Properties
Property Name | Value |
TranscriptId | 18396 |
Track | FilteredModels2 |
ProteinId | 18310 |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
scaffold_10 | supercontig | scaffold_10:42399..44807 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >mRNA_4221 ID=mRNA_4221|Name=jgi.p|Nanoce1779_2|18310|organism=Nannochloropsis oceanica|type=mRNA|length=2106bp AGGCAAGACAGTCCTCTGAGTCTTTGCGCGTCGAGTCCTGCGTCCGATAC ATCTCTTTCAAAGCAAGCAAGCCACCTCCCCACCCTACTCTCTTCTCGTG TAGTGCGACAATCCCGTGCCTTGGAAGCCCCCCTTTCATTACCTCCCGGT CCAACCATGGTCGAACTAAACCGAGCTCATACCTTCGCCTCCTCTTCCTC CCTCGCTTCCTCCACCTCCTCCTCCCCCCCATCCACGCCGACCGCCCATG GGTTACGACATAATTCCTCCTCCTCATCCCTGGCGGGCTCTGCGGGCGGC CTGTCCTATGAAGACCATCTCTCCGCCTCTTCCTACCGGGCACGACCCTC CCGATTCCTGAAATTAGTGAACTGGTGGCACATGCTTTCGGTTTACTTCC CCGCTATCTTGTACGCGCTCATCGCCGTGCTTGTTGCCCAGCTATTCGTA GACGTCTCGGACCATGGACGGGAGATCAAGGAGTTTGTGCACATGGTCGA ATCCGTTAAAACCGTGGGTCTCTCCCTCCTCATGAAAGTCACCCCCCTGT TCATTCTTGGCCTGTGGTGGGTCACCAATAAACACCGCCCCATTTACCTT GTGAACTTCGCTACCTACAAGCCCCCCCAGTCGTGGAAAGTGAGCCAGTC CGACGTGATGGAGATCATGAAACGCAAAGGCTGCTTCACCGAAAAGTCGT TGGAGTTCATGGAGAGGATCCTGACCAACAGTGGCACGGGCCCTAGTACG GCCTGGCCGCCCGGGATCCTCAAGTTGTTGAGGAGGAAGATGGAGAAGGA GGAGGGGGACGAGGCGGAGGGGTTGGATGTGGATGGGGAGGACGAGGGGG AGGTGACGGCGGATCAGACGGAAGAGGGAGCGAGGGAGGAGGCAGAGGCG GTGATTTACGGGGCAGTGCAGGATGTATTGGACAAGACTGGAGTCAAGCC CAAGGAGATTGACATTCTGATCATCAATTGCTCGCTTTTTTCGCCGACCC CGAGCCTGTGTGCCATGGTGGCCCATCATTTTCAGATGCGGCAGGACGTC TTGTCCTTCAACCTAGCGGGTATGGGGTGCTCCGCCGGTCTCGTGAGCAT TGATCTGGCCAAACGACTGTTGGAATCCCGCCCAAGAAGCCGGGCTTTGG TGGTGAGCACGGAGAATTTAACACAGGCGTTCTACCACGGCAATGACCGA GCCTTTCTGTTACAGAACACCTTGTTTCGGTGCGGGGGGGCCGCGGTGTT GCTCTCGAATCGGGTCCAGGATGGCTTAAGGGCTAAGTTCAAATTGCTTC ATGTCGTCCGGTCCCAGGGCACGGACAAGCACTCGTACGACGCTGTCTAC TCCACCCAAGACGACGAGGGCGAGAAAGGTGTGCGTCTCTCGAAGGACAT TGTCAAGGTGGCCGGTCGACTGATGGAAAAGAACCTTACGGCCATCGGGC CCAAAGTACTCTCGGTGGGAGAGATGGGCAAGGCGATCTTGACCCTGGTG GCAAGGAAGGCCTGTCACGCCTTGCGTCGTTTCTTCAAGGCCCGGGGCTG GTCGACGTTGCAGCACGCGGTGCCTGAAGTGAAGGTATACACTCCCAATT TCAGCCGGTGCGTGGATTTCTATTGTCTCCATGCAGGGGGCCGGGGGGTG CTGGACGGGATCGAGAAGAACCTTCAGTTGTTACCCGAACACTTGGAGCC GTCGAGGATGACGTTGTATGATTACGGCAATACCAGCAGCTCGTCGATCT GGTACGAGATGGAGTACATCTGTGAGAAGATGGATCTGAGACGGGGGCAG CGGGTGTTGCAGGTGGCATTTGGGAGTGGATTTAAGTGCAATAGTGCCGT ATGGGTGAGCTTGCATGTGTAGACAGAAGGAAGAAAAGAGGGCTCTCTTC CCCCCCCCCCCTCCCTTAAAAGTTCGTTTCTATCAATCAGTAAGTCTTCT TGGATGTGTAATTCGGGTACGTGTCTGACGAAGGGAGGGAGGCAGAAAGG CAGGAGGGGAGGGAGGGAATGAGAGACGACTGAGGGCCATTCAGAGTATG CGTGTGAAATTGTGTGGTGCCTATGTGCATGTGCGTGTGTCTGTCTGTCT GGTTGT back to topprotein sequence of jgi.p|Nanoce1779_2|18310 >mRNA_4221-protein ID=mRNA_4221-protein|Name=jgi.p|Nanoce1779_2|18310|organism=Nannochloropsis oceanica|type=polypeptide|length=572bp MVELNRAHTFASSSSLASSTSSSPPSTPTAHGLRHNSSSSSLAGSAGGLS YEDHLSASSYRARPSRFLKLVNWWHMLSVYFPAILYALIAVLVAQLFVDV SDHGREIKEFVHMVESVKTVGLSLLMKVTPLFILGLWWVTNKHRPIYLVN FATYKPPQSWKVSQSDVMEIMKRKGCFTEKSLEFMERILTNSGTGPSTAW PPGILKLLRRKMEKEEGDEAEGLDVDGEDEGEVTADQTEEGAREEAEAVI YGAVQDVLDKTGVKPKEIDILIINCSLFSPTPSLCAMVAHHFQMRQDVLS FNLAGMGCSAGLVSIDLAKRLLESRPRSRALVVSTENLTQAFYHGNDRAF LLQNTLFRCGGAAVLLSNRVQDGLRAKFKLLHVVRSQGTDKHSYDAVYST QDDEGEKGVRLSKDIVKVAGRLMEKNLTAIGPKVLSVGEMGKAILTLVAR KACHALRRFFKARGWSTLQHAVPEVKVYTPNFSRCVDFYCLHAGGRGVLD GIEKNLQLLPEHLEPSRMTLYDYGNTSSSSIWYEMEYICEKMDLRRGQRV LQVAFGSGFKCNSAVWVSLHV* back to topmRNA from alignment at scaffold_10:42399..44807+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_4221 ID=mRNA_4221|Name=jgi.p|Nanoce1779_2|18310|organism=Nannochloropsis oceanica|type=mRNA|length=2409bp|location=Sequence derived from alignment at scaffold_10:42399..44807+ (Nannochloropsis oceanica) AGGCAAGACAGTCCTCTGAGTCTTTGCGCGTCGAGTCCTGCGTCCGATAC
ATCTCTTTCAAAGCAAGCAAGCCACCTCCCCACCCTACTCTCTTCTCGTG
TAGTGCGACAATCCCGTGCCTTGGAAGCCCCCCTTTCATTACCTCCCGGT
CCAACCATGGTCGAACTAAACCGAGCTCATACCTTCGCCTCCTCTTCCTC
CCTCGCTTCCTCCACCTCCTCCTCCCCCCCATCCACGCCGACCGCCCATG
GGTTACGACATAATTCCTCCTCCTCATCCCTGGCGGGCTCTGCGGGCGGC
CTGTCCTATGAAGACCATCTCTCCGCCTCTTCCTACCGGGCACGACCCTC
CCGATTCCTGAAATTAGTGAACTGGTGGCACATGCTTTCGGTTTACTTCC
CCGCTATCTTGTACGCGCTCATCGCCGTGCTTGTTGCCCAGCTATTCGTA
GACGTCTCGGACCATGGACGGGAGATCAAGGTGAGTCCGGGAGAGAGAAG
CAGCTGCTTTGTCATGTCTTGGTAGCAGTGCTGTCAGTGCATCTTACATC
CGAATGTGTGCTGCCTTCTCCCGTACTTTCCTCTCACCCGTCCTCCCTCC
TTTCCTTCCTCCCTCCCTCCCTCCCTTTCTGCCCTCCAGGAGTTTGTGCA
CATGGTCGAATCCGTTAAAACCGTGGGTCTCTCCCTCCTCATGAAAGTCA
CCCCCCTGTTCATTCTTGGCCTGTGGTGGGTCACCAATAAACACCGCCCC
ATTTACCTTGTGAACTTCGCTACCTACAAGCCCCCCCAGTCGTGGAAAGT
GAGCCAGTCCGACGTGATGGAGATCATGAAACGCAAAGGCTGCTTCACCG
AAAAGTCGTTGGAGTTCATGGAGAGGATCCTGACCAACAGTGGCACGGGC
CCTAGTACGGCCTGGCCGCCCGGGATCCTCAAGTTGTTGAGGAGGAAGAT
GGAGAAGGAGGAGGGGGACGAGGCGGAGGGGTTGGATGTGGATGGGGAGG
ACGAGGGGGAGGTGACGGCGGATCAGACGGAAGAGGGAGCGAGGGAGGAG
GCAGAGGCGGTGATTTACGGGGCAGTGCAGGATGTATTGGACAAGACTGG
AGTCAAGCCCAAGGAGATTGACATTCTGATCATCAATTGCTCGCTTTTTT
CGCCGACCCCGAGCCTGTGTGCCATGGTGGCCCATCATTTTCAGATGCGG
CAGGACGTCTTGTCCTTCAACCTAGCGGGTATGGGGTGCTCCGCCGGTCT
CGTGAGCATTGATCTGGCCAAACGACTGTTGGAATCCCGCCCAAGAAGCC
GGGCTTTGGTGGTGAGCACGGAGAATTTAACACAGGCGTTCTACCACGGC
AATGACCGAGCCTTTCTGTTACAGAACACCTTGTTTCGGTGCGGGGGGGC
CGCGGTGTTGCTCTCGAATCGGGTCCAGGATGGCTTAAGGGCTAAGTTCA
AATTGCTTCATGTCGTCCGGTCCCAGGTATGTACCCTCCCTCCCTCCCTC
CCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCCTCCCTCCCTCCC
TTGACAAATCAATCCCTCCCCCTTTCTCCCTCTTCCCCCCCCTCCCTTCC
TCCGTCCTCTCTCTCTCCAGGGCACGGACAAGCACTCGTACGACGCTGTC
TACTCCACCCAAGACGACGAGGGCGAGAAAGGTGTGCGTCTCTCGAAGGA
CATTGTCAAGGTGGCCGGTCGACTGATGGAAAAGAACCTTACGGCCATCG
GGCCCAAAGTACTCTCGGTGGGAGAGATGGGCAAGGCGATCTTGACCCTG
GTGGCAAGGAAGGCCTGTCACGCCTTGCGTCGTTTCTTCAAGGCCCGGGG
CTGGTCGACGTTGCAGCACGCGGTGCCTGAAGTGAAGGTATACACTCCCA
ATTTCAGCCGGTGCGTGGATTTCTATTGTCTCCATGCAGGGGGCCGGGGG
GTGCTGGACGGGATCGAGAAGAACCTTCAGTTGTTACCCGAACACTTGGA
GCCGTCGAGGATGACGTTGTATGATTACGGCAATACCAGCAGCTCGTCGA
TCTGGTACGAGATGGAGTACATCTGTGAGAAGATGGATCTGAGACGGGGG
CAGCGGGTGTTGCAGGTGGCATTTGGGAGTGGATTTAAGTGCAATAGTGC
CGTATGGGTGAGCTTGCATGTGTAGACAGAAGGAAGAAAAGAGGGCTCTC
TTCCCCCCCCCCCCTCCCTTAAAAGTTCGTTTCTATCAATCAGTAAGTCT
TCTTGGATGTGTAATTCGGGTACGTGTCTGACGAAGGGAGGGAGGCAGAA
AGGCAGGAGGGGAGGGAGGGAATGAGAGACGACTGAGGGCCATTCAGAGT
ATGCGTGTGAAATTGTGTGGTGCCTATGTGCATGTGCGTGTGTCTGTCTG
TCTGGTTGT back to topCoding sequence (CDS) from alignment at scaffold_10:42399..44807+ >mRNA_4221 ID=mRNA_4221|Name=jgi.p|Nanoce1779_2|18310|organism=Nannochloropsis oceanica|type=CDS|length=5148bp|location=Sequence derived from alignment at scaffold_10:42399..44807+ (Nannochloropsis oceanica) ATGGTCGAACTAAACCGAGCTCATACCTTCGCCTCCTCTTCCTCCCTCGC TTCCTCCACCTCCTCCTCCCCCCCATCCACGCCGACCGCCCATGGGTTAC GACATAATTCCTCCTCCTCATCCCTGGCGGGCTCTGCGGGCGGCCTGTCC TATGAAGACCATCTCTCCGCCTCTTCCTACCGGGCACGACCCTCCCGATT CCTGAAATTAGTGAACTGGTGGCACATGCTTTCGGTTTACTTCCCCGCTA TCTTGTACGCGCTCATCGCCGTGCTTGTTGCCCAGCTATTCGTAGACGTC TCGGACCATGGACGGGAGATCAAGGAGTTTGTGCACATGGTCGAATCCGT TAAAACCGTGGGTCTCTCCCTCCTCATGAAAGTCACCCCCCTGTTCATTC TTGGCCTGTGGTGGGTCACCAATAAACACCGCCCCATTTACCTTGTGAAC TTCGCTACCTACAAGCCCCCCCAGTCGTGGAAAGTGAGCCAGTCCGACGT GATGGAGATCATGAAACGCAAAGGCTGCTTCACCGAAAAGTCGTTGGAGT TCATGGAGAGGATCCTGACCAACAGTGGCACGGGCCCTAGTACGGCCTGG CCGCCCGGGATCCTCAAGTTGTTGAGGAGGAAGATGGAGAAGGAGGAGGG GGACGAGGCGGAGGGGTTGGATGTGGATGGGGAGGACGAGGGGGAGGTGA CGGCGGATCAGACGGAAGAGGGAGCGAGGGAGGAGGCAGAGGCGGTGATT TACGGGGCAGTGCAGGATGTATTGGACAAGACTGGAGTCAAGCCCAAGGA GATTGACATTCTGATCATCAATTGCTCGCTTTTTTCGCCGACCCCGAGCC TGTGTGCCATGGTGGCCCATCATTTTCAGATGCGGCAGGACGTCTTGTCC TTCAACCTAGCGGGTATGGGGTGCTCCGCCGGTCTCGTGAGCATTGATCT GGCCAAACGACTGTTGGAATCCCGCCCAAGAAGCCGGGCTTTGGTGGTGA GCACGGAGAATTTAACACAGGCGTTCTACCACGGCAATGACCGAGCCTTT CTGTTACAGAACACCTTGTTTCGGTGCGGGGGGGCCGCGGTGTTGCTCTC GAATCGGGTCCAGGATGGCTTAAGGGCTAAGTTCAAATTGCTTCATGTCG TCCGGTCCCAGGGCACGGACAAGCACTCGTACGACGCTGTCTACTCCACC CAAGACGACGAGGGCGAGAAAGGTGTGCGTCTCTCGAAGGACATTGTCAA GGTGGCCGGTCGACTGATGGAAAAGAACCTTACGGCCATCGGGCCCAAAG TACTCTCGGTGGGAGAGATGGGCAAGGCGATCTTGACCCTGGTGGCAAGG AAGGCCTGTCACGCCTTGCGTCGTTTCTTCAAGGCCCGGGGCTGGTCGAC GTTGCAGCACGCGGTGCCTGAAGTGAAGGTATACACTCCCAATTTCAGCC GGTGCGTGGATTTCTATTGTCTCCATGCAGGGGGCCGGGGGGTGCTGGAC GGGATCGAGAAGAACCTTCAGTTGTTACCCGAACACTTGGAGCCGTCGAG GATGACGTTGTATGATTACGGCAATACCAGCAGCTCGTCGATCTGGTACG AGATGGAGTACATCTGTGAGAAGATGGATCTGAGACGGGGGCAGCGGGTG TTGCAGGTGGCATTTGGGAGTGGATTTAAGTGCAATAGTGCCGTATGGGT GAGCTTGCATGTGTAGATGGTCGAACTAAACCGAGCTCATACCTTCGCCT CCTCTTCCTCCCTCGCTTCCTCCACCTCCTCCTCCCCCCCATCCACGCCG ACCGCCCATGGGTTACGACATAATTCCTCCTCCTCATCCCTGGCGGGCTC TGCGGGCGGCCTGTCCTATGAAGACCATCTCTCCGCCTCTTCCTACCGGG CACGACCCTCCCGATTCCTGAAATTAGTGAACTGGTGGCACATGCTTTCG GTTTACTTCCCCGCTATCTTGTACGCGCTCATCGCCGTGCTTGTTGCCCA GCTATTCGTAGACGTCTCGGACCATGGACGGGAGATCAAGGAGTTTGTGC ACATGGTCGAATCCGTTAAAACCGTGGGTCTCTCCCTCCTCATGAAAGTC ACCCCCCTGTTCATTCTTGGCCTGTGGTGGGTCACCAATAAACACCGCCC CATTTACCTTGTGAACTTCGCTACCTACAAGCCCCCCCAGTCGTGGAAAG TGAGCCAGTCCGACGTGATGGAGATCATGAAACGCAAAGGCTGCTTCACC GAAAAGTCGTTGGAGTTCATGGAGAGGATCCTGACCAACAGTGGCACGGG CCCTAGTACGGCCTGGCCGCCCGGGATCCTCAAGTTGTTGAGGAGGAAGA TGGAGAAGGAGGAGGGGGACGAGGCGGAGGGGTTGGATGTGGATGGGGAG GACGAGGGGGAGGTGACGGCGGATCAGACGGAAGAGGGAGCGAGGGAGGA GGCAGAGGCGGTGATTTACGGGGCAGTGCAGGATGTATTGGACAAGACTG GAGTCAAGCCCAAGGAGATTGACATTCTGATCATCAATTGCTCGCTTTTT TCGCCGACCCCGAGCCTGTGTGCCATGGTGGCCCATCATTTTCAGATGCG GCAGGACGTCTTGTCCTTCAACCTAGCGGGTATGGGGTGCTCCGCCGGTC TCGTGAGCATTGATCTGGCCAAACGACTGTTGGAATCCCGCCCAAGAAGC CGGGCTTTGGTGGTGAGCACGGAGAATTTAACACAGGCGTTCTACCACGG CAATGACCGAGCCTTTCTGTTACAGAACACCTTGTTTCGGTGCGGGGGGG CCGCGGTGTTGCTCTCGAATCGGGTCCAGGATGGCTTAAGGGCTAAGTTC AAATTGCTTCATGTCGTCCGGTCCCAGGGCACGGACAAGCACTCGTACGA CGCTGTCTACTCCACCCAAGACGACGAGGGCGAGAAAGGTGTGCGTCTCT CGAAGGACATTGTCAAGGTGGCCGGTCGACTGATGGAAAAGAACCTTACG GCCATCGGGCCCAAAGTACTCTCGGTGGGAGAGATGGGCAAGGCGATCTT GACCCTGGTGGCAAGGAAGGCCTGTCACGCCTTGCGTCGTTTCTTCAAGG CCCGGGGCTGGTCGACGTTGCAGCACGCGGTGCCTGAAGTGAAGGTATAC ACTCCCAATTTCAGCCGGTGCGTGGATTTCTATTGTCTCCATGCAGGGGG CCGGGGGGTGCTGGACGGGATCGAGAAGAACCTTCAGTTGTTACCCGAAC ACTTGGAGCCGTCGAGGATGACGTTGTATGATTACGGCAATACCAGCAGC TCGTCGATCTGGTACGAGATGGAGTACATCTGTGAGAAGATGGATCTGAG ACGGGGGCAGCGGGTGTTGCAGGTGGCATTTGGGAGTGGATTTAAGTGCA ATAGTGCCGTATGGGTGAGCTTGCATGTGTAGATGGTCGAACTAAACCGA GCTCATACCTTCGCCTCCTCTTCCTCCCTCGCTTCCTCCACCTCCTCCTC CCCCCCATCCACGCCGACCGCCCATGGGTTACGACATAATTCCTCCTCCT CATCCCTGGCGGGCTCTGCGGGCGGCCTGTCCTATGAAGACCATCTCTCC GCCTCTTCCTACCGGGCACGACCCTCCCGATTCCTGAAATTAGTGAACTG GTGGCACATGCTTTCGGTTTACTTCCCCGCTATCTTGTACGCGCTCATCG CCGTGCTTGTTGCCCAGCTATTCGTAGACGTCTCGGACCATGGACGGGAG ATCAAGGAGTTTGTGCACATGGTCGAATCCGTTAAAACCGTGGGTCTCTC CCTCCTCATGAAAGTCACCCCCCTGTTCATTCTTGGCCTGTGGTGGGTCA CCAATAAACACCGCCCCATTTACCTTGTGAACTTCGCTACCTACAAGCCC CCCCAGTCGTGGAAAGTGAGCCAGTCCGACGTGATGGAGATCATGAAACG CAAAGGCTGCTTCACCGAAAAGTCGTTGGAGTTCATGGAGAGGATCCTGA CCAACAGTGGCACGGGCCCTAGTACGGCCTGGCCGCCCGGGATCCTCAAG TTGTTGAGGAGGAAGATGGAGAAGGAGGAGGGGGACGAGGCGGAGGGGTT GGATGTGGATGGGGAGGACGAGGGGGAGGTGACGGCGGATCAGACGGAAG AGGGAGCGAGGGAGGAGGCAGAGGCGGTGATTTACGGGGCAGTGCAGGAT GTATTGGACAAGACTGGAGTCAAGCCCAAGGAGATTGACATTCTGATCAT CAATTGCTCGCTTTTTTCGCCGACCCCGAGCCTGTGTGCCATGGTGGCCC ATCATTTTCAGATGCGGCAGGACGTCTTGTCCTTCAACCTAGCGGGTATG GGGTGCTCCGCCGGTCTCGTGAGCATTGATCTGGCCAAACGACTGTTGGA ATCCCGCCCAAGAAGCCGGGCTTTGGTGGTGAGCACGGAGAATTTAACAC AGGCGTTCTACCACGGCAATGACCGAGCCTTTCTGTTACAGAACACCTTG TTTCGGTGCGGGGGGGCCGCGGTGTTGCTCTCGAATCGGGTCCAGGATGG CTTAAGGGCTAAGTTCAAATTGCTTCATGTCGTCCGGTCCCAGGGCACGG ACAAGCACTCGTACGACGCTGTCTACTCCACCCAAGACGACGAGGGCGAG AAAGGTGTGCGTCTCTCGAAGGACATTGTCAAGGTGGCCGGTCGACTGAT GGAAAAGAACCTTACGGCCATCGGGCCCAAAGTACTCTCGGTGGGAGAGA TGGGCAAGGCGATCTTGACCCTGGTGGCAAGGAAGGCCTGTCACGCCTTG CGTCGTTTCTTCAAGGCCCGGGGCTGGTCGACGTTGCAGCACGCGGTGCC TGAAGTGAAGGTATACACTCCCAATTTCAGCCGGTGCGTGGATTTCTATT GTCTCCATGCAGGGGGCCGGGGGGTGCTGGACGGGATCGAGAAGAACCTT CAGTTGTTACCCGAACACTTGGAGCCGTCGAGGATGACGTTGTATGATTA CGGCAATACCAGCAGCTCGTCGATCTGGTACGAGATGGAGTACATCTGTG AGAAGATGGATCTGAGACGGGGGCAGCGGGTGTTGCAGGTGGCATTTGGG AGTGGATTTAAGTGCAATAGTGCCGTATGGGTGAGCTTGCATGTGTAG back to top
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