGTTGAAG
GTGTGGCAAGAGGAAGATGATGATTGGGCGTGTGTTGCTACATTAAAAGG
GCATACGTCCACGGTCTGGGGGTTATCAATCGGAAGTAGGGACGATGGTT
TGGTGTCATGTAGTGATGACGGGAGCTTGATCATATGGAAGGCTGCAAAT
GGAGAGGGGAATTATGACAAATGGCGAATTGTCTCGAAGTTGGAGGGGCA
GCAGAATAAGGCGACTGTTTACAGTGTAGATTGGTCAAGGGAGAGTGGGG
CGATAGCGTCGGGGGGGGCGGATGACTCGATCAGGGTTTTCGCTGAAGAT
TTGGAGCAGCCACAGGGATGGGCGTTGGACTCGCCGAGTTTTGTGTGTGA
GGCGCATGTGGAGAAGGCGCACGAAGCGGACGTAAATTGCGTGAGGTGGA
ATCCGGTAAAACCTTGGCTGTTGGCGTCGGCGGGGGACGACCAGGTAGTA
AGTGTGTGGGAATTCAGGAGGAGTGGGGAATAG back to top
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