jgi.p|Nanoce1779_2|541137, mRNA_4711 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|541137
Unique Name	mRNA_4711
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	4566
Alignment location	scaffold_9:455120..459685 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	541223
Track	FilteredModels2
ProteinId	541137

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_9	supercontig	scaffold_9:455120..459685 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|541137	gene_4711	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|541137	mRNA_4711-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_4711	CDS_4711	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_9:455120..459685+
coding sequence from alignment at scaffold_9:455120..459685+

mRNA sequence

>mRNA_4711 ID=mRNA_4711|Name=jgi.p|Nanoce1779_2|541137|organism=Nannochloropsis oceanica|type=mRNA|length=4566bp
TGTTGCCGTAGCAGCAGCAGAGGACAAAGAGGAGAGGGAAGAAAATAGTA
GGAGGAGAACTGCTGCTGCTGCTGCTGCTGCTGCTACGCTGCCGGGGGAA
GGGGGTGCGGACCCGGTGCGTGGATTTTTGGGGGCGTTGATTGAGCTATT
GGAGTTGGTGGAGGAAGAGCCAGGTGGTGCTTGTGTCGAGTACTTTAAGA
TCATGACGAGGTTAATCAAAGCACCAGACGCTTTGTTGGATATAGAACCA
CAGGGGGTCGCGCAGAGGCTCGCCGGGCAGATTACACATAGAAAGGTTGT
GGAAGCAACAGAAGCGGACGAGGACAAGGCGCTCCAAGGCCTGCTCACTA
CCCTTCGGGCCCTCTTAGCCTTCTTTCCCCACCGGAACAACGTGACCCGG
ACAGTTAAAGTCTCCCTGGGCAAGAGCGGCCTGCTCCGCGAGCTCTTCGA
TCGCTGTCTGTTTGCCATGCCCTCCACCGACCCTACTGCCCCTCGTTTCA
CTGAAACCCCCCCCCCCCCAAAATGCAAGCATCCTACCTCTCGAGATTTG
GCCTTGGGGTTGGTGCTTGAGTTGAGTGCGGAGTGTCCAGAAAATCTACG
GGAGGTGGTTTCTGTGTTGGAGAAACATAACCCCCTAGGCGTGTCAACAG
AAGAGAAGGAACGTCGTCGGGCCAGGGTAGCGAGAAGGAGGTCGAAGAAC
AATTCCAATCAGGGGGCGGCCTGGGGGAGGAGGAGGAGTGAGAGCGGGAG
CACGGGGGGGGCTCTGGCTCTGGGTGCGGCGAGTTCGTCGGCGGCGGCGA
GTAGTTTGCAACTTGGATTGAGTAAGAGTAGGACGGGCTACGTGGGTTTG
AAGAATCTGGGTTGTATTTGTTATATGAACAGCACATTGCAACAACTGTG
GCACGTGAAGGGGTTTAGGGAGGGGATCTTAAGTTTCGGGGGAGGGGAGG
AGGGGGAGGGGGAAGGGGGAAGGGAGGAGAGTATGATGTGGCAGTTGCAG
TGTTTGTTCGCGCATTTGCAGGAGACGGATAAGGCCTATTACAATCCGAG
GGGGTTTTGTACGGCCTTGAAAAATTGGGAGGGGGAGCCCACAGATGTCT
ACGTGCAGCAGGACGTGTCTGACTTTCTGCTCATGTTTTTTCAGCAAGTG
GAGGGAATGACGCAAGGAACGAACTGCGAGGATGTACTGAGGCGGGAGTT
TGGGGGGGTGATTGTCCATGAGTTGATCGCGGAGGGGGGCAGGTATAGTA
GCAGGGAAGAGCCGTGTTATTTCTTGTCGGTGATGGTACAGAACTTACGG
ACATTGGAGCAGGCCTTGGAGGCTTATATCGCCGAGGAAGTGCTTGGAGA
TTATACATGGGAGAGGAAGAGGGTGGTGGGGGAGCAAGGGAAAGAAGAGG
TGGTTAAGGAGGCGTTGCCCACGGTAAAGAGGGCGAGCTTGAGGGCCTTG
CCGAGGCATTTGATATTGCACTTGAAGAGGTTTGAGTTTGATTATGAGAC
GATGCAACAAATCAAAATCAATGACAGGCTGGAATTCCCTGCTGAACTCG
ACATGTTTCCCTATACACTTGAAGGACGCGTAGCAGCAGAAACAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGGAGGGGGAATAAGAGCAGGCGGAGG
AGAAGGAGGAGGGGGAATATCAACAGGTACTGCTTCTGAGGAAAGGAGGA
GTGGGGGAGGGCATCTGAGAGAGTATTATACGTATAAATTGGCGGGGGTA
GTTATTCATATGGGGACGGCGAACAGTGGGCACTACTACAGCTATATAAG
GGAAAGAGGGGGAGGGAGGGAGAGAGGGAGCGGGGGAAGGAAAAAGGCGG
GATGGTTTGAATTTAATGATACTGTCGTCTCGGAATTCGACCCGGCGGAT
TTGGAGGAAGAGTGCTTTGGGGGCCAAGAGACGGGAGGAGGAGGAGGAGG
AAGGGAGTGGACGAGAGAGAGGATTCGAAATGCTTTTCTGCTTGTTTATG
ATCGGTGTGATGTTGCGGCGGAGGAGGAGGCGCCTGCTGCTGCGGCTCAT
CGACCGGCAGTGCCACCGGGGATTCTGGAGGAGATTTTGAGGGAGAATCT
TGAATTCTGGCGGAAGACAAATATTCTAACGAGGGCCTACTTTGAGTTCA
TGGATCAACTGCTTGAGCCTTTCTATAGCCCAAATTTGCATGAGCGGGAG
AGGGAGGATGATGAGGGGGGAGGAGGGCTGTTGGAGAGGGGGCTGAGATT
GGCGACTCAGTTTATGCTAGGGACGTTGATGGACGCGAGGGATTGGGAGG
GTGTGAGGGAGTGGAATCGGAGGCTGTGCAGGGCTTATGAGAGTTGTGTC
CCCGCCTGTTTGTGGTTTGTCAGGTTGTTGAGTAGTGTGGAGGGGGAGGG
AGGGAAAGAGGGAGGGTTGTTGTGGGAGTTGCTGGTCGAGACGGAAGAGA
GGGAGGGGAGGGTGGCTGTGGTGCAGCTGATTGATCGCGTGGTGAATGTT
TTACTCGAGGAGAAAGCGGGAGAGGGTGGGAAGAAAAGAGGGAGTGAGGA
TGTATGTTTGGAGTTGTTCCAAGCGTTGCTGAACATGAGAGGGAGGGTGA
TGGGTTTGCCGAGGCAGGGGGCAGCGAAGGTGGATTGCTATTTGTTCTTG
CTAGGGCGGATGTTGGAGAGAATCGAGGGGGCGAGGGAGATGGTTTTGGA
AGGGAACAGCAGCAGCAGCAGTTGTTTGCTTGACTTGCTTCAGCTTGTGA
ATGGCGCATTGGAACTTTGGGCTCTGGGGAGGAACAACGGAGAAAATGGA
CAACATGATAATGGCTTGTTGCTTCTCGGGAACGGTGGCAATGGCAGCAG
CAGTAGCAGTAGCAGCAGCAACAGCAGTAGTAGTGTTGGGGCAGCGGTTG
GAGGGGAGGATGGGGAGGAAGGAGGAGGGAGTTTGGATGTGTCGGAAGTG
GTGCAACCGTTGTTGTCGCACCTGCTCAGGGCGTGCGTGATCGCGATGGA
GAATGGCGAGAGCCCCGTCAATCCGTCTTTGTGGTCTGCGCTTGCCTTAC
CTCCCCACCATGTCATGTCTGCGGGGGAGATGCGAGTTGTCTGCTCTATT
GATTTCTGCGCGAGGCTGATTTTGTCTGTGAGTAGCCCGGGAGCAAAGGA
GAGAATGAGGGATTTGTTTACTCACTTGCTTTGGGAGAACATAGGGAGGA
GCGATGATATGAATGCGGCGATGGGCAAGCTTCTGGAGAGTGGAGGAGGG
GGAGAAGGGGGAGAGGAGGAGGAGGGTGTGGGCGGCGTTGTGAAACCGGT
GTTTAGGAGTTTGATGCTTGTTCTGCAGGTAGGGGATTCGTTGCAGGAAA
GGAGGATTGCGGTCATGCTGACGACGGTTTTGGCAGCACTTGAAAGTCAT
GCAGAGAGGAGGAGTGAAAGGACGGTAGAAAGGGGTTTGATGATGTTGAT
GAGGGTCGCGAGGGGGAATGCATTGGTGAGGCAGTGGTTTCACGATGGGG
CGGTGGTGGAGAGTGTGGTTGCATCGCCTGAAAGAAAGGGAAAATCTCCC
AAGAGGACAGCTAGCTTTACTAGTCTGTTGACATTTGGCGCTGTGGGAGG
TGGGGGAGGAGAGAAAGGAAAAGATGGGGGGAGGATGACGGTGGATGAGG
ATGAGGATGAGGAGAAGAGGATGGTGAGTCGGGACCAGGTGCAGTGGGCA
GAAAGGTGGTTGTTGGAGCATGAGGGAGGGAGGGGAAATGGGCTTGGCAT
TCCCTTGGGTAAAGGTGGGGAGTTTTTCAATGCGGCTGCTTCTGCTTCGA
GTTGGATTGGGGGAGGAGGGAAAGGGCACCAGGCTGTGGCGGCCAACACA
GTGGGAGGACGTGGAAGAGGGAGCATGAGGACAGGGGCGTTGCTACAGCA
AAGGTTGCTGGCCGGGATCCGGAATTTGAGTCGTGGGCAGGACATGCCTT
TAAATTATGATAGTGATATGGACCCGATGGCAGTAGTGGGGAAGTGTGTG
AAGATCAAATGGAGTGGGAACGAGCATTACACGGGGAGGATTTCGCATTA
TTCGCCGAGGTCGGGGAAGCACCACGTAAGGTACGAGGATGGCGATGAGC
GCGACTATGTCCTTAGCGAACGGCAACATGTGATCGTGGATCAGTCGTCA
CCGCTGTCGTCCTTTGAGCAGGCGGATGATTGAAAGGGGCAGAAGGAGGA
GAGAAAGGACGATGTGCACAGGACAGTGCTTCATTTACCCGAAGGCATGT
CAGTGAGCGATTAGATGTCGGGAGGCAAGGAACTTAACAAAGAAAGAGAG
AAAGAGGGGACATACATCGTTAGAAAGAAATGAGGCGAACAAAGTGTACA
TATTACCGAGAGAGACGAAAAGGCGAAAAGGCGAATAGGCGAAATGTGAG
TACACTAAAGAGGCTTGGAAAAAATAGGAGCTGCAGTTTTAAGGAAAATA
GGAAGCAATCTATAGCTTCAGCGAGCGAGATTCGAAGACACGCAGGACTG
AAGAAGACTAGAACCCTTACCAAATATTTAGCAAAGAAATAACACGAGAA
ATCTCCAAGATATGTC

protein sequence of jgi.p|Nanoce1779_2|541137

>mRNA_4711-protein ID=mRNA_4711-protein|Name=jgi.p|Nanoce1779_2|541137|organism=Nannochloropsis oceanica|type=polypeptide|length=1327bp
MTRLIKAPDALLDIEPQGVAQRLAGQITHRKVVEATEADEDKALQGLLTT
LRALLAFFPHRNNVTRTVKVSLGKSGLLRELFDRCLFAMPSTDPTAPRFT
ETPPPPKCKHPTSRDLALGLVLELSAECPENLREVVSVLEKHNPLGVSTE
EKERRRARVARRRSKNNSNQGAAWGRRRSESGSTGGALALGAASSSAAAS
SLQLGLSKSRTGYVGLKNLGCICYMNSTLQQLWHVKGFREGILSFGGGEE
GEGEGGREESMMWQLQCLFAHLQETDKAYYNPRGFCTALKNWEGEPTDVY
VQQDVSDFLLMFFQQVEGMTQGTNCEDVLRREFGGVIVHELIAEGGRYSS
REEPCYFLSVMVQNLRTLEQALEAYIAEEVLGDYTWERKRVVGEQGKEEV
VKEALPTVKRASLRALPRHLILHLKRFEFDYETMQQIKINDRLEFPAELD
MFPYTLEGRVAAETAAAAAAAAAAGGGIRAGGGEGGGGISTGTASEERRS
GGGHLREYYTYKLAGVVIHMGTANSGHYYSYIRERGGGRERGSGGRKKAG
WFEFNDTVVSEFDPADLEEECFGGQETGGGGGGREWTRERIRNAFLLVYD
RCDVAAEEEAPAAAAHRPAVPPGILEEILRENLEFWRKTNILTRAYFEFM
DQLLEPFYSPNLHEREREDDEGGGGLLERGLRLATQFMLGTLMDARDWEG
VREWNRRLCRAYESCVPACLWFVRLLSSVEGEGGKEGGLLWELLVETEER
EGRVAVVQLIDRVVNVLLEEKAGEGGKKRGSEDVCLELFQALLNMRGRVM
GLPRQGAAKVDCYLFLLGRMLERIEGAREMVLEGNSSSSSCLLDLLQLVN
GALELWALGRNNGENGQHDNGLLLLGNGGNGSSSSSSSSNSSSSVGAAVG
GEDGEEGGGSLDVSEVVQPLLSHLLRACVIAMENGESPVNPSLWSALALP
PHHVMSAGEMRVVCSIDFCARLILSVSSPGAKERMRDLFTHLLWENIGRS
DDMNAAMGKLLESGGGGEGGEEEEGVGGVVKPVFRSLMLVLQVGDSLQER
RIAVMLTTVLAALESHAERRSERTVERGLMMLMRVARGNALVRQWFHDGA
VVESVVASPERKGKSPKRTASFTSLLTFGAVGGGGGEKGKDGGRMTVDED
EDEEKRMVSRDQVQWAERWLLEHEGGRGNGLGIPLGKGGEFFNAAASASS
WIGGGGKGHQAVAANTVGGRGRGSMRTGALLQQRLLAGIRNLSRGQDMPL
NYDSDMDPMAVVGKCVKIKWSGNEHYTGRISHYSPRSGKHHVRYEDGDER
DYVLSERQHVIVDQSSPLSSFEQADD*

mRNA from alignment at scaffold_9:455120..459685+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_4711 ID=mRNA_4711|Name=jgi.p|Nanoce1779_2|541137|organism=Nannochloropsis oceanica|type=mRNA|length=4566bp|location=Sequence derived from alignment at scaffold_9:455120..459685+ (Nannochloropsis oceanica)
TGTTGCCGTAGCAGCAGCAGAGGACAAAGAGGAGAGGGAAGAAAATAGTA
GGAGGAGAACTGCTGCTGCTGCTGCTGCTGCTGCTACGCTGCCGGGGGAA
GGGGGTGCGGACCCGGTGCGTGGATTTTTGGGGGCGTTGATTGAGCTATT
GGAGTTGGTGGAGGAAGAGCCAGGTGGTGCTTGTGTCGAGTACTTTAAGA
TCATGACGAGGTTAATCAAAGCACCAGACGCTTTGTTGGATATAGAACCA
CAGGGGGTCGCGCAGAGGCTCGCCGGGCAGATTACACATAGAAAGGTTGT
GGAAGCAACAGAAGCGGACGAGGACAAGGCGCTCCAAGGCCTGCTCACTA
CCCTTCGGGCCCTCTTAGCCTTCTTTCCCCACCGGAACAACGTGACCCGG
ACAGTTAAAGTCTCCCTGGGCAAGAGCGGCCTGCTCCGCGAGCTCTTCGA
TCGCTGTCTGTTTGCCATGCCCTCCACCGACCCTACTGCCCCTCGTTTCA
CTGAAACCCCCCCCCCCCCAAAATGCAAGCATCCTACCTCTCGAGATTTG
GCCTTGGGGTTGGTGCTTGAGTTGAGTGCGGAGTGTCCAGAAAATCTACG
GGAGGTGGTTTCTGTGTTGGAGAAACATAACCCCCTAGGCGTGTCAACAG
AAGAGAAGGAACGTCGTCGGGCCAGGGTAGCGAGAAGGAGGTCGAAGAAC
AATTCCAATCAGGGGGCGGCCTGGGGGAGGAGGAGGAGTGAGAGCGGGAG
CACGGGGGGGGCTCTGGCTCTGGGTGCGGCGAGTTCGTCGGCGGCGGCGA
GTAGTTTGCAACTTGGATTGAGTAAGAGTAGGACGGGCTACGTGGGTTTG
AAGAATCTGGGTTGTATTTGTTATATGAACAGCACATTGCAACAACTGTG
GCACGTGAAGGGGTTTAGGGAGGGGATCTTAAGTTTCGGGGGAGGGGAGG
AGGGGGAGGGGGAAGGGGGAAGGGAGGAGAGTATGATGTGGCAGTTGCAG
TGTTTGTTCGCGCATTTGCAGGAGACGGATAAGGCCTATTACAATCCGAG
GGGGTTTTGTACGGCCTTGAAAAATTGGGAGGGGGAGCCCACAGATGTCT
ACGTGCAGCAGGACGTGTCTGACTTTCTGCTCATGTTTTTTCAGCAAGTG
GAGGGAATGACGCAAGGAACGAACTGCGAGGATGTACTGAGGCGGGAGTT
TGGGGGGGTGATTGTCCATGAGTTGATCGCGGAGGGGGGCAGGTATAGTA
GCAGGGAAGAGCCGTGTTATTTCTTGTCGGTGATGGTACAGAACTTACGG
ACATTGGAGCAGGCCTTGGAGGCTTATATCGCCGAGGAAGTGCTTGGAGA
TTATACATGGGAGAGGAAGAGGGTGGTGGGGGAGCAAGGGAAAGAAGAGG
TGGTTAAGGAGGCGTTGCCCACGGTAAAGAGGGCGAGCTTGAGGGCCTTG
CCGAGGCATTTGATATTGCACTTGAAGAGGTTTGAGTTTGATTATGAGAC
GATGCAACAAATCAAAATCAATGACAGGCTGGAATTCCCTGCTGAACTCG
ACATGTTTCCCTATACACTTGAAGGACGCGTAGCAGCAGAAACAGCAGCA
GCAGCAGCAGCAGCAGCAGCAGCAGGAGGGGGAATAAGAGCAGGCGGAGG
AGAAGGAGGAGGGGGAATATCAACAGGTACTGCTTCTGAGGAAAGGAGGA
GTGGGGGAGGGCATCTGAGAGAGTATTATACGTATAAATTGGCGGGGGTA
GTTATTCATATGGGGACGGCGAACAGTGGGCACTACTACAGCTATATAAG
GGAAAGAGGGGGAGGGAGGGAGAGAGGGAGCGGGGGAAGGAAAAAGGCGG
GATGGTTTGAATTTAATGATACTGTCGTCTCGGAATTCGACCCGGCGGAT
TTGGAGGAAGAGTGCTTTGGGGGCCAAGAGACGGGAGGAGGAGGAGGAGG
AAGGGAGTGGACGAGAGAGAGGATTCGAAATGCTTTTCTGCTTGTTTATG
ATCGGTGTGATGTTGCGGCGGAGGAGGAGGCGCCTGCTGCTGCGGCTCAT
CGACCGGCAGTGCCACCGGGGATTCTGGAGGAGATTTTGAGGGAGAATCT
TGAATTCTGGCGGAAGACAAATATTCTAACGAGGGCCTACTTTGAGTTCA
TGGATCAACTGCTTGAGCCTTTCTATAGCCCAAATTTGCATGAGCGGGAG
AGGGAGGATGATGAGGGGGGAGGAGGGCTGTTGGAGAGGGGGCTGAGATT
GGCGACTCAGTTTATGCTAGGGACGTTGATGGACGCGAGGGATTGGGAGG
GTGTGAGGGAGTGGAATCGGAGGCTGTGCAGGGCTTATGAGAGTTGTGTC
CCCGCCTGTTTGTGGTTTGTCAGGTTGTTGAGTAGTGTGGAGGGGGAGGG
AGGGAAAGAGGGAGGGTTGTTGTGGGAGTTGCTGGTCGAGACGGAAGAGA
GGGAGGGGAGGGTGGCTGTGGTGCAGCTGATTGATCGCGTGGTGAATGTT
TTACTCGAGGAGAAAGCGGGAGAGGGTGGGAAGAAAAGAGGGAGTGAGGA
TGTATGTTTGGAGTTGTTCCAAGCGTTGCTGAACATGAGAGGGAGGGTGA
TGGGTTTGCCGAGGCAGGGGGCAGCGAAGGTGGATTGCTATTTGTTCTTG
CTAGGGCGGATGTTGGAGAGAATCGAGGGGGCGAGGGAGATGGTTTTGGA
AGGGAACAGCAGCAGCAGCAGTTGTTTGCTTGACTTGCTTCAGCTTGTGA
ATGGCGCATTGGAACTTTGGGCTCTGGGGAGGAACAACGGAGAAAATGGA
CAACATGATAATGGCTTGTTGCTTCTCGGGAACGGTGGCAATGGCAGCAG
CAGTAGCAGTAGCAGCAGCAACAGCAGTAGTAGTGTTGGGGCAGCGGTTG
GAGGGGAGGATGGGGAGGAAGGAGGAGGGAGTTTGGATGTGTCGGAAGTG
GTGCAACCGTTGTTGTCGCACCTGCTCAGGGCGTGCGTGATCGCGATGGA
GAATGGCGAGAGCCCCGTCAATCCGTCTTTGTGGTCTGCGCTTGCCTTAC
CTCCCCACCATGTCATGTCTGCGGGGGAGATGCGAGTTGTCTGCTCTATT
GATTTCTGCGCGAGGCTGATTTTGTCTGTGAGTAGCCCGGGAGCAAAGGA
GAGAATGAGGGATTTGTTTACTCACTTGCTTTGGGAGAACATAGGGAGGA
GCGATGATATGAATGCGGCGATGGGCAAGCTTCTGGAGAGTGGAGGAGGG
GGAGAAGGGGGAGAGGAGGAGGAGGGTGTGGGCGGCGTTGTGAAACCGGT
GTTTAGGAGTTTGATGCTTGTTCTGCAGGTAGGGGATTCGTTGCAGGAAA
GGAGGATTGCGGTCATGCTGACGACGGTTTTGGCAGCACTTGAAAGTCAT
GCAGAGAGGAGGAGTGAAAGGACGGTAGAAAGGGGTTTGATGATGTTGAT
GAGGGTCGCGAGGGGGAATGCATTGGTGAGGCAGTGGTTTCACGATGGGG
CGGTGGTGGAGAGTGTGGTTGCATCGCCTGAAAGAAAGGGAAAATCTCCC
AAGAGGACAGCTAGCTTTACTAGTCTGTTGACATTTGGCGCTGTGGGAGG
TGGGGGAGGAGAGAAAGGAAAAGATGGGGGGAGGATGACGGTGGATGAGG
ATGAGGATGAGGAGAAGAGGATGGTGAGTCGGGACCAGGTGCAGTGGGCA
GAAAGGTGGTTGTTGGAGCATGAGGGAGGGAGGGGAAATGGGCTTGGCAT
TCCCTTGGGTAAAGGTGGGGAGTTTTTCAATGCGGCTGCTTCTGCTTCGA
GTTGGATTGGGGGAGGAGGGAAAGGGCACCAGGCTGTGGCGGCCAACACA
GTGGGAGGACGTGGAAGAGGGAGCATGAGGACAGGGGCGTTGCTACAGCA
AAGGTTGCTGGCCGGGATCCGGAATTTGAGTCGTGGGCAGGACATGCCTT
TAAATTATGATAGTGATATGGACCCGATGGCAGTAGTGGGGAAGTGTGTG
AAGATCAAATGGAGTGGGAACGAGCATTACACGGGGAGGATTTCGCATTA
TTCGCCGAGGTCGGGGAAGCACCACGTAAGGTACGAGGATGGCGATGAGC
GCGACTATGTCCTTAGCGAACGGCAACATGTGATCGTGGATCAGTCGTCA
CCGCTGTCGTCCTTTGAGCAGGCGGATGATTGAAAGGGGCAGAAGGAGGA
GAGAAAGGACGATGTGCACAGGACAGTGCTTCATTTACCCGAAGGCATGT
CAGTGAGCGATTAGATGTCGGGAGGCAAGGAACTTAACAAAGAAAGAGAG
AAAGAGGGGACATACATCGTTAGAAAGAAATGAGGCGAACAAAGTGTACA
TATTACCGAGAGAGACGAAAAGGCGAAAAGGCGAATAGGCGAAATGTGAG
TACACTAAAGAGGCTTGGAAAAAATAGGAGCTGCAGTTTTAAGGAAAATA
GGAAGCAATCTATAGCTTCAGCGAGCGAGATTCGAAGACACGCAGGACTG
AAGAAGACTAGAACCCTTACCAAATATTTAGCAAAGAAATAACACGAGAA
ATCTCCAAGATATGTC

Coding sequence (CDS) from alignment at scaffold_9:455120..459685+

>mRNA_4711 ID=mRNA_4711|Name=jgi.p|Nanoce1779_2|541137|organism=Nannochloropsis oceanica|type=CDS|length=3981bp|location=Sequence derived from alignment at scaffold_9:455120..459685+ (Nannochloropsis oceanica)
ATGACGAGGTTAATCAAAGCACCAGACGCTTTGTTGGATATAGAACCACA
GGGGGTCGCGCAGAGGCTCGCCGGGCAGATTACACATAGAAAGGTTGTGG
AAGCAACAGAAGCGGACGAGGACAAGGCGCTCCAAGGCCTGCTCACTACC
CTTCGGGCCCTCTTAGCCTTCTTTCCCCACCGGAACAACGTGACCCGGAC
AGTTAAAGTCTCCCTGGGCAAGAGCGGCCTGCTCCGCGAGCTCTTCGATC
GCTGTCTGTTTGCCATGCCCTCCACCGACCCTACTGCCCCTCGTTTCACT
GAAACCCCCCCCCCCCCAAAATGCAAGCATCCTACCTCTCGAGATTTGGC
CTTGGGGTTGGTGCTTGAGTTGAGTGCGGAGTGTCCAGAAAATCTACGGG
AGGTGGTTTCTGTGTTGGAGAAACATAACCCCCTAGGCGTGTCAACAGAA
GAGAAGGAACGTCGTCGGGCCAGGGTAGCGAGAAGGAGGTCGAAGAACAA
TTCCAATCAGGGGGCGGCCTGGGGGAGGAGGAGGAGTGAGAGCGGGAGCA
CGGGGGGGGCTCTGGCTCTGGGTGCGGCGAGTTCGTCGGCGGCGGCGAGT
AGTTTGCAACTTGGATTGAGTAAGAGTAGGACGGGCTACGTGGGTTTGAA
GAATCTGGGTTGTATTTGTTATATGAACAGCACATTGCAACAACTGTGGC
ACGTGAAGGGGTTTAGGGAGGGGATCTTAAGTTTCGGGGGAGGGGAGGAG
GGGGAGGGGGAAGGGGGAAGGGAGGAGAGTATGATGTGGCAGTTGCAGTG
TTTGTTCGCGCATTTGCAGGAGACGGATAAGGCCTATTACAATCCGAGGG
GGTTTTGTACGGCCTTGAAAAATTGGGAGGGGGAGCCCACAGATGTCTAC
GTGCAGCAGGACGTGTCTGACTTTCTGCTCATGTTTTTTCAGCAAGTGGA
GGGAATGACGCAAGGAACGAACTGCGAGGATGTACTGAGGCGGGAGTTTG
GGGGGGTGATTGTCCATGAGTTGATCGCGGAGGGGGGCAGGTATAGTAGC
AGGGAAGAGCCGTGTTATTTCTTGTCGGTGATGGTACAGAACTTACGGAC
ATTGGAGCAGGCCTTGGAGGCTTATATCGCCGAGGAAGTGCTTGGAGATT
ATACATGGGAGAGGAAGAGGGTGGTGGGGGAGCAAGGGAAAGAAGAGGTG
GTTAAGGAGGCGTTGCCCACGGTAAAGAGGGCGAGCTTGAGGGCCTTGCC
GAGGCATTTGATATTGCACTTGAAGAGGTTTGAGTTTGATTATGAGACGA
TGCAACAAATCAAAATCAATGACAGGCTGGAATTCCCTGCTGAACTCGAC
ATGTTTCCCTATACACTTGAAGGACGCGTAGCAGCAGAAACAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGGAGGGGGAATAAGAGCAGGCGGAGGAG
AAGGAGGAGGGGGAATATCAACAGGTACTGCTTCTGAGGAAAGGAGGAGT
GGGGGAGGGCATCTGAGAGAGTATTATACGTATAAATTGGCGGGGGTAGT
TATTCATATGGGGACGGCGAACAGTGGGCACTACTACAGCTATATAAGGG
AAAGAGGGGGAGGGAGGGAGAGAGGGAGCGGGGGAAGGAAAAAGGCGGGA
TGGTTTGAATTTAATGATACTGTCGTCTCGGAATTCGACCCGGCGGATTT
GGAGGAAGAGTGCTTTGGGGGCCAAGAGACGGGAGGAGGAGGAGGAGGAA
GGGAGTGGACGAGAGAGAGGATTCGAAATGCTTTTCTGCTTGTTTATGAT
CGGTGTGATGTTGCGGCGGAGGAGGAGGCGCCTGCTGCTGCGGCTCATCG
ACCGGCAGTGCCACCGGGGATTCTGGAGGAGATTTTGAGGGAGAATCTTG
AATTCTGGCGGAAGACAAATATTCTAACGAGGGCCTACTTTGAGTTCATG
GATCAACTGCTTGAGCCTTTCTATAGCCCAAATTTGCATGAGCGGGAGAG
GGAGGATGATGAGGGGGGAGGAGGGCTGTTGGAGAGGGGGCTGAGATTGG
CGACTCAGTTTATGCTAGGGACGTTGATGGACGCGAGGGATTGGGAGGGT
GTGAGGGAGTGGAATCGGAGGCTGTGCAGGGCTTATGAGAGTTGTGTCCC
CGCCTGTTTGTGGTTTGTCAGGTTGTTGAGTAGTGTGGAGGGGGAGGGAG
GGAAAGAGGGAGGGTTGTTGTGGGAGTTGCTGGTCGAGACGGAAGAGAGG
GAGGGGAGGGTGGCTGTGGTGCAGCTGATTGATCGCGTGGTGAATGTTTT
ACTCGAGGAGAAAGCGGGAGAGGGTGGGAAGAAAAGAGGGAGTGAGGATG
TATGTTTGGAGTTGTTCCAAGCGTTGCTGAACATGAGAGGGAGGGTGATG
GGTTTGCCGAGGCAGGGGGCAGCGAAGGTGGATTGCTATTTGTTCTTGCT
AGGGCGGATGTTGGAGAGAATCGAGGGGGCGAGGGAGATGGTTTTGGAAG
GGAACAGCAGCAGCAGCAGTTGTTTGCTTGACTTGCTTCAGCTTGTGAAT
GGCGCATTGGAACTTTGGGCTCTGGGGAGGAACAACGGAGAAAATGGACA
ACATGATAATGGCTTGTTGCTTCTCGGGAACGGTGGCAATGGCAGCAGCA
GTAGCAGTAGCAGCAGCAACAGCAGTAGTAGTGTTGGGGCAGCGGTTGGA
GGGGAGGATGGGGAGGAAGGAGGAGGGAGTTTGGATGTGTCGGAAGTGGT
GCAACCGTTGTTGTCGCACCTGCTCAGGGCGTGCGTGATCGCGATGGAGA
ATGGCGAGAGCCCCGTCAATCCGTCTTTGTGGTCTGCGCTTGCCTTACCT
CCCCACCATGTCATGTCTGCGGGGGAGATGCGAGTTGTCTGCTCTATTGA
TTTCTGCGCGAGGCTGATTTTGTCTGTGAGTAGCCCGGGAGCAAAGGAGA
GAATGAGGGATTTGTTTACTCACTTGCTTTGGGAGAACATAGGGAGGAGC
GATGATATGAATGCGGCGATGGGCAAGCTTCTGGAGAGTGGAGGAGGGGG
AGAAGGGGGAGAGGAGGAGGAGGGTGTGGGCGGCGTTGTGAAACCGGTGT
TTAGGAGTTTGATGCTTGTTCTGCAGGTAGGGGATTCGTTGCAGGAAAGG
AGGATTGCGGTCATGCTGACGACGGTTTTGGCAGCACTTGAAAGTCATGC
AGAGAGGAGGAGTGAAAGGACGGTAGAAAGGGGTTTGATGATGTTGATGA
GGGTCGCGAGGGGGAATGCATTGGTGAGGCAGTGGTTTCACGATGGGGCG
GTGGTGGAGAGTGTGGTTGCATCGCCTGAAAGAAAGGGAAAATCTCCCAA
GAGGACAGCTAGCTTTACTAGTCTGTTGACATTTGGCGCTGTGGGAGGTG
GGGGAGGAGAGAAAGGAAAAGATGGGGGGAGGATGACGGTGGATGAGGAT
GAGGATGAGGAGAAGAGGATGGTGAGTCGGGACCAGGTGCAGTGGGCAGA
AAGGTGGTTGTTGGAGCATGAGGGAGGGAGGGGAAATGGGCTTGGCATTC
CCTTGGGTAAAGGTGGGGAGTTTTTCAATGCGGCTGCTTCTGCTTCGAGT
TGGATTGGGGGAGGAGGGAAAGGGCACCAGGCTGTGGCGGCCAACACAGT
GGGAGGACGTGGAAGAGGGAGCATGAGGACAGGGGCGTTGCTACAGCAAA
GGTTGCTGGCCGGGATCCGGAATTTGAGTCGTGGGCAGGACATGCCTTTA
AATTATGATAGTGATATGGACCCGATGGCAGTAGTGGGGAAGTGTGTGAA
GATCAAATGGAGTGGGAACGAGCATTACACGGGGAGGATTTCGCATTATT
CGCCGAGGTCGGGGAAGCACCACGTAAGGTACGAGGATGGCGATGAGCGC
GACTATGTCCTTAGCGAACGGCAACATGTGATCGTGGATCAGTCGTCACC
GCTGTCGTCCTTTGAGCAGGCGGATGATTGA

Synonyms

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