jgi.p|Nanoce1779_2|18310, gene_4221 (gene) Nannochloropsis oceanica

Overview
Namejgi.p|Nanoce1779_2|18310
Unique Namegene_4221
Typegene
OrganismNannochloropsis oceanica (N. oceanica CCMP1779)
Alignment locationscaffold_10:42399..44807 +

Link to JBrowse

Properties
Property NameValue
TranscriptId18396
ProteinId18310
Product nameFAE1/Type III polyketide synthase-like protein-domain containing protein
Portal idNanoce1779_2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_10supercontigscaffold_10:42399..44807 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1647142022-03-15
GO annotation for N. oceanica CCMP1779 v22020-03-30
PRJNA2856662019-07-03
PRJNA1578672019-07-02
Gene prediction for N. oceanica CCMP17792008-02-01
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniL021ncniL021Nannochloropsis oceanica (N. oceanica CCMP1779)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO09G03230NO09G03230Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|18310mRNA_4221-proteinNannochloropsis oceanica (N. oceanica CCMP1779)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|18310mRNA_4221Nannochloropsis oceanica (N. oceanica CCMP1779)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of jgi.p|Nanoce1779_2|18310

>mRNA_4221-protein ID=mRNA_4221-protein|Name=jgi.p|Nanoce1779_2|18310|organism=Nannochloropsis oceanica|type=polypeptide|length=572bp
MVELNRAHTFASSSSLASSTSSSPPSTPTAHGLRHNSSSSSLAGSAGGLS
YEDHLSASSYRARPSRFLKLVNWWHMLSVYFPAILYALIAVLVAQLFVDV
SDHGREIKEFVHMVESVKTVGLSLLMKVTPLFILGLWWVTNKHRPIYLVN
FATYKPPQSWKVSQSDVMEIMKRKGCFTEKSLEFMERILTNSGTGPSTAW
PPGILKLLRRKMEKEEGDEAEGLDVDGEDEGEVTADQTEEGAREEAEAVI
YGAVQDVLDKTGVKPKEIDILIINCSLFSPTPSLCAMVAHHFQMRQDVLS
FNLAGMGCSAGLVSIDLAKRLLESRPRSRALVVSTENLTQAFYHGNDRAF
LLQNTLFRCGGAAVLLSNRVQDGLRAKFKLLHVVRSQGTDKHSYDAVYST
QDDEGEKGVRLSKDIVKVAGRLMEKNLTAIGPKVLSVGEMGKAILTLVAR
KACHALRRFFKARGWSTLQHAVPEVKVYTPNFSRCVDFYCLHAGGRGVLD
GIEKNLQLLPEHLEPSRMTLYDYGNTSSSSIWYEMEYICEKMDLRRGQRV
LQVAFGSGFKCNSAVWVSLHV*
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Synonyms
Publications