jgi.p|Nanoce1779_2|537539, mRNA_418 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	jgi.p\|Nanoce1779_2\|537539
Unique Name	mRNA_418
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica CCMP1779)
Sequence length	6282
Alignment location	scaffold_3:1033863..1040259 +

Link to JBrowse

Properties


Property Name	Value
TranscriptId	537625
Track	FilteredModels2
ProteinId	537539

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_3	supercontig	scaffold_3:1033863..1040259 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica CCMP1779	2008-02-01

Annotated Terms

Homology

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|537539	gene_418	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|537539	mRNA_418-protein	Nannochloropsis oceanica (N. oceanica CCMP1779)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CDS_418	CDS_418	Nannochloropsis oceanica (N. oceanica CCMP1779)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at scaffold_3:1033863..1040259+
coding sequence from alignment at scaffold_3:1033863..1040259+

mRNA sequence

>mRNA_418 ID=mRNA_418|Name=jgi.p|Nanoce1779_2|537539|organism=Nannochloropsis oceanica|type=mRNA|length=6282bp
ACAGCATTTAAATTAGCCACTACATCTCTCGAACGACCATGGTTCTTAAG
GTTATTTCCGCCACTTACGGCCACCCCGAGGACGCCACCAAGTCCCTGGA
TGTGACAGCGCAGCTTGCCGGCGCCATCATCGACACCAACGCCGGGGGCA
AGCTCCGCGTGGATGTGAACGCCAAAACATTCGGTAACATTGATCCTGCG
GAGGGTGTGGTTAAGGTTTTAAAAGTCACCTACTCTGTCGCGGAGGGCGG
GGCTGTAGAAGAGGTGGTGACGGAGGAGGGCGCTGCCTTGGAGCTGGCTG
GCAAGGCGCCTCCCCAGGGGACGTTGATGATTCTTGAGGCCAAGTACGGC
GTGTTGGATGATGCGGAGAAATGTATTGATGTCACAGCGCTGGTGCGTGA
TGCGGCCGCGGCCGAAAACAACGAGAAAGTAGCAGTCAAGGTCGATAATA
ACACGATGAAGAGGGACCCGGCTCCCCAAAAGCCCAAGCAGCTCAAGATA
TTTTACCAGGACGGGCCTAGTGGCCCAGTGCGGGAGGTGCTGAGGAACGA
GGGGGAGACCGCAAGCTTTGCTATGGGTGAGACCACCGCTCCTGTACATG
CAGATAAATCTTCGGAAGTAGCGGCTCACGAGGCAGCGACAGGCACCACC
GTGTCAGGCTCCCCTTCGGGCGCGGCTGCGATCGCCTGGAAGTCGACTGA
TGGGCAACTGTTGGCCAATGGTCAGACATTTCGCTTGAAGGGGGTGAACT
GGACGGGGCTCGAAACGGAAGCACGCATGTTAAACGGTCTTGACTCAACA
ACGGGGGCGGCTTATCTTGACCTGTTGGCAAGCTACGGGTTTAATGGGAT
CAAGATTCCAGTCTCGACCACTATGGCGTTGGACATGGACGGGGCGCCTC
GCAAGGCGCCGGATGATGCGGATCTTGCGGGGCTGTCGGCGGGAGACGTA
CTGGCCAAGGTGGTGGAGATGGCGCGTCAACGTGGGATTCACACGGTGTT
GGAGATGGGGAGGATTGACGAGACCCAGCCGACGCCTGATTTGTGGTATG
ATGGCCGGCATTCGGTGGAAGACGTGCAGACTGCCTGGGTCTGCCTCTTG
AATAAGGTCCCGAGGGTGATGGGTGTAAATATTAAGGGGTCTCCGCATGG
GTGTGCTTGCTGGGGGGATTCGAACCCGAGCCAGGATTGGAATAAAGCGG
CGGAGCAGATTGCAAATTTTATCATCGCTAATGTGCCTGGGTATCACGGG
CTGTTTTTGGTAGAGGGCGTTCAAAATGTGGCGAATGTGGATGCAGACAA
TAAAACTATTTTTCCTGCGTGGTATGGTGGGAATTTGCAGGGAGTGACGA
AGCACCCGATTCGGCTGCAGGGGGATGGGAGTGAAAGGGTGGTATATGCC
ACACGGGCGTTTGGGCCCTCGGCGTTTAATCAAGAGTATTTTAACCGAGG
GGACTTCCCGCAATGCATGTGGCAGGTCTGGAGCGATCATTTTGGGTTTT
TGAAGACGACTCAGGGGTCGGCCGTGGTGGTGAGTGAGTTCGGGGATAGC
AATGAGAGCGCGAAGGGGCGAATCTGGTCGAATTGCATAGTAGATTACCT
TACCCAGACCGGCTTGACGAACGCTTTCTATTCGTCAGGGAGTGTGATGG
GAGGGGATTTTAAGAGTCCTGATACCCAGCGGTTAGAGAATTTACAGCGG
CTGCAGGAGAACCCGACCAAGCTGTAAAGCGGCAGCAGAGAGAGGGGATG
GGAGGAGGACGAGAGAGTCAAGGCGAGATGAAACTTGTCATTTTCTTCCT
CTAGTATAACTGTATTGTCCTCCTATCTTTCTGTCGGTATATGTATGTGT
GGATCGATTCTGTCTTCGATCCGTTTTTTTTCTGGGAAATCCTAAATATT
TCGATTGTGAGCGTGCTTTGAAATCTACTTGAATTCCGCGGGTGATAACA
AGGGATGCTAGGTCAAACAAGTGAATGTGAGAGAGGGGAGATAAAAAGAA
TAACAATACATGCGACAGGTAAACATGGTCGAGACGATGAGAGGAGAGCA
GGAGAAATGGATACTCGCCGAAAACAAGAAAGGCGCTGAGAGCACGCGAG
TATGTTGAAAGATGGTCTTTGGCGCAAAGGGCATGGGTCACAACAATGTA
TGGGATACTCTCTATACATGCAATTTCACTGGGACACAATAATGACGGGA
CATACCACAGAGGCACGGAGGGGCATGCAGCTGCCATTATTAGATAGCAA
TAAGATTATAAACGCGACGGGAGTCGATTACAAAAAGACCGTGAACCACA
ATCACGATAAGACATACCACAGCAAGACGTTGGTGCATGCCACCGTCAGG
GATCATGGGATAACCAAAAGTATAAAGGAAGAATGGCACGAAAAACGATG
GAGGTAATGTGTGTCTGTGTGTACGCGTTTGAATCAAGGAATAGCTGAAG
CAGAGAGGAGCTGTACCTCTAGTGTTTCCTAGTTTTCTTTTAGTTCATGC
TTACACGCAAATTATGGAAGACGTGTGTCTGTAAGGGAAGAAGAGAGTGA
AAATTTTCGGGGCGAGACAACGCTTGAATTACATACGGGCAAACTTCGCC
TCCGAGCGTCAAAATCATAGCATTTCAAATTACTTTATCTGTCTTTTCCT
GCTTTGCTTTGACTCAATACTTTGACAAGATGCTTTTGCTTTGATTCAGT
GCTTAAATCCAGTTCTCCTCACTTTCCTCTCTCTTCCCTCTCTACCTCAC
TCTCCCCACTACCTGCACTTCTGTCAGCGAAAATCGCCCTTGCCATTGCT
TTCTCCAAAATTGCCTGTTCCTGATCTTCCTCTTGGTGAGACGGCAAAAA
AGCAAAATGCAACACACCCTCTGGGACTTCCGAGGGTAAGAATTCTTCGC
CTGGGCAGATTTTCCCGAAAAGCGTTTGGGCTTGCGTGAGGGGGGAGTGG
AGATAGAACTCGGAAGCGTCCCGGTGGATGAAGAGGGCGTTCTTTTTGGG
CAGGGGAGGCGCGGTGAAGAAAGAAGATGATGAGAACGACGCGTTTTGAA
CAATTTCTTCTTCACCCGGGCTGGGGATGATTGGTTCTAAAGGAAGCTCG
TACGTCACGGCCCAAAGCACATTATCCTCCGGGCTCCCTACAAGCGCATG
GGTTGCGGCCGCCAGAAGCTCTACAGCGGCATCGGTGCTACCGCTGATGG
TGCTGTCGCGGCATTTGTATGTGATGGTGGAAAGATACAGAATGTAAATC
CCCTGAGGGGCACAGCGGGCGGCAGGGTCGACGCAGTAAAAATGGACAGT
GGGGTGTGGGTGAGAGGAGGGCAACGCGCCTGTTGCTGCCAGATATTCCG
CCAGATTTCCCGGCGGTATAACGCCGCCACAGTGCTTTGCCGTGCTGCTA
CTGTCACTGTTGATGCTGCTGTCGCTGGCCACTGCTCCCGCTGCTCCTCC
TATCGCTTCCTTCCCTACCAACAAACCAGCCGGGGGGCGGTCCAACAACA
CAATCCGTCGGACCACCGACCTCACCTTCCTGCTATCCCTCCCTCCCTCC
AATCTCCATCCCTCCGGCACATTTCCCACCCCAAAAACCACATACTCACA
TGCCACCGCCCCTCCTTTTCTGTCCATCACCCCCAAGCAGTTCCCCGTCG
TCGGGTGGAGCACTACCCCCGCCGGCTGCTCCCGCAATAAATACGTCGCT
CCCCACACAGAAGCAGTCCGGCAAAACGCCTGCGTCACGTCCCCCCCTCC
AAATAAAGGCCATAAAAACGCCGTCTTCCCATATCGTCCCAAGCCTTGCA
GATGACCCCACACCCTCTTGAGCCCCTCCTCCGTTGTTGCCATCAACTCC
CCTCCCTCCGTCCCGCCCTTCCCCTCCGAATCTACCACCAACAACGCCAA
TGCATGTATAACCACCCACTGCAAATGACCCTCCATTCTTTGAAAATTCA
AAAACTCCTTAAAAGGTCTGTCTAAAAAATTGTCAATTCCTTCCATATCC
ACCTTGGCTTTATTCTGGGGTCGCTGCAACGATCGCCCTTGTCCTAACTC
CACTTCATTTCTCAGTTGGGGCGTTTTACCGCTCTGGGAACGAAACCCCC
AGTCCGCGACGAGCTGAAGGAACTTCATGAGTTGCCTTTTTTCCTTGGCA
GGAAGGAGGTGTGTGGCAAAGACGTCGGGTTTGGAGCAAGGGACTTGGTA
GAAGGCGAGAGATGGAGGAGGGTTGGGGATTGCGGTGCTGCAGCCGGAAG
AAGAGGAGGAGGAAGCAAACGACGACTCGGGAGGGGGCGTGATGCTGCTG
CTACTACTGTTTATGTTGCTATTGTTGCTACAGGAGGGGGAAACGAGGGA
ACGCGAGGCGATGTAAAATGCTTGGAAGGGTCGGAACTCGAGGTAGTTGG
CAACGCCTGACGAGAGGAGGGGGCCCAACATATCGCTGCCCGCCATGAGC
ACTACAGGGCTTAAGTCAATGTTGAACTCGCGGGACTTAGCCAGCAAAGC
GGGTATATCCCATACAGACGTGGCTTCTTGATTTGTTGTTTTGATAGCCG
GTTGTGATGGTGAGGGAGGAGCGGAGCGTGGCGAAGTGTCTGCGTCTTGG
TCTACTCCGCCCTTGGCTGCTATTGCGGGTACATTTTCTGTTACCCGTGA
TGGCGGTTGCTCTGGCTGTACAACCGGTGCCGTACCTGGCCTTTCGAATG
TTTGCAGCACACGAATGCTGGTAAGTGCTGTCTGAGGAAGGGGCACGACC
CAGCTATGAGCAGGGGCTTCGGGATTGATCGCGTCAGCTGGCTTATTTTT
TCCCGCTCCTACATGTGATATGTCCTCCTCTTTCTCTTTCTCCTTGTTCT
TCCCCTTCTTCTTCTTCTTCTTCTTCTTTGTCTTCTGTCTCTTCTCCTTC
TTATCCTCCTCCTCCTCCTCCTCTCCCTCCTCTCCCTCCTCCTCTTCCCC
CGCCTCTTCTTCCTCATTCTCTTCCTCCTTCTCTTCCCTCTTATCTTCCT
TTCCCCCATCCTCCTCTATGGCCTCTTGATCTATCCCGCCTGCTGTGCGC
CATCGAATCGAGGGCCATTGTCGTTGCAGTACGGGTGGAGTGGGGCGGAG
CTCTGCCGGTGCAGCGGCACTAGTGCCAGTCCGTTGGCCCTGATGACAAT
GTGCCTCGGCCCAAGTCCGCAAATCGTCCAAGCGAAAGGAAGGCCAGTCC
TCTCCTCCGTAGTAATCGTGCTTCTCGTAGTGCAATACGCTTTTCCCCAC
CTTGGTCAAGGCAGCAGCCAGCATGGCCTCGACCAAGCCCGTCCCGATAA
TCACAACGTCGTAATAATGCTCCAGGCCATCGTCCCGGGGCGCAATCGGT
TTGGGCCCCGCAGGCATTTTATTCTGAGGTCTGGGAGGCACGACCACTCT
GTGCGTAGGGTGTAGAAGGGGGGGGTAAAGGTGTCGTGAGACAGCGATCA
TGATGTTCTAGCTCATCCCCGCGCATGCTTCTTGCCTCGCCCAAAAGTTG
CCGCGAGCGATTTCCATTCCGACCGCGCACATAACATACCATGTCTCTTC
ATACAAATACACTGCGCATAGTCGCACACACATGAAGCGGAAACAAGGTT
ATGGCCTCGCAGTGCTGCTGCGCGGAACGGCGGCGTGCCGTACAGCTCCA
AGACAACCTCCTCCCCTGCCCCAGCGGTCCCAACCCCTATCTACTACTAG
CCCCACTCCTGGCCCCCTGCAAGGCCTGCGGGTTTTAGACTTGACGCGCG
TGCTGGCAGGCCCCTTTGCGACCATGGCGTTGGGCGATTTGGGCGCGGAT
GTAATTAAGATCGAGCATCCGCAGCGTGGGGACGACACCCGGGCTTGGGG
GCCGCCTTTTGTGGGAGGAGAGAGTGCGTACTTCTTGAGCGTAAACCGGA
ACAAACGAAGCGTCGGCGTGGATTTCAAGCAATCCGAGGGCTTGGAGATT
GTGCGGCGACTGGCGTCGGAATCAGATGTGCTAATCGAGAACTTCTTGCC
GGGGAAATTGGAGAAAGCTGGGTTGGGCTATGATGTCCTGAGTGAGCTGA
ATCCGCGTCTTATCTATTGCAGCATAACCGGATTTGGCAGTGACGGAATT
GCGGCACAACGTCCAGGGTATGACGTGATTATGCAGGGAATGTATGGATT
GATGAGTATCACGGGCTCGCCGTCGGACGAGGGTGGTGAGCCTGCCAAGA
CAGGCGTGGCGATGGTGGATCTGGCCACGGGTCTCTTCGCACACGGAGCC
ATCCTGGCTGCCCTTCACGGCCGGCATCAGAC

protein sequence of jgi.p|Nanoce1779_2|537539

>mRNA_418-protein ID=mRNA_418-protein|Name=jgi.p|Nanoce1779_2|537539|organism=Nannochloropsis oceanica|type=polypeptide|length=563bp
MVLKVISATYGHPEDATKSLDVTAQLAGAIIDTNAGGKLRVDVNAKTFGN
IDPAEGVVKVLKVTYSVAEGGAVEEVVTEEGAALELAGKAPPQGTLMILE
AKYGVLDDAEKCIDVTALVRDAAAAENNEKVAVKVDNNTMKRDPAPQKPK
QLKIFYQDGPSGPVREVLRNEGETASFAMGETTAPVHADKSSEVAAHEAA
TGTTVSGSPSGAAAIAWKSTDGQLLANGQTFRLKGVNWTGLETEARMLNG
LDSTTGAAYLDLLASYGFNGIKIPVSTTMALDMDGAPRKAPDDADLAGLS
AGDVLAKVVEMARQRGIHTVLEMGRIDETQPTPDLWYDGRHSVEDVQTAW
VCLLNKVPRVMGVNIKGSPHGCACWGDSNPSQDWNKAAEQIANFIIANVP
GYHGLFLVEGVQNVANVDADNKTIFPAWYGGNLQGVTKHPIRLQGDGSER
VVYATRAFGPSAFNQEYFNRGDFPQCMWQVWSDHFGFLKTTQGSAVVVSE
FGDSNESAKGRIWSNCIVDYLTQTGLTNAFYSSGSVMGGDFKSPDTQRLE
NLQRLQENPTKL*

mRNA from alignment at scaffold_3:1033863..1040259+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_418 ID=mRNA_418|Name=jgi.p|Nanoce1779_2|537539|organism=Nannochloropsis oceanica|type=mRNA|length=6397bp|location=Sequence derived from alignment at scaffold_3:1033863..1040259+ (Nannochloropsis oceanica)
ACAGCATTTAAATTAGCCACTACATCTCTCGAACGACCATGGTTCTTAAG
GTTATTTCCGCCACTTACGGCCACCCCGAGGACGCCACCAAGTCCCTGGA
TGTGACAGCGCAGCTTGCCGGCGCCATCATCGACACCAACGCCGGGGGCA
AGCTCCGCGTGGATGTGAACGCCAAAACATTCGGTAACATTGATCCTGCG
GAGGGTGTGGTTAAGGTTTTAAAAGTCACCTACTCTGTCGCGGAGGGCGG
GGCTGTAGAAGAGGTGGTGACGGAGGAGGGCGCTGCCTTGGAGCTGGCTG
GCAAGGCGCCTCCCCAGGGGACGTTGATGATTCTTGAGGCCAAGTACGGC
GTGTTGGATGATGCGGAGAAATGTATTGATGTCACAGCGCTGGTGCGTGA
TGCGGCCGCGGCCGAAAACAACGAGAAAGTAGCAGTCAAGGTCGATAATA
ACACGATGAAGAGGGACCCGGCTCCCCAAAAGCCCAAGCAGCTCAAGATA
TTTTACCAGGACGGGCCTAGTGGCCCAGTGCGGGAGGTGCTGAGGAACGA
GGGGGAGACCGCAAGCTTTGCTATGGGTGAGACCACCGCTCCTGTACATG
CAGATAAATCTTCGGAAGTAGCGGCTCACGAGGCAGCGACAGGCACCACC
GTGTCAGGCTCCCCTTCGGGCGCGGCTGCGATCGCCTGGAAGTCGACTGA
TGGGCAACTGTTGGCCAATGGTCAGACATTTCGCTTGAAGGGGGTGAACT
GGACGGGGCTCGAAACGGAAGCACGCATGTTAAACGGTCTTGACTCAACA
ACGGGGGCGGCTTATCTTGACCTGTTGGCAAGCTACGGGTTTAATGGGAT
CAAGATTCCAGTCTCGACCACTATGGCGTTGGACATGGACGGGGCGCCTC
GCAAGGCGCCGGATGATGCGGATCTTGCGGGGCTGTCGGCGGGAGACGTA
CTGGCCAAGGTGGTGGAGATGGCGCGTCAACGTGGGATTCACACGGTGTT
GGAGATGGGGAGGATTGACGAGACCCAGCCGACGCCTGATTTGTGGTATG
ATGGCCGGCATTCGGTGGAAGACGTGCAGACTGCCTGGGTCTGCCTCTTG
AATAAGGTCCCGAGGGTGATGGGTGTAAATATTAAGGGGTCTCCGCATGG
GTGTGCTTGCTGGGGGGATTCGAACCCGAGCCAGGATTGGAATAAAGCGG
CGGAGCAGATTGCAAATTTTATCATCGCTAATGTGCCTGGGTATCACGGG
CTGTTTTTGGTAGAGGGCGTTCAAAATGTGGCGAATGTGGATGCAGACAA
TAAAACTATTTTTCCTGCGTGGTATGGTGGGAATTTGCAGGGAGTGACGA
AGCACCCGATTCGGCTGCAGGGGGATGGGAGTGAAAGGGTGGTATATGCC
ACACGGGCGTTTGGGCCCTCGGCGTTTAATCAAGAGTATTTTAACCGAGG
GGACTTCCCGCAATGCATGTGGCAGGTCTGGAGCGATCATTTTGGGTTTT
TGAAGACGACTCAGGGGTCGGCCGTGGTGGTGAGTGAGTTCGGGGATAGC
AATGAGAGCGCGAAGGGGCGAATCTGGTCGAATTGCATAGTAGATTACCT
TACCCAGACCGGCTTGACGAACGCTTTCTATTCGTCAGGGAGTGTGATGG
GAGGGGATTTTAAGAGTCCTGATACCCAGCGGTTAGAGAATTTACAGCGG
CTGCAGGAGAACCCGACCAAGCTGTAAAGCGGCAGCAGAGAGAGGGGATG
GGAGGAGGACGAGAGAGTCAAGGCGAGATGAAACTTGTCATTTTCTTCCT
CTAGTATAACTGTATTGTCCTCCTATCTTTCTGTCGGTATATGTATGTGT
GGATCGATTCTGTCTTCGATCCGTTTTTTTTCTGGGAAATCCTAAATATT
TCGATTGTGAGCGTGCTTTGAAATCTACTTGAATTCCGCGGGTGATAACA
AGGGATGCTAGGTCAAACAAGTGAATGTGAGAGAGGGGAGATAAAAAGAA
TAACAATACATGCGACAGGTAAACATGGTCGAGACGATGAGAGGAGAGCA
GGAGAAATGGATACTCGCCGAAAACAAGAAAGGCGCTGAGAGCACGCGAG
TATGTTGAAAGATGGTCTTTGGCGCAAAGGGCATGGGTCACAACAATGTA
TGGGATACTCTCTATACATGCAATTTCACTGGGACACAATAATGACGGGA
CATACCACAGAGGCACGGAGGGGCATGCAGCTGCCATTATTAGATAGCAA
TAAGATTATAAACGCGACGGGAGTCGATTACAAAAAGACCGTGAACCACA
ATCACGATAAGACATACCACAGCAAGACGTTGGTGCATGCCACCGTCAGG
GATCATGGGATAACCAAAAGTATAAAGGAAGAATGGCACGAAAAACGATG
GAGGTAATGTGTGTCTGTGTGTACGCGTTTGAATCAAGGAATAGCTGAAG
CAGAGAGGAGCTGTACCTCTAGTGTTTCCTAGTTTTCTTTTAGTTCATGC
TTACACGCAAATTATGGAAGACGTGTGTCTGTAAGGGAAGAAGAGAGTGA
AAATTTTCGGGGCGAGACAACGCTTGAATTACATACGGGCAAACTTCGCC
TCCGAGCGTCAAAATCATAGCATTTCAAATTACTTTATCTGTCTTTTCCT
GCTTTGCTTTGACTCAATACTTTGACAAGATGCTTTTGCTTTGATTCAGT
GCTTAAATCCAGTTCTCCTCACTTTCCTCTCTCTTCCCTCTCTACCTCAC
TCTCCCCACTACCTGCACTTCTGTCAGCGAAAATCGCCCTTGCCATTGCT
TTCTCCAAAATTGCCTGTTCCTGATCTTCCTCTTGGTGAGACGGCAAAAA
AGCAAAATGCAACACACCCTCTGGGACTTCCGAGGGTAAGAATTCTTCGC
CTGGGCAGATTTTCCCGAAAAGCGTTTGGGCTTGCGTGAGGGGGGAGTGG
AGATAGAACTCGGAAGCGTCCCGGTGGATGAAGAGGGCGTTCTTTTTGGG
CAGGGGAGGCGCGGTGAAGAAAGAAGATGATGAGAACGACGCGTTTTGAA
CAATTTCTTCTTCACCCGGGCTGGGGATGATTGGTTCTAAAGGAAGCTCG
TACGTCACGGCCCAAAGCACATTATCCTCCGGGCTCCCTACAAGCGCATG
GGTTGCGGCCGCCAGAAGCTCTACAGCGGCATCGGTGCTACCGCTGATGG
TGCTGTCGCGGCATTTGTATGTGATGGTGGAAAGATACAGAATGTAAATC
CCCTGAGGGGCACAGCGGGCGGCAGGGTCGACGCAGTAAAAATGGACAGT
GGGGTGTGGGTGAGAGGAGGGCAACGCGCCTGTTGCTGCCAGATATTCCG
CCAGATTTCCCGGCGGTATAACGCCGCCACAGTGCTTTGCCGTGCTGCTA
CTGTCACTGTTGATGCTGCTGTCGCTGGCCACTGCTCCCGCTGCTCCTCC
TATCGCTTCCTTCCCTACCAACAAACCAGCCGGGGGGCGGTCCAACAACA
CAATCCGTCGGACCACCGACCTCACCTTCCTGCTATCCCTCCCTCCCTCC
AATCTCCATCCCTCCGGCACATTTCCCACCCCAAAAACCACATACTCACA
TGCCACCGCCCCTCCTTTTCTGTCCATCACCCCCAAGCAGTTCCCCGTCG
TCGGGTGGAGCACTACCCCCGCCGGCTGCTCCCGCAATAAATACGTCGCT
CCCCACACAGAAGCAGTCCGGCAAAACGCCTGCGTCACGTCCCCCCCTCC
AAATAAAGGCCATAAAAACGCCGTCTTCCCATATCGTCCCAAGCCTTGCA
GATGACCCCACACCCTCTTGAGCCCCTCCTCCGTTGTTGCCATCAACTCC
CCTCCCTCCGTCCCGCCCTTCCCCTCCGAATCTACCACCAACAACGCCAA
TGCATGTATAACCACCCACTGCAAATGACCCTCCATTCTTTGAAAATTCA
AAAACTCCTTAAAAGGTCTGTCTAAAAAATTGTCAATTCCTTCCATATCC
ACCTTGGCTTTATTCTGGGGTCGCTGCAACGATCGCCCTTGTCCTAACTC
CACTTCATTTCTCAGTTGGGGCGTTTTACCGCTCTGGGAACGAAACCCCC
AGTCCGCGACGAGCTGAAGGAACTTCATGAGTTGCCTTTTTTCCTTGGCA
GGAAGGAGGTGTGTGGCAAAGACGTCGGGTTTGGAGCAAGGGACTTGGTA
GAAGGCGAGAGATGGAGGAGGGTTGGGGATTGCGGTGCTGCAGCCGGAAG
AAGAGGAGGAGGAAGCAAACGACGACTCGGGAGGGGGCGTGATGCTGCTG
CTACTACTGTTTATGTTGCTATTGTTGCTACAGGAGGGGGAAACGAGGGA
ACGCGAGGCGATGTAAAATGCTTGGAAGGGTCGGAACTCGAGGTAGTTGG
CAACGCCTGACGAGAGGAGGGGGCCCAACATATCGCTGCCCGCCATGAGC
ACTACAGGGCTTAAGTCAATGTTGAACTCGCGGGACTTAGCCAGCAAAGC
GGGTATATCCCATACAGACGTGGCTTCTTGATTTGTTGTTTTGATAGCCG
GTTGTGATGGTGAGGGAGGAGCGGAGCGTGGCGAAGTGTCTGCGTCTTGG
TCTACTCCGCCCTTGGCTGCTATTGCGGGTACATTTTCTGTTACCCGTGA
TGGCGGTTGCTCTGGCTGTACAACCGGTGCCGTACCTGGCCTTTCGAATG
TTTGCAGCACACGAATGCTGGTAAGTGCTGTCTGAGGAAGGGGCACGACC
CAGCTATGAGCAGGGGCTTCGGGATTGATCGCGTCAGCTGGCTTATTTTT
TCCCGCTCCTACATGTGATATGTCCTCCTCTTTCTCTTTCTCCTTGTTCT
TCCCCTTCTTCTTCTTCTTCTTCTTCTTTGTCTTCTGTCTCTTCTCCTTC
TTATCCTCCTCCTCCTCCTCCTCTCCCTCCTCTCCCTCCTCCTCTTCCCC
CGCCTCTTCTTCCTCATTCTCTTCCTCCTTCTCTTCCCTCTTATCTTCCT
TTCCCCCATCCTCCTCTATGGCCTCTTGATCTATCCCGCCTGCTGTGCGC
CATCGAATCGAGGGCCATTGTCGTTGCAGTACGGGTGGAGTGGGGCGGAG
CTCTGCCGGTGCAGCGGCACTAGTGCCAGTCCGTTGGCCCTGATGACAAT
GTGCCTCGGCCCAAGTCCGCAAATCGTCCAAGCGAAAGGAAGGCCAGTCC
TCTCCTCCGTAGTAATCGTGCTTCTCGTAGTGCAATACGCTTTTCCCCAC
CTTGGTCAAGGCAGCAGCCAGCATGGCCTCGACCAAGCCCGTCCCGATAA
TCACAACGTCGTAATAATGCTCCAGGCCATCGTCCCGGGGCGCAATCGGT
TTGGGCCCCGCAGGCATTTTATTCTGAGGTCTGGGAGGCACGACCACTCT
GTGCGTAGGGTGTAGAAGGGGGGGGTAAAGGTGTCGTGAGACAGCGATCA
TGATGTTCTAGCTCATCCCCGCGCATGCTTCTTGCCTCGCCCAAAAGTTG
CCGCGAGCGATTTCCATTCCGACCGCGCACATAACATACCATGTCTCTTC
ATACAAATACACTGCGCATAGTCGCACACACATGAAGCGGAAACAAGGTT
ATGGCCTCGCAGTGCTGCTGCGCGGAACGGCGGCGTGCCGTACAGCTCCA
AGACAACCTCCTCCCCTGCCCCAGCGGTCCCAACCCCTATCTACTACTAG
CCCCACTCCTGGCCCCCTGCAAGGCCTGCGGGTTTTAGACTTGACGCGCG
TGCTGGCAGGCCCCTTTGCGACCATGGCGTTGGGCGATTTGGGCGCGGAT
GTAATTAAGATCGAGCATCCGCAGCGTGGGGACGACACCCGGGCTTGGGG
GCCGCCTTTTGTGGGAGGAGAGAGTGCGTACTTCTTGAGCGTAAACCGGA
ACAAACGAAGCGTCGGCGTGGATTTCAAGCAATCCGAGGGCTTGGAGATT
GTGCGGCGACTGGCGTCGGAATCAGATGTGCTAATCGAGAACTTCTTGCC
GGGGAAATTGGAGAAAGCTGGGTTGGGCTATGATGTCCTGAGTGAGCTGA
ATCCGCGTCTTATCTATTGCAGCATAACCGGATTTGGCAGTGACGGAATT
GCGGCACAACGTCCAGGGTATGACGTGATTATGCAGGGAATGTATGGATT
GATGAGTATCACGGGCTCGCCGTCGGACGAGGGTGGTGAGCCTGCCAAGA
CAGGTGTGTACGTAGGGTAGGGGGTTATTTCTCTTCTCATTTTAAACGCG
AAACCTACCCCAAAAGACTCACTCCTTCCCTTCTCGCCTCTTCTATCACA
ATCTACACAAACATGCAGGCGTGGCGATGGTGGATCTGGCCACGGGTCTC
TTCGCACACGGAGCCATCCTGGCTGCCCTTCACGGCCGGCATCAGAC

Coding sequence (CDS) from alignment at scaffold_3:1033863..1040259+

>mRNA_418 ID=mRNA_418|Name=jgi.p|Nanoce1779_2|537539|organism=Nannochloropsis oceanica|type=CDS|length=1689bp|location=Sequence derived from alignment at scaffold_3:1033863..1040259+ (Nannochloropsis oceanica)
ATGGTTCTTAAGGTTATTTCCGCCACTTACGGCCACCCCGAGGACGCCAC
CAAGTCCCTGGATGTGACAGCGCAGCTTGCCGGCGCCATCATCGACACCA
ACGCCGGGGGCAAGCTCCGCGTGGATGTGAACGCCAAAACATTCGGTAAC
ATTGATCCTGCGGAGGGTGTGGTTAAGGTTTTAAAAGTCACCTACTCTGT
CGCGGAGGGCGGGGCTGTAGAAGAGGTGGTGACGGAGGAGGGCGCTGCCT
TGGAGCTGGCTGGCAAGGCGCCTCCCCAGGGGACGTTGATGATTCTTGAG
GCCAAGTACGGCGTGTTGGATGATGCGGAGAAATGTATTGATGTCACAGC
GCTGGTGCGTGATGCGGCCGCGGCCGAAAACAACGAGAAAGTAGCAGTCA
AGGTCGATAATAACACGATGAAGAGGGACCCGGCTCCCCAAAAGCCCAAG
CAGCTCAAGATATTTTACCAGGACGGGCCTAGTGGCCCAGTGCGGGAGGT
GCTGAGGAACGAGGGGGAGACCGCAAGCTTTGCTATGGGTGAGACCACCG
CTCCTGTACATGCAGATAAATCTTCGGAAGTAGCGGCTCACGAGGCAGCG
ACAGGCACCACCGTGTCAGGCTCCCCTTCGGGCGCGGCTGCGATCGCCTG
GAAGTCGACTGATGGGCAACTGTTGGCCAATGGTCAGACATTTCGCTTGA
AGGGGGTGAACTGGACGGGGCTCGAAACGGAAGCACGCATGTTAAACGGT
CTTGACTCAACAACGGGGGCGGCTTATCTTGACCTGTTGGCAAGCTACGG
GTTTAATGGGATCAAGATTCCAGTCTCGACCACTATGGCGTTGGACATGG
ACGGGGCGCCTCGCAAGGCGCCGGATGATGCGGATCTTGCGGGGCTGTCG
GCGGGAGACGTACTGGCCAAGGTGGTGGAGATGGCGCGTCAACGTGGGAT
TCACACGGTGTTGGAGATGGGGAGGATTGACGAGACCCAGCCGACGCCTG
ATTTGTGGTATGATGGCCGGCATTCGGTGGAAGACGTGCAGACTGCCTGG
GTCTGCCTCTTGAATAAGGTCCCGAGGGTGATGGGTGTAAATATTAAGGG
GTCTCCGCATGGGTGTGCTTGCTGGGGGGATTCGAACCCGAGCCAGGATT
GGAATAAAGCGGCGGAGCAGATTGCAAATTTTATCATCGCTAATGTGCCT
GGGTATCACGGGCTGTTTTTGGTAGAGGGCGTTCAAAATGTGGCGAATGT
GGATGCAGACAATAAAACTATTTTTCCTGCGTGGTATGGTGGGAATTTGC
AGGGAGTGACGAAGCACCCGATTCGGCTGCAGGGGGATGGGAGTGAAAGG
GTGGTATATGCCACACGGGCGTTTGGGCCCTCGGCGTTTAATCAAGAGTA
TTTTAACCGAGGGGACTTCCCGCAATGCATGTGGCAGGTCTGGAGCGATC
ATTTTGGGTTTTTGAAGACGACTCAGGGGTCGGCCGTGGTGGTGAGTGAG
TTCGGGGATAGCAATGAGAGCGCGAAGGGGCGAATCTGGTCGAATTGCAT
AGTAGATTACCTTACCCAGACCGGCTTGACGAACGCTTTCTATTCGTCAG
GGAGTGTGATGGGAGGGGATTTTAAGAGTCCTGATACCCAGCGGTTAGAG
AATTTACAGCGGCTGCAGGAGAACCCGACCAAGCTGTAA

Synonyms

Publications